RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 KRBA1A5PL33 1030 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 HBP1O60381 514 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 LRRN2O75325 713 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 SP9P0CG40 484 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 RXRAP19793 462 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 CRYBB1P53674 252 aaPredicted RBP7.83□□□□□ -1.16
HDAC1-204ENST00000471488 NLRP11P59045 1033 aaKnown RBP7.83□□□□□ -1.16
HDAC1-204ENST00000471488 TBC1D8BQ0IIM8 1120 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 PTPN14Q15678 1187 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 LETM2Q2VYF4 491 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 CLLU1OSQ5K130 101 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 SWSAP1Q6NVH7 229 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 PLPPR4Q7Z2D5 763 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 HEATR3Q7Z4Q2 680 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 ECHDC2Q86YB7 292 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 C1orf210Q8IVY1 113 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 LRRC71Q8N4P6 559 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 GPR152Q8TDT2 470 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 NLRP7Q8WX94 980 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 SECISBP2LQ93073 1101 aaKnown RBP7.83□□□□□ -1.16
HDAC1-204ENST00000471488 MAP7D2Q96T17 732 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 FOXQ1Q9C009 403 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 ELAC1Q9H777 363 aaKnown RBP7.83□□□□□ -1.16
HDAC1-204ENST00000471488 PIDD1Q9HB75 910 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 JADE2Q9NQC1 790 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 ZNF302Q9NR11 478 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 KCNH7Q9NS40 1196 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 SPATA6Q9NWH7 488 aaPredicted RBP7.83□□□□□ -1.16
HDAC1-204ENST00000471488 SAMM50Q9Y512 469 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 UBIAD1Q9Y5Z9 338 aa7.83□□□□□ -1.16
HDAC1-204ENST00000471488 LAMA4Q16363 1823 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 DNAH14Q0VDD8 3507 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 GVINP1Q7Z2Y8 2422 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 CSDE1O75534 798 aaKnown RBP7.82□□□□□ -1.16
HDAC1-204ENST00000471488 PLEKHA8P1O95397 391 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 SPATA31D3P0C874 917 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 NT5C2P49902 561 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 ATXN1P54253 815 aaKnown RBP7.82□□□□□ -1.16
HDAC1-204ENST00000471488 AK2P54819 239 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 CSTF1Q05048 431 aaKnown RBP7.82□□□□□ -1.16
HDAC1-204ENST00000471488 COL9A3Q14050 684 aaPredicted RBP7.82□□□□□ -1.16
HDAC1-204ENST00000471488 UBXN2BQ14CS0 331 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 LPAL2Q16609 132 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 VARS2Q5ST30 1063 aaKnown RBP7.82□□□□□ -1.16
HDAC1-204ENST00000471488 KIAA0319Q5VV43 1072 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 SPATA31D4Q6ZUB0 917 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 GET4Q7L5D6 327 aaPredicted RBP7.82□□□□□ -1.16
HDAC1-204ENST00000471488 GPR149Q86SP6 731 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 TMEM173Q86WV6 379 aaPredicted RBP7.82□□□□□ -1.16
HDAC1-204ENST00000471488 ATRIPQ8WXE1 791 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 LPPQ93052 612 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 MXRA8Q9BRK3 442 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 DSCC1Q9BVC3 393 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 EMILIN2Q9BXX0 1053 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 MRPL9Q9BYD2 267 aaKnown RBP7.82□□□□□ -1.16
HDAC1-204ENST00000471488 ZBP1Q9H171 429 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 ARHGEF3Q9NR81 526 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 RNF19AQ9NV58 838 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 DLL3Q9NYJ7 618 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 IGSF9Q9P2J2 1179 aa7.82□□□□□ -1.16
HDAC1-204ENST00000471488 FRYLO94915 3013 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 EP300Q09472 2414 aaPredicted RBP7.81□□□□□ -1.16
HDAC1-204ENST00000471488 CCDC195A0A1B0GUA6 201 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 POTEMA6NI47 508 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 CCDC69A6NI79 296 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 HIP1O00291 1037 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 PIK3CDO00329 1044 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 MAFGO15525 162 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 LAMTOR5O43504 91 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 TMOD1P28289 359 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 FAM189BP81408 668 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 ITGB3BPQ13352 177 aaPredicted RBP7.81□□□□□ -1.16
HDAC1-204ENST00000471488 GIT2Q14161 759 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 ZNF484Q5JVG2 852 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 TWF2Q6IBS0 349 aaKnown RBP7.81□□□□□ -1.16
HDAC1-204ENST00000471488 EFCAB12Q6NXP0 572 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 MIS18BP1Q6P0N0 1132 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 DCLRE1AQ6PJP8 1040 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 POTEGQ6S5H5 508 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 PPFIBP1Q86W92 1011 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 GLYCTKQ8IVS8 523 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 CCDC60Q8IWA6 550 aaPredicted RBP7.81□□□□□ -1.16
HDAC1-204ENST00000471488 SLC44A3Q8N4M1 653 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 SLC22A17Q8WUG5 538 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 SMG7Q92540 1137 aaKnown RBP7.81□□□□□ -1.16
HDAC1-204ENST00000471488 STAMQ92783 540 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 FAM193BQ96PV7 902 aaPredicted RBP7.81□□□□□ -1.16
HDAC1-204ENST00000471488 AGO4Q9HCK5 861 aaKnown RBP7.81□□□□□ -1.16
HDAC1-204ENST00000471488 MAN1C1Q9NR34 630 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 WNT16Q9UBV4 365 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 CACNA1GO43497 2377 aa7.81□□□□□ -1.16
HDAC1-204ENST00000471488 NCOR2Q9Y618 2525 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 N4BP1O75113 896 aaKnown RBP7.8□□□□□ -1.16
HDAC1-204ENST00000471488 GPR32O75388 356 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 C22orf31O95567 290 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 CTSAP10619 480 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 SRFP11831 508 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 SDHBP21912 280 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 SLC26A2P50443 739 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 NAPAP54920 295 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms