RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 RUSC1Q9BVN2 902 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 BLZF1Q9H2G9 400 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 CUEDC2Q9H467 287 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 RNPEPQ9H4A4 650 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 CLSTN2Q9H4D0 955 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 TUT1Q9H6E5 874 aaKnown RBP9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 TMEM63CQ9P1W3 806 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 USP25Q9UHP3 1055 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 DBR1Q9UK59 544 aaKnown RBP9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 NPHP3-ACAD11A0A0J9YXS1 232 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 KPNA6O60684 536 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 KRT18P05783 430 aaKnown RBP9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 SMIM10L2AP0DMW4 78 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 SMIM10L2BP0DMW5 78 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 RARRES1P49788 294 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 SLC26A2P50443 739 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 ACLYP53396 1101 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 SLC12A3P55017 1021 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 PPFIA1Q13136 1202 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 POSTNQ15063 836 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 FAM47CQ5HY64 1035 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 CCSAPQ6IQ19 270 aaPredicted RBP9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 SV2BQ7L1I2 683 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 OTUD6AQ7L8S5 288 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 DYMQ7RTS9 669 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 PARP9Q8IXQ6 854 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 ARRDC4Q8NCT1 418 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 U2AF1L4Q8WU68 220 aaKnown RBP9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 ZBTB10Q96DT7 871 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 PAGE5Q96GU1 130 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 CEP170P1Q96L14 293 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 TIGD1Q96MW7 591 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 MTRQ99707 1265 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 KATNAL1Q9BW62 490 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 TNMDQ9H2S6 317 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 MAGEF1Q9HAY2 307 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 CYP26B1Q9NR63 512 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 NRBP2Q9NSY0 501 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 ANKEF1Q9NU02 776 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 KBTBD4Q9NVX7 518 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 TRIP11Q15643 1979 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 COL1A2P08123 1366 aa9.33□□□□□ -0.92
GAPVD1-213ENST00000469498 ANK1P16157 1881 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 A0A1W2PQ45 241 aaPredicted RBP9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 A0A1W2PQY0 241 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 RCCD1A6NED2 376 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 MOXD2PA6NHM9 499 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 MYMKA6NI61 221 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 ZBTB42B2RXF5 422 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 HAS3O00219 553 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 HBP1O60381 514 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 GJB1P08034 283 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 INSRRP14616 1297 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 CYP11B2P19099 503 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 POLGP54098 1239 aaPredicted RBP9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 SOX10P56693 466 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 ASIC1P78348 528 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 MDM2Q00987 491 aaPredicted RBP9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 CUL4BQ13620 913 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 EMC2Q15006 297 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 GRIK4Q16099 956 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 SKOR2Q2VWA4 1001 aaPredicted RBP9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 CCDC183Q5T5S1 534 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 MAEAQ7L5Y9 396 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 SYT2Q8N9I0 419 aaPredicted RBP9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 LMBR1Q8WVP7 490 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 SYAP1Q96A49 352 aaPredicted RBP9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 VTI1AQ96AJ9 217 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 REEP2Q9BRK0 252 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 NIFKQ9BYG3 293 aaKnown RBP9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 ATP6V0A4Q9HBG4 840 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 POLD4Q9HCU8 107 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 OGDHLQ9ULD0 1010 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 PHF24Q9UPV7 400 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 CITO14578 2027 aa9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 PDCD11Q14690 1871 aaKnown RBP9.32□□□□□ -0.92
GAPVD1-213ENST00000469498 LTBP2Q14767 1821 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 RSPH10B2B2RC85 870 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 DNM1LO00429 736 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 TBCAO75347 108 aaKnown RBP9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 SGPL1O95470 568 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 C22orf31O95567 290 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 TFRCP02786 760 aaKnown RBP9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 RSPH10BP0C881 870 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 XRCC6P12956 609 aaKnown RBP eCLIP9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 IDEP14735 1019 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 TBC1D8BQ0IIM8 1120 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 DPYDQ12882 1025 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 TARBP2Q15633 366 aaKnown RBP9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 NBPF20Q3BBV1 942 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 ARSHQ5FYA8 562 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 ZNF484Q5JVG2 852 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 RINT1Q6NUQ1 792 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 KANK3Q6NY19 840 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 C1orf186Q6ZWK4 172 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 SH3RF1Q7Z6J0 888 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 LRRC71Q8N4P6 559 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 KCTD17Q8N5Z5 321 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 C7orf31Q8N865 590 aa9.31□□□□□ -0.92
GAPVD1-213ENST00000469498 DIS3LQ8TF46 1054 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms