RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 GNAT1P11488 350 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 MTHFD1P11586 935 aaKnown RBP5.57□□□□□ -1.52
COL3A1-205ENST00000470167 CNGA1P29973 690 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 HOXC12P31275 282 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 SLC8A1P32418 973 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 CETN2P41208 172 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 TUFMP49411 452 aaKnown RBP5.57□□□□□ -1.52
COL3A1-205ENST00000470167 PLOD1Q02809 727 aaPredicted RBP5.57□□□□□ -1.52
COL3A1-205ENST00000470167 UBXN1Q04323 297 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 IDI1Q13907 227 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 STK11Q15831 433 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 SNCBQ16143 134 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 WSCD2Q2TBF2 565 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 ANO4Q32M45 955 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 FUT11Q495W5 492 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 SETMARQ53H47 684 aaPredicted RBP5.57□□□□□ -1.52
COL3A1-205ENST00000470167 TMTC4Q5T4D3 741 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 TUBA3EQ6PEY2 450 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 ZER1Q7Z7L7 766 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 CCDC84Q86UT8 332 aaPredicted RBP5.57□□□□□ -1.52
COL3A1-205ENST00000470167 FCHSD1Q86WN1 690 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 TBC1D21Q8IYX1 336 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 CADM3Q8N126 398 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 SCAIQ8N9R8 606 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 BBOF1Q8ND07 529 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 CCDC112Q8NEF3 446 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 SNX29Q8TEQ0 813 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 KIFAP3Q92845 792 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 CHFRQ96EP1 664 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 ACSBG1Q96GR2 724 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 ZCCHC2Q9C0B9 1178 aaKnown RBP5.57□□□□□ -1.52
COL3A1-205ENST00000470167 CLSTN2Q9H4D0 955 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 ACAD9Q9H845 621 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 SCPEP1Q9HB40 452 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 CAPN10Q9HC96 672 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 ATP13A1Q9HD20 1204 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 AAASQ9NRG9 546 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 STRN4Q9NRL3 753 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 SUCLA2Q9P2R7 463 aaPredicted RBP5.57□□□□□ -1.52
COL3A1-205ENST00000470167 PPARGC1AQ9UBK2 798 aaKnown RBP5.57□□□□□ -1.52
COL3A1-205ENST00000470167 VTI1BQ9UEU0 232 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 FNDC3AQ9Y2H6 1198 aaKnown RBP5.57□□□□□ -1.52
COL3A1-205ENST00000470167 FHAD1B1AJZ9 1412 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 ERBINQ96RT1 1412 aa5.57□□□□□ -1.52
COL3A1-205ENST00000470167 ELP1O95163 1332 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 KDM2BQ8NHM5 1336 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 THOC2Q8NI27 1593 aaKnown RBP5.56□□□□□ -1.52
COL3A1-205ENST00000470167 ARHGAP10A1A4S6 786 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 ANO9A1A5B4 782 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 DCDC2BA2VCK2 349 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 A8MVJ9 347 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 AP3B1O00203 1094 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 KMOO15229 486 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 ZBTB43O43298 467 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 STX6O43752 255 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 SORBS3O60504 671 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 PHACTR2O75167 634 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 XYLBO75191 536 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 ALDH1L1O75891 902 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 FGF18O76093 207 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 DDHD2O94830 711 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 ECDO95905 644 aaPredicted RBP5.56□□□□□ -1.52
COL3A1-205ENST00000470167 SERPINC1P01008 464 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 P4HA1P13674 534 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 NAGAP17050 411 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 CTRB1P17538 263 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 IL32P24001 234 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 GNA15P30679 374 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 EVI2BP34910 448 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 IRS1P35568 1242 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 CHKAP35790 457 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 CBX5P45973 191 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 PPM1FP49593 454 aaPredicted RBP5.56□□□□□ -1.52
COL3A1-205ENST00000470167 SEPHS1P49903 392 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 SERPINB8P50452 374 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 THOP1P52888 689 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 PDE1BQ01064 536 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 CAP1Q01518 475 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 E2F2Q14209 437 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 LRRC41Q15345 812 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 OASLQ15646 514 aaKnown RBP5.56□□□□□ -1.52
COL3A1-205ENST00000470167 GPR162Q16538 588 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 EFHC2Q5JST6 749 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 ZBTB41Q5SVQ8 909 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 ZNF362Q5T0B9 420 aaPredicted RBP5.56□□□□□ -1.52
COL3A1-205ENST00000470167 SAMD5Q5TGI4 173 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 SNX30Q5VWJ9 437 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 ANO1Q5XXA6 986 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 CTRB2Q6GPI1 263 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 OR7E24Q6IFN5 339 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 DRICH1Q6PGQ1 229 aaPredicted RBP5.56□□□□□ -1.52
COL3A1-205ENST00000470167 SARM1Q6SZW1 724 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 RIPOR1Q6ZS17 1223 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 C1orf122Q6ZSJ8 110 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 SRGAP1Q7Z6B7 1085 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 GALNT5Q7Z7M9 940 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 EXOC3L1Q86VI1 746 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 NLRP8Q86W28 1048 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 CEP112Q8N8E3 955 aa5.56□□□□□ -1.52
COL3A1-205ENST00000470167 ZNF540Q8NDQ6 660 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms