RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ZNF131P52739 623 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 MORC3Q14149 939 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 KCNB1Q14721 858 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 NFRKBQ6P4R8 1299 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 RUFY4Q6ZNE9 571 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 SMYD4Q8IYR2 804 aaPredicted RBP21.26■□□□□ 0.99
PSPC1-203ENST00000471658 LINC01465Q8N7H1 131 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 ASAP3Q8TDY4 903 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 TIPINQ9BVW5 301 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 SLC39A2Q9NP94 309 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 STARD7Q9NQZ5 370 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 GTF2IRD1Q9UHL9 959 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 GDAQ9Y2T3 454 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 COL4A3BPQ9Y5P4 624 aa21.26■□□□□ 0.99
PSPC1-203ENST00000471658 MAGEB2O15479 319 aa21.25■□□□□ 0.99
PSPC1-203ENST00000471658 STK4Q13043 487 aa21.25■□□□□ 0.99
PSPC1-203ENST00000471658 SASS6Q6UVJ0 657 aa21.25■□□□□ 0.99
PSPC1-203ENST00000471658 KSR1Q8IVT5 923 aa21.25■□□□□ 0.99
PSPC1-203ENST00000471658 DIS3LQ8TF46 1054 aaKnown RBP21.25■□□□□ 0.99
PSPC1-203ENST00000471658 FUCA2Q9BTY2 467 aa21.25■□□□□ 0.99
PSPC1-203ENST00000471658 PARVGQ9HBI0 331 aa21.25■□□□□ 0.99
PSPC1-203ENST00000471658 PCDHA2Q9Y5H9 948 aa21.25■□□□□ 0.99
PSPC1-203ENST00000471658 MBLAC1A4D2B0 266 aaPredicted RBP21.24■□□□□ 0.99
PSPC1-203ENST00000471658 PEX3P56589 373 aa21.24■□□□□ 0.99
PSPC1-203ENST00000471658 PRPF31Q8WWY3 499 aaKnown RBP21.24■□□□□ 0.99
PSPC1-203ENST00000471658 KIFAP3Q92845 792 aa21.24■□□□□ 0.99
PSPC1-203ENST00000471658 ZNF668Q96K58 619 aaPredicted RBP21.24■□□□□ 0.99
PSPC1-203ENST00000471658 DRC1Q96MC2 740 aa21.24■□□□□ 0.99
PSPC1-203ENST00000471658 FIZ1Q96SL8 496 aa21.24■□□□□ 0.99
PSPC1-203ENST00000471658 TMEM106CQ9BVX2 250 aa21.24■□□□□ 0.99
PSPC1-203ENST00000471658 RMND1Q9NWS8 449 aa21.24■□□□□ 0.99
PSPC1-203ENST00000471658 SUCLA2Q9P2R7 463 aaPredicted RBP21.24■□□□□ 0.99
PSPC1-203ENST00000471658 RBAK-RBAKDNI3L0D1 243 aa21.23■□□□□ 0.99
PSPC1-203ENST00000471658 PLS3P13797 630 aa21.23■□□□□ 0.99
PSPC1-203ENST00000471658 GLRA2P23416 452 aa21.23■□□□□ 0.99
PSPC1-203ENST00000471658 NMT1P30419 496 aaKnown RBP21.23■□□□□ 0.99
PSPC1-203ENST00000471658 NLRP12P59046 1061 aa21.23■□□□□ 0.99
PSPC1-203ENST00000471658 TYRO3Q06418 890 aa21.23■□□□□ 0.99
PSPC1-203ENST00000471658 ODR4Q5SWX8 454 aa21.23■□□□□ 0.99
PSPC1-203ENST00000471658 IER5Q5VY09 327 aa21.23■□□□□ 0.99
PSPC1-203ENST00000471658 SESTD1Q86VW0 696 aa21.23■□□□□ 0.99
PSPC1-203ENST00000471658 EXOC8Q8IYI6 725 aa21.23■□□□□ 0.99
PSPC1-203ENST00000471658 KIAA0319LQ8IZA0 1049 aa21.23■□□□□ 0.99
PSPC1-203ENST00000471658 RETREG2Q8NC44 543 aa21.23■□□□□ 0.99
PSPC1-203ENST00000471658 KIAA0895Q8NCT3 520 aa21.23■□□□□ 0.99
PSPC1-203ENST00000471658 CCDC47Q96A33 483 aaKnown RBP21.23■□□□□ 0.99
PSPC1-203ENST00000471658 CTAGE1Q96RT6 745 aa21.23■□□□□ 0.99
PSPC1-203ENST00000471658 JPH2Q9BR39 696 aaPredicted RBP21.23■□□□□ 0.99
PSPC1-203ENST00000471658 SENP6Q9GZR1 1112 aaPredicted RBP21.23■□□□□ 0.99
PSPC1-203ENST00000471658 DNAH12Q6ZR08 3092 aa21.23■□□□□ 0.99
PSPC1-203ENST00000471658 GNAT1P11488 350 aa21.22■□□□□ 0.99
PSPC1-203ENST00000471658 CYP2C9P11712 490 aa21.22■□□□□ 0.99
PSPC1-203ENST00000471658 GAP43P17677 238 aa21.22■□□□□ 0.99
PSPC1-203ENST00000471658 FAM26FQ5R3K3 315 aa21.22■□□□□ 0.99
PSPC1-203ENST00000471658 SLC43A3Q8NBI5 491 aa21.22■□□□□ 0.99
PSPC1-203ENST00000471658 PPP1R16BQ96T49 567 aa21.22■□□□□ 0.99
PSPC1-203ENST00000471658 KIFC3Q9BVG8 833 aa21.22■□□□□ 0.99
PSPC1-203ENST00000471658 FAM49AQ9H0Q0 323 aaPredicted RBP21.22■□□□□ 0.99
PSPC1-203ENST00000471658 MAPK8IP1Q9UQF2 711 aa21.22■□□□□ 0.99
PSPC1-203ENST00000471658 TRIP12Q14669 1992 aaPredicted RBP21.22■□□□□ 0.99
PSPC1-203ENST00000471658 KAT6AQ92794 2004 aa21.22■□□□□ 0.99
PSPC1-203ENST00000471658 A0A0U1RQG5 324 aaPredicted RBP21.22■□□□□ 0.99
PSPC1-203ENST00000471658 VTNP04004 478 aa21.22■□□□□ 0.99
PSPC1-203ENST00000471658 CD44P16070 742 aaKnown RBP21.22■□□□□ 0.99
PSPC1-203ENST00000471658 NPTX2P47972 431 aa21.22■□□□□ 0.99
PSPC1-203ENST00000471658 CASP5P51878 434 aa21.22■□□□□ 0.99
PSPC1-203ENST00000471658 DPCR1Q3MIW9 517 aa21.22■□□□□ 0.99
PSPC1-203ENST00000471658 ZNF658Q5TYW1 1059 aaPredicted RBP21.22■□□□□ 0.99
PSPC1-203ENST00000471658 TCP11Q8WWU5 503 aa21.22■□□□□ 0.99
PSPC1-203ENST00000471658 TRMT13Q9NUP7 481 aaKnown RBP21.22■□□□□ 0.99
PSPC1-203ENST00000471658 EVPLQ92817 2033 aa21.21■□□□□ 0.99
PSPC1-203ENST00000471658 ARVCFO00192 962 aa21.21■□□□□ 0.99
PSPC1-203ENST00000471658 SLC16A4O15374 487 aa21.21■□□□□ 0.99
PSPC1-203ENST00000471658 GAS2O43903 313 aaKnown RBP21.21■□□□□ 0.99
PSPC1-203ENST00000471658 MYBP10242 640 aa21.21■□□□□ 0.99
PSPC1-203ENST00000471658 DNM2P50570 870 aa21.21■□□□□ 0.99
PSPC1-203ENST00000471658 LAMTOR4Q0VGL1 99 aa21.21■□□□□ 0.99
PSPC1-203ENST00000471658 CAPSQ13938 189 aa21.21■□□□□ 0.99
PSPC1-203ENST00000471658 RHPN2Q8IUC4 686 aa21.21■□□□□ 0.99
PSPC1-203ENST00000471658 TRIML1Q8N9V2 468 aa21.21■□□□□ 0.99
PSPC1-203ENST00000471658 DNAJB3Q8WWF6 145 aa21.21■□□□□ 0.99
PSPC1-203ENST00000471658 PSPC1Q8WXF1 523 aaKnown RBP21.21■□□□□ 0.99
PSPC1-203ENST00000471658 WNT8BQ93098 351 aa21.21■□□□□ 0.99
PSPC1-203ENST00000471658 MRPL44Q9H9J2 332 aaKnown RBP21.21■□□□□ 0.99
PSPC1-203ENST00000471658 LARSQ9P2J5 1176 aaKnown RBP21.21■□□□□ 0.99
PSPC1-203ENST00000471658 AKT3Q9Y243 479 aa21.21■□□□□ 0.99
PSPC1-203ENST00000471658 ADGRA3Q8IWK6 1321 aa21.2■□□□□ 0.98
PSPC1-203ENST00000471658 CCDC169A6NNP5 214 aa21.2■□□□□ 0.98
PSPC1-203ENST00000471658 TMOD1P28289 359 aa21.2■□□□□ 0.98
PSPC1-203ENST00000471658 ATN1P54259 1190 aaPredicted RBP21.2■□□□□ 0.98
PSPC1-203ENST00000471658 ZNF445P59923 1031 aa21.2■□□□□ 0.98
PSPC1-203ENST00000471658 TMEM62Q0P6H9 643 aa21.2■□□□□ 0.98
PSPC1-203ENST00000471658 PSMD2Q13200 908 aa21.2■□□□□ 0.98
PSPC1-203ENST00000471658 PTGISQ16647 500 aa21.2■□□□□ 0.98
PSPC1-203ENST00000471658 ZC2HC1CQ53FD0 456 aaPredicted RBP21.2■□□□□ 0.98
PSPC1-203ENST00000471658 LRSAM1Q6UWE0 723 aa21.2■□□□□ 0.98
PSPC1-203ENST00000471658 FAM178BQ8IXR5 827 aa21.2■□□□□ 0.98
PSPC1-203ENST00000471658 IFT74Q96LB3 600 aa21.2■□□□□ 0.98
PSPC1-203ENST00000471658 TRPV6Q9H1D0 765 aa21.2■□□□□ 0.98
PSPC1-203ENST00000471658 SMIM35A0A1B0GVV1 85 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms