RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 RIN2Q8WYP3 895 aaPredicted RBP10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 RSPH1Q8WYR4 309 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 RRP36Q96EU6 259 aaKnown RBP10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 CHAMP1Q96JM3 812 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 MRPL9Q9BYD2 267 aaKnown RBP10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 SFXN1Q9H9B4 322 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 JADE2Q9NQC1 790 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 PKD2L1Q9P0L9 805 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 NCDNQ9UBB6 729 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 STK39Q9UEW8 545 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 SEC63Q9UGP8 760 aaKnown RBP10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 SIT1Q9Y3P8 196 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 IRAK3Q9Y616 596 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 NCOR2Q9Y618 2525 aa10.14□□□□□ -0.79
SYNGAP1-205ENST00000470232 SALL3Q9BXA9 1300 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 SPDYE3A6NKU9 549 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 HIP1O00291 1037 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 MEIS2O14770 477 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 CYTH3O43739 400 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 CFHP08603 1231 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 SP9P0CG40 484 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 ITGB5P18084 799 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 SDSP20132 328 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 SART3Q15020 963 aaKnown RBP10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 ZNF484Q5JVG2 852 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 FAM160B1Q5W0V3 765 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 PHLDB3Q6NSJ2 640 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 ELMSAN1Q6PJG2 1045 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 CATIPQ7Z7H3 387 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 HSCBQ8IWL3 235 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 RASEFQ8IZ41 740 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 KIAA0319LQ8IZA0 1049 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 SLC39A11Q8N1S5 342 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 DCLK2Q8N568 766 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 PIBF1Q8WXW3 757 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 STAMQ92783 540 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 PCYT2Q99447 389 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 DSCC1Q9BVC3 393 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 EMILIN2Q9BXX0 1053 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 PSTPIP2Q9H939 334 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 CDHR5Q9HBB8 845 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 DPP7Q9UHL4 492 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 UBIAD1Q9Y5Z9 338 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 COL1A2P08123 1366 aa10.13□□□□□ -0.79
SYNGAP1-205ENST00000470232 NFASCO94856 1347 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 ACACBO00763 2458 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 IFIT3O14879 490 aaKnown RBP10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 CTSAP10619 480 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 EPCAMP16422 314 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 PBX3P40426 434 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 METAP2P50579 478 aaKnown RBP eCLIP10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 BCAR1P56945 870 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 ACTR2P61160 394 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 DSC3Q14574 896 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 WTAPQ15007 396 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 LETM2Q2VYF4 491 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 SPECC1Q5M775 1068 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 VARS2Q5ST30 1063 aaKnown RBP10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 CWC27Q6UX04 472 aaKnown RBP10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 CYP26C1Q6V0L0 522 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 C15orf39Q6ZRI6 1047 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 DDX53Q86TM3 631 aaKnown RBP10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 FAM228AQ86W67 206 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 CHD1LQ86WJ1 897 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 ECHDC2Q86YB7 292 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 RNF169Q8NCN4 708 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 SLC22A17Q8WUG5 538 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 OSMRQ99650 979 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 LZTS2Q9BRK4 669 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 RTKNQ9BST9 563 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 LNPKQ9C0E8 428 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 TBC1D17Q9HA65 648 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 DIAPH3Q9NSV4 1193 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 CDV3Q9UKY7 258 aaKnown RBP10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 CA14Q9ULX7 337 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 CACNA1GO43497 2377 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 CEP250Q9BV73 2442 aa10.12□□□□□ -0.79
SYNGAP1-205ENST00000470232 ZFHX4Q86UP3 3567 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 BACH1O14867 736 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 SPTLC1O15269 473 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 DCNP07585 359 aaKnown RBP10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 SRFP11831 508 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 KLRC2P26717 231 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 TMOD1P28289 359 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 SMARCA1P28370 1054 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 GBP2P32456 591 aaPredicted RBP10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 KIF5BP33176 963 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 ATXN1P54253 815 aaKnown RBP10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 LMNB2Q03252 620 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 KIZQ2M2Z5 673 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 ZNF528Q3MIS6 628 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 KANK3Q6NY19 840 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 METTL13Q8N6R0 699 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 TMEM40Q8WWA1 233 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 ATRIPQ8WXE1 791 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 SHDQ96IW2 340 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 DCBLD2Q96PD2 775 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 ZBP1Q9H171 429 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 KCNH7Q9NS40 1196 aa10.11□□□□□ -0.79
SYNGAP1-205ENST00000470232 DACT1Q9NYF0 836 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms