RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 RMDN2Q96LZ7 410 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 FAM167BQ9BTA0 163 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 LRP5O75197 1615 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 COL4A1P02462 1669 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 COL22A1Q8NFW1 1626 aaPredicted RBP17.9■□□□□ 0.46
HOXB3-205ENST00000470495 KLRG2A4D1S0 409 aaPredicted RBP17.9■□□□□ 0.46
HOXB3-205ENST00000470495 TFRCP02786 760 aaKnown RBP17.9■□□□□ 0.46
HOXB3-205ENST00000470495 GAP43P17677 238 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 TNFAIP3P21580 790 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 TUBB4BP68371 445 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 CXCL9Q07325 125 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 SUGP1Q8IWZ8 645 aaKnown RBP17.9■□□□□ 0.46
HOXB3-205ENST00000470495 C3orf20Q8ND61 904 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 LXNQ9BS40 222 aa17.9■□□□□ 0.46
HOXB3-205ENST00000470495 LSM1O15116 133 aaKnown RBP17.89■□□□□ 0.45
HOXB3-205ENST00000470495 PPFIA4O75335 1185 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 ATP1A1P05023 1023 aaKnown RBP17.89■□□□□ 0.45
HOXB3-205ENST00000470495 CLTAP09496 248 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 EHHADHQ08426 723 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 WRNIP1Q96S55 665 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 ATP6V1G1O75348 118 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 FTCDO95954 541 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 RPA1P27694 616 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 STAT1P42224 750 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 VPS41P49754 854 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 CORO7P57737 925 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 SF3A3Q12874 501 aaKnown RBP eCLIP17.89■□□□□ 0.45
HOXB3-205ENST00000470495 ECM1Q16610 540 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 IRF2BP1Q8IU81 584 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 TMEM139Q8IV31 216 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 CEP63Q96MT8 703 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 PSMC2P35998 433 aaKnown RBP17.89■□□□□ 0.45
HOXB3-205ENST00000470495 RPS6KA3P51812 740 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 MTMR2Q13614 643 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 LONRF2Q1L5Z9 754 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 RMDN3Q96TC7 470 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 MAF1Q9H063 256 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 MYOZ2Q9NPC6 264 aa17.89■□□□□ 0.45
HOXB3-205ENST00000470495 UTP6Q9NYH9 597 aaKnown RBP17.89■□□□□ 0.45
HOXB3-205ENST00000470495 LRRC10BA6NIK2 292 aa17.88■□□□□ 0.45
HOXB3-205ENST00000470495 YDJCA8MPS7 323 aa17.88■□□□□ 0.45
HOXB3-205ENST00000470495 LRRN2O75325 713 aa17.88■□□□□ 0.45
HOXB3-205ENST00000470495 C8orf74Q6P047 294 aa17.88■□□□□ 0.45
HOXB3-205ENST00000470495 MICALL2Q8IY33 904 aa17.88■□□□□ 0.45
HOXB3-205ENST00000470495 GMCL1P1Q8NEA9 526 aa17.88■□□□□ 0.45
HOXB3-205ENST00000470495 DUSP10Q9Y6W6 482 aa17.88■□□□□ 0.45
HOXB3-205ENST00000470495 ZHX2Q9Y6X8 837 aa17.88■□□□□ 0.45
HOXB3-205ENST00000470495 MEIS2O14770 477 aa17.88■□□□□ 0.45
HOXB3-205ENST00000470495 GFPT2O94808 682 aa17.88■□□□□ 0.45
HOXB3-205ENST00000470495 ACTN1P12814 892 aa17.88■□□□□ 0.45
HOXB3-205ENST00000470495 C2orf54Q08AI8 447 aa17.88■□□□□ 0.45
HOXB3-205ENST00000470495 MTMR1Q13613 665 aa17.88■□□□□ 0.45
HOXB3-205ENST00000470495 ZC2HC1CQ53FD0 456 aaPredicted RBP17.88■□□□□ 0.45
HOXB3-205ENST00000470495 KLHL7Q8IXQ5 586 aa17.88■□□□□ 0.45
HOXB3-205ENST00000470495 BRD3Q15059 726 aa17.88■□□□□ 0.45
HOXB3-205ENST00000470495 AS3MTQ9HBK9 375 aa17.88■□□□□ 0.45
HOXB3-205ENST00000470495 SREBF1P36956 1147 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 MKL1Q969V6 931 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 PAGR1Q9BTK6 254 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 GLIS2Q9BZE0 524 aaPredicted RBP17.87■□□□□ 0.45
HOXB3-205ENST00000470495 TMX2Q9Y320 296 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 HYOU1Q9Y4L1 999 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 BTAF1O14981 1849 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 IGKV6D-41A0A0C4DH26 115 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 EYA4O95677 639 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 CAP2P40123 477 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 RNF207Q6ZRF8 634 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 SELENOOQ9BVL4 669 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 RUSC1Q9BVN2 902 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 MMADHCQ9H3L0 296 aaPredicted RBP17.87■□□□□ 0.45
HOXB3-205ENST00000470495 THEMIS2Q5TEJ8 643 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 PPP4R3CPQ6ZMV5 832 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 FAM204AQ9H8W3 233 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 PNMA2Q9UL42 364 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 C4BP0C0L5 1744 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 TBX3O15119 743 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 SERPING1P05155 500 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 PADI6Q6TGC4 694 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 CDAN1Q8IWY9 1227 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 ZNF232Q9UNY5 417 aa17.87■□□□□ 0.45
HOXB3-205ENST00000470495 SWT1Q5T5J6 900 aaKnown RBP17.86■□□□□ 0.45
HOXB3-205ENST00000470495 CEP72Q9P209 647 aa17.86■□□□□ 0.45
HOXB3-205ENST00000470495 DDX60Q8IY21 1712 aaKnown RBP17.86■□□□□ 0.45
HOXB3-205ENST00000470495 GOLGA8IPA6NC78 632 aa17.86■□□□□ 0.45
HOXB3-205ENST00000470495 GOLGA8JA6NMD2 632 aa17.86■□□□□ 0.45
HOXB3-205ENST00000470495 NCK2O43639 380 aa17.86■□□□□ 0.45
HOXB3-205ENST00000470495 ABL1P00519 1130 aa17.86■□□□□ 0.45
HOXB3-205ENST00000470495 APBA1Q02410 837 aa17.86■□□□□ 0.45
HOXB3-205ENST00000470495 TMEM119Q4V9L6 283 aa17.86■□□□□ 0.45
HOXB3-205ENST00000470495 ZC3H12AQ5D1E8 599 aaKnown RBP17.86■□□□□ 0.45
HOXB3-205ENST00000470495 SIX5Q8N196 739 aa17.86■□□□□ 0.45
HOXB3-205ENST00000470495 ERGIC2Q96RQ1 377 aa17.86■□□□□ 0.45
HOXB3-205ENST00000470495 KCNK3O14649 394 aa17.86■□□□□ 0.45
HOXB3-205ENST00000470495 ARP10275 920 aa17.86■□□□□ 0.45
HOXB3-205ENST00000470495 RPS6KA1Q15418 735 aa17.86■□□□□ 0.45
HOXB3-205ENST00000470495 LMBR1Q8WVP7 490 aa17.86■□□□□ 0.45
HOXB3-205ENST00000470495 LACRTQ9GZZ8 138 aa17.86■□□□□ 0.45
HOXB3-205ENST00000470495 RPAP3Q9H6T3 665 aaPredicted RBP17.86■□□□□ 0.45
HOXB3-205ENST00000470495 CNOT7Q9UIV1 285 aaKnown RBP17.86■□□□□ 0.45
HOXB3-205ENST00000470495 ZBTB39O15060 712 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms