RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 TBC1D22BQ9NU19 505 aa13.05□□□□□ -0.32
FAM228B-203ENST00000469867 RAPGEFL1Q9UHV5 662 aa13.05□□□□□ -0.32
FAM228B-203ENST00000469867 PYCARDQ9ULZ3 195 aa13.05□□□□□ -0.32
FAM228B-203ENST00000469867 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.04□□□□□ -0.32
FAM228B-203ENST00000469867 GRM6O15303 877 aa13.04□□□□□ -0.32
FAM228B-203ENST00000469867 RPLP2P05387 115 aaKnown RBP13.04□□□□□ -0.32
FAM228B-203ENST00000469867 BMPR1AP36894 532 aa13.04□□□□□ -0.32
FAM228B-203ENST00000469867 KIZQ2M2Z5 673 aa13.04□□□□□ -0.32
FAM228B-203ENST00000469867 TCEAL5Q5H9L2 206 aa13.04□□□□□ -0.32
FAM228B-203ENST00000469867 SPC24Q8NBT2 197 aa13.04□□□□□ -0.32
FAM228B-203ENST00000469867 CCDC148Q8NFR7 591 aa13.04□□□□□ -0.32
FAM228B-203ENST00000469867 ZNF689Q96CS4 500 aaPredicted RBP13.04□□□□□ -0.32
FAM228B-203ENST00000469867 CD320Q9NPF0 282 aa13.04□□□□□ -0.32
FAM228B-203ENST00000469867 EDIL3O43854 480 aa13.04□□□□□ -0.32
FAM228B-203ENST00000469867 VTNP04004 478 aa13.04□□□□□ -0.32
FAM228B-203ENST00000469867 GATMP50440 423 aa13.04□□□□□ -0.32
FAM228B-203ENST00000469867 CRIPAKQ8N1N5 446 aa13.04□□□□□ -0.32
FAM228B-203ENST00000469867 BICD2Q8TD16 824 aa13.04□□□□□ -0.32
FAM228B-203ENST00000469867 KHSRPQ92945 711 aaKnown RBP eCLIP13.04□□□□□ -0.32
FAM228B-203ENST00000469867 CLP1Q92989 425 aaKnown RBP13.04□□□□□ -0.32
FAM228B-203ENST00000469867 C11orf84Q9BUA3 381 aaPredicted RBP13.04□□□□□ -0.32
FAM228B-203ENST00000469867 FTHL17Q9BXU8 183 aa13.04□□□□□ -0.32
FAM228B-203ENST00000469867 TMX1Q9H3N1 280 aa13.04□□□□□ -0.32
FAM228B-203ENST00000469867 GABBR1Q9UBS5 961 aa13.04□□□□□ -0.32
FAM228B-203ENST00000469867 PCDHA10Q9Y5I2 948 aa13.04□□□□□ -0.32
FAM228B-203ENST00000469867 MAFBQ9Y5Q3 323 aaPredicted RBP13.04□□□□□ -0.32
FAM228B-203ENST00000469867 RIOK3O14730 519 aaKnown RBP13.03□□□□□ -0.32
FAM228B-203ENST00000469867 CHMP2AO43633 222 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 COL9A1P20849 921 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 NLRP5P59047 1200 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 TIGD5Q53EQ6 642 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 ZNF746Q6NUN9 644 aaPredicted RBP13.03□□□□□ -0.32
FAM228B-203ENST00000469867 NME8Q8N427 588 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 TMEM87AQ8NBN3 555 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 FBXO18Q8NFZ0 1043 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.03□□□□□ -0.32
FAM228B-203ENST00000469867 C8orf76Q96K31 380 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 OSMRQ99650 979 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 NOC2LQ9Y3T9 749 aaKnown RBP13.03□□□□□ -0.32
FAM228B-203ENST00000469867 SQORQ9Y6N5 450 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 MGEA5O60502 916 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 RPS6KA5O75582 802 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 IL9P15248 144 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 MCTP2Q6DN12 878 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 TRIM22Q8IYM9 498 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 USP28Q96RU2 1077 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 KIF3AQ9Y496 699 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 ATP6V1DQ9Y5K8 247 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 MRPL42Q9Y6G3 142 aaKnown RBP13.03□□□□□ -0.32
FAM228B-203ENST00000469867 KDM3AQ9Y4C1 1321 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 MYH15Q9Y2K3 1946 aa13.03□□□□□ -0.32
FAM228B-203ENST00000469867 C5orf67F2Z3F1 127 aa13.02□□□□□ -0.32
FAM228B-203ENST00000469867 MSH4O15457 936 aa13.02□□□□□ -0.32
FAM228B-203ENST00000469867 C22orf31O95567 290 aa13.02□□□□□ -0.32
FAM228B-203ENST00000469867 PSAPP07602 524 aa13.02□□□□□ -0.32
FAM228B-203ENST00000469867 CIITAP33076 1130 aa13.02□□□□□ -0.32
FAM228B-203ENST00000469867 CLCN3P51790 818 aa13.02□□□□□ -0.32
FAM228B-203ENST00000469867 KRT85P78386 507 aa13.02□□□□□ -0.32
FAM228B-203ENST00000469867 ZNF484Q5JVG2 852 aa13.02□□□□□ -0.32
FAM228B-203ENST00000469867 TBCKQ8TEA7 893 aa13.02□□□□□ -0.32
FAM228B-203ENST00000469867 LEO1Q8WVC0 666 aaPredicted RBP13.02□□□□□ -0.32
FAM228B-203ENST00000469867 ZNF668Q96K58 619 aaPredicted RBP13.02□□□□□ -0.32
FAM228B-203ENST00000469867 KCNF1Q9H3M0 494 aa13.02□□□□□ -0.32
FAM228B-203ENST00000469867 NSUN3Q9H649 340 aaKnown RBP13.02□□□□□ -0.32
FAM228B-203ENST00000469867 EPHX3Q9H6B9 360 aa13.02□□□□□ -0.32
FAM228B-203ENST00000469867 CLDND1Q9NY35 253 aa13.02□□□□□ -0.32
FAM228B-203ENST00000469867 COL4A6Q14031 1691 aa13.02□□□□□ -0.32
FAM228B-203ENST00000469867 MUC6Q6W4X9 2439 aa13.02□□□□□ -0.33
FAM228B-203ENST00000469867 ZNF862O60290 1169 aa13.02□□□□□ -0.33
FAM228B-203ENST00000469867 GTF2F1P35269 517 aaKnown RBP eCLIP13.02□□□□□ -0.335e-6■■■■□ 24.4
FAM228B-203ENST00000469867 SSRP1Q08945 709 aaKnown RBP13.02□□□□□ -0.33
FAM228B-203ENST00000469867 PTCRAQ6ISU1 281 aaPredicted RBP13.02□□□□□ -0.33
FAM228B-203ENST00000469867 NPAS4Q8IUM7 802 aa13.02□□□□□ -0.33
FAM228B-203ENST00000469867 LRRC71Q8N4P6 559 aa13.02□□□□□ -0.33
FAM228B-203ENST00000469867 ADAM2Q99965 735 aa13.02□□□□□ -0.33
FAM228B-203ENST00000469867 DISC1Q9NRI5 854 aa13.02□□□□□ -0.33
FAM228B-203ENST00000469867 LRFN2Q9ULH4 789 aa13.02□□□□□ -0.33
FAM228B-203ENST00000469867 ST3GAL5Q9UNP4 418 aa13.02□□□□□ -0.33
FAM228B-203ENST00000469867 RALGAPA2Q2PPJ7 1873 aa13.02□□□□□ -0.33
FAM228B-203ENST00000469867 DENND3A2RUS2 1198 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 WDR64B1ANS9 1081 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 GAS7O60861 476 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 RB1P06400 928 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 LEXMQ3ZCV2 418 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 PDCL2Q8N4E4 241 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 KCNJ14Q9UNX9 436 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 COL1A2P08123 1366 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 STAG3L1P0CL83 205 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 LIG1P18858 919 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 CAMK1Q14012 370 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 CLUL1Q15846 466 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 UGCGQ16739 394 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 LRCH2Q5VUJ6 765 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 PABPC5Q96DU9 382 aaKnown RBP13.01□□□□□ -0.33
FAM228B-203ENST00000469867 SPATA32Q96LK8 384 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 SH2D3AQ9BRG2 576 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 IGFLR1Q9H665 355 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 SH3GLB2Q9NR46 395 aa13.01□□□□□ -0.33
FAM228B-203ENST00000469867 CGNQ9P2M7 1197 aaKnown RBP13.01□□□□□ -0.33
FAM228B-203ENST00000469867 PLAGL2Q9UPG8 496 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms