RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ABHD4Q8TB40 342 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 DNAAF4Q8WXU2 420 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 C9orf78Q9NZ63 289 aaPredicted RBP7.73□□□□□ -1.17
PTCD3-208ENST00000469585 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.73□□□□□ -1.17
PTCD3-208ENST00000469585 FBLN5Q9UBX5 448 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 PCDHA8Q9Y5H6 950 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 ZBED9Q6R2W3 1325 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 COL24A1Q17RW2 1714 aa7.72□□□□□ -1.17
PTCD3-208ENST00000469585 CACNA1FO60840 1977 aa7.72□□□□□ -1.17
PTCD3-208ENST00000469585 TCERG1O14776 1098 aaKnown RBP7.72□□□□□ -1.17
PTCD3-208ENST00000469585 DNAJC8O75937 253 aaPredicted RBP7.72□□□□□ -1.17
PTCD3-208ENST00000469585 SDSP20132 328 aa7.72□□□□□ -1.17
PTCD3-208ENST00000469585 CHRNA5P30532 468 aa7.72□□□□□ -1.17
PTCD3-208ENST00000469585 CCDC93Q567U6 631 aa7.72□□□□□ -1.17
PTCD3-208ENST00000469585 TAF7LQ5H9L4 462 aa7.72□□□□□ -1.17
PTCD3-208ENST00000469585 SUSD4Q5VX71 490 aa7.72□□□□□ -1.17
PTCD3-208ENST00000469585 FTSJ3Q8IY81 847 aaKnown RBP7.72□□□□□ -1.17
PTCD3-208ENST00000469585 RTKN2Q8IZC4 609 aa7.72□□□□□ -1.17
PTCD3-208ENST00000469585 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.72□□□□□ -1.17
PTCD3-208ENST00000469585 SUPT20HQ8NEM7 779 aa7.72□□□□□ -1.17
PTCD3-208ENST00000469585 PLEKHO2Q8TD55 490 aa7.72□□□□□ -1.17
PTCD3-208ENST00000469585 CDC5LQ99459 802 aaKnown RBP7.72□□□□□ -1.17
PTCD3-208ENST00000469585 API5Q9BZZ5 524 aaKnown RBP7.72□□□□□ -1.17
PTCD3-208ENST00000469585 RNF32Q9H0A6 362 aa7.72□□□□□ -1.17
PTCD3-208ENST00000469585 CRTAC1Q9NQ79 661 aa7.72□□□□□ -1.17
PTCD3-208ENST00000469585 PDLIM7Q9NR12 457 aa7.72□□□□□ -1.17
PTCD3-208ENST00000469585 PPARGC1AQ9UBK2 798 aaKnown RBP7.72□□□□□ -1.17
PTCD3-208ENST00000469585 GPR160Q9UJ42 338 aa7.72□□□□□ -1.17
PTCD3-208ENST00000469585 RWDD3Q9Y3V2 267 aa7.72□□□□□ -1.17
PTCD3-208ENST00000469585 PCDHA9Q9Y5H5 950 aa7.72□□□□□ -1.17
PTCD3-208ENST00000469585 NUP98P52948 1817 aa7.71□□□□□ -1.17
PTCD3-208ENST00000469585 PXDNLA1KZ92 1463 aa7.71□□□□□ -1.18
PTCD3-208ENST00000469585 ARVCFO00192 962 aa7.71□□□□□ -1.18
PTCD3-208ENST00000469585 IRS4O14654 1257 aaPredicted RBP7.71□□□□□ -1.18
PTCD3-208ENST00000469585 RASGRP1O95267 797 aa7.71□□□□□ -1.18
PTCD3-208ENST00000469585 SRGNP10124 158 aa7.71□□□□□ -1.18
PTCD3-208ENST00000469585 GALK1P51570 392 aa7.71□□□□□ -1.18
PTCD3-208ENST00000469585 RBM10P98175 930 aaKnown RBP7.71□□□□□ -1.18
PTCD3-208ENST00000469585 GUCY1A3Q02108 690 aa7.71□□□□□ -1.18
PTCD3-208ENST00000469585 KIZQ2M2Z5 673 aa7.71□□□□□ -1.18
PTCD3-208ENST00000469585 CEP68Q76N32 757 aa7.71□□□□□ -1.18
PTCD3-208ENST00000469585 NBPF11Q86T75 865 aa7.71□□□□□ -1.18
PTCD3-208ENST00000469585 NIM1KQ8IY84 436 aa7.71□□□□□ -1.18
PTCD3-208ENST00000469585 C16orf71Q8IYS4 520 aaPredicted RBP7.71□□□□□ -1.18
PTCD3-208ENST00000469585 LINS1Q8NG48 757 aa7.71□□□□□ -1.18
PTCD3-208ENST00000469585 KIRREL1Q96J84 757 aa7.71□□□□□ -1.18
PTCD3-208ENST00000469585 CHMP4BQ9H444 224 aaKnown RBP7.71□□□□□ -1.18
PTCD3-208ENST00000469585 MARCH2Q9P0N8 246 aa7.71□□□□□ -1.18
PTCD3-208ENST00000469585 ZNF521Q96K83 1311 aa7.71□□□□□ -1.18
PTCD3-208ENST00000469585 TCRBV16S1A1N1A0A5B0 115 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 PDE8AO60658 829 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 ALDH1L1O75891 902 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 BBOX1O75936 387 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 NTSR2O95665 410 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 PCCAP05165 728 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-208ENST00000469585 PNLIPP16233 465 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 NAT1P18440 290 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 FPR2P25090 351 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 IGHMBP2P38935 993 aaKnown RBP7.7□□□□□ -1.18
PTCD3-208ENST00000469585 CCT4P50991 539 aaKnown RBP7.7□□□□□ -1.18
PTCD3-208ENST00000469585 CYP4F8P98187 520 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 TM4SF20Q53R12 229 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 MTDHQ86UE4 582 aaKnown RBP7.7□□□□□ -1.18
PTCD3-208ENST00000469585 TEX2Q8IWB9 1127 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 DHX37Q8IY37 1157 aaKnown RBP7.7□□□□□ -1.18
PTCD3-208ENST00000469585 LZTR1Q8N653 840 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 JDP2Q8WYK2 163 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 FRAT1Q92837 279 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-208ENST00000469585 MFSD3Q96ES6 412 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 FAM89AQ96GI7 184 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 TMEM169Q96HH4 297 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 MAGEB10Q96LZ2 347 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-208ENST00000469585 SLKQ9H2G2 1235 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-208ENST00000469585 TAOK3Q9H2K8 898 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 INTS7Q9NVH2 962 aaKnown RBP7.7□□□□□ -1.18
PTCD3-208ENST00000469585 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.7□□□□□ -1.18
PTCD3-208ENST00000469585 YBX2Q9Y2T7 364 aaKnown RBP7.7□□□□□ -1.18
PTCD3-208ENST00000469585 X6R8D5 127 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 UBN2Q6ZU65 1347 aa7.7□□□□□ -1.18
PTCD3-208ENST00000469585 RIC1Q4ADV7 1423 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 AFDNP55196 1824 aaKnown RBP7.69□□□□□ -1.18
PTCD3-208ENST00000469585 KIF13BQ9NQT8 1826 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 A0A1W2PQ27 194 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 A0A1W2PQ64 194 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 A0A1W2PQC6 194 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 A0A1W2PQD8 194 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 H7BY64 318 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 WNT9AO14904 365 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 PAPLNO95428 1278 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 FUCA1P04066 466 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 ITGB5P18084 799 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 TACR1P25103 407 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 UBE3BQ7Z3V4 1068 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 ANKRD18AQ8IVF6 992 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 SIRT2Q8IXJ6 389 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 PCDH19Q8TAB3 1148 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 CHAMP1Q96JM3 812 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 CRAMP1Q96RY5 1269 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 MPHOSPH8Q99549 860 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 ALG1Q9BT22 464 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms