RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 JPH2Q9BR39 696 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-204ENST00000469443 LXNQ9BS40 222 aa20.48■□□□□ 0.87
PHGDH-204ENST00000469443 FOXP1Q9H334 677 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-204ENST00000469443 CYP26B1Q9NR63 512 aa20.48■□□□□ 0.87
PHGDH-204ENST00000469443 WRAP73Q9P2S5 460 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-204ENST00000469443 PCDHA12Q9UN75 941 aa20.48■□□□□ 0.87
PHGDH-204ENST00000469443 C9IYK1 514 aa20.47■□□□□ 0.87
PHGDH-204ENST00000469443 C5orf67F2Z3F1 127 aa20.47■□□□□ 0.87
PHGDH-204ENST00000469443 ST18O60284 1047 aa20.47■□□□□ 0.87
PHGDH-204ENST00000469443 RB1P06400 928 aa20.47■□□□□ 0.87
PHGDH-204ENST00000469443 DARSP14868 501 aaKnown RBP20.47■□□□□ 0.87
PHGDH-204ENST00000469443 DSC3Q14574 896 aa20.47■□□□□ 0.87
PHGDH-204ENST00000469443 NLRP7Q8WX94 980 aa20.47■□□□□ 0.87
PHGDH-204ENST00000469443 ZSWIM4Q9H7M6 989 aa20.47■□□□□ 0.87
PHGDH-204ENST00000469443 TTC12Q9H892 705 aaPredicted RBP20.47■□□□□ 0.87
PHGDH-204ENST00000469443 RGL1Q9NZL6 768 aa20.47■□□□□ 0.87
PHGDH-204ENST00000469443 PPME1Q9Y570 386 aa20.47■□□□□ 0.87
PHGDH-204ENST00000469443 SPTBN5Q9NRC6 3674 aaKnown RBP20.46■□□□□ 0.87
PHGDH-204ENST00000469443 PLXNA4Q9HCM2 1894 aa20.46■□□□□ 0.87
PHGDH-204ENST00000469443 IBSPP21815 317 aaPredicted RBP20.46■□□□□ 0.87
PHGDH-204ENST00000469443 BMPR1AP36894 532 aa20.46■□□□□ 0.87
PHGDH-204ENST00000469443 TXKP42681 527 aa20.46■□□□□ 0.87
PHGDH-204ENST00000469443 NPEPPSP55786 919 aa20.46■□□□□ 0.87
PHGDH-204ENST00000469443 MRPS5P82675 430 aaKnown RBP20.46■□□□□ 0.87
PHGDH-204ENST00000469443 CYP4A11Q02928 519 aa20.46■□□□□ 0.87
PHGDH-204ENST00000469443 PTPROQ16827 1216 aa20.46■□□□□ 0.87
PHGDH-204ENST00000469443 EXOC8Q8IYI6 725 aa20.46■□□□□ 0.87
PHGDH-204ENST00000469443 SYMPKQ92797 1274 aaKnown RBP20.46■□□□□ 0.87
PHGDH-204ENST00000469443 MRPL38Q96DV4 380 aaKnown RBP20.46■□□□□ 0.87
PHGDH-204ENST00000469443 CEP170P1Q96L14 293 aa20.46■□□□□ 0.87
PHGDH-204ENST00000469443 MTMR9Q96QG7 549 aa20.46■□□□□ 0.87
PHGDH-204ENST00000469443 SUCLA2Q9P2R7 463 aaPredicted RBP20.46■□□□□ 0.87
PHGDH-204ENST00000469443 PCDHB7Q9Y5E2 793 aa20.46■□□□□ 0.87
PHGDH-204ENST00000469443 MRPL42Q9Y6G3 142 aaKnown RBP20.46■□□□□ 0.87
PHGDH-204ENST00000469443 ATP2B1P20020 1258 aa20.45■□□□□ 0.86
PHGDH-204ENST00000469443 YWHABP31946 246 aaKnown RBP20.45■□□□□ 0.86
PHGDH-204ENST00000469443 CTTNQ14247 550 aaKnown RBP20.45■□□□□ 0.86
PHGDH-204ENST00000469443 PAN2Q504Q3 1202 aaKnown RBP20.45■□□□□ 0.86
PHGDH-204ENST00000469443 OTUD6AQ7L8S5 288 aa20.45■□□□□ 0.86
PHGDH-204ENST00000469443 NEK9Q8TD19 979 aa20.45■□□□□ 0.86
PHGDH-204ENST00000469443 SLC7A3Q8WY07 619 aa20.45■□□□□ 0.86
PHGDH-204ENST00000469443 ASB2Q96Q27 587 aa20.45■□□□□ 0.86
PHGDH-204ENST00000469443 EIF2AK1Q9BQI3 630 aaKnown RBP20.45■□□□□ 0.86
PHGDH-204ENST00000469443 C11orf84Q9BUA3 381 aaPredicted RBP20.45■□□□□ 0.86
PHGDH-204ENST00000469443 GCOM2Q9BZD3 368 aaPredicted RBP20.45■□□□□ 0.86
PHGDH-204ENST00000469443 TMEM60Q9H2L4 133 aa20.45■□□□□ 0.86
PHGDH-204ENST00000469443 COG5Q9UP83 839 aa20.45■□□□□ 0.86
PHGDH-204ENST00000469443 TTC28Q96AY4 2481 aa20.44■□□□□ 0.86
PHGDH-204ENST00000469443 A0A087WZ62 844 aa20.44■□□□□ 0.86
PHGDH-204ENST00000469443 SLITRK3O94933 977 aa20.44■□□□□ 0.86
PHGDH-204ENST00000469443 ZSCAN20P17040 1043 aaPredicted RBP20.44■□□□□ 0.86
PHGDH-204ENST00000469443 MCM7P33993 719 aa20.44■□□□□ 0.86
PHGDH-204ENST00000469443 RFC5P40937 340 aa20.44■□□□□ 0.86
PHGDH-204ENST00000469443 GATMP50440 423 aa20.44■□□□□ 0.86
PHGDH-204ENST00000469443 POLGP54098 1239 aaPredicted RBP20.44■□□□□ 0.86
PHGDH-204ENST00000469443 FAM189BP81408 668 aa20.44■□□□□ 0.86
PHGDH-204ENST00000469443 ORC2Q13416 577 aaPredicted RBP20.44■□□□□ 0.86
PHGDH-204ENST00000469443 ZNF410Q86VK4 478 aa20.44■□□□□ 0.86
PHGDH-204ENST00000469443 RHPN2Q8IUC4 686 aa20.44■□□□□ 0.86
PHGDH-204ENST00000469443 TPH2Q8IWU9 490 aa20.44■□□□□ 0.86
PHGDH-204ENST00000469443 ZNF579Q8NAF0 562 aaKnown RBP20.44■□□□□ 0.86
PHGDH-204ENST00000469443 FDXACB1Q9BRP7 624 aaPredicted RBP20.44■□□□□ 0.86
PHGDH-204ENST00000469443 DHX33Q9H6R0 707 aaKnown RBP20.44■□□□□ 0.86
PHGDH-204ENST00000469443 ELAC1Q9H777 363 aaKnown RBP20.44■□□□□ 0.86
PHGDH-204ENST00000469443 TMEM161AQ9NX61 479 aa20.44■□□□□ 0.86
PHGDH-204ENST00000469443 XIRP2A4UGR9 3374 aa20.44■□□□□ 0.86
PHGDH-204ENST00000469443 NCOR1O75376 2440 aa20.44■□□□□ 0.86
PHGDH-204ENST00000469443 GNL2Q13823 731 aaKnown RBP20.43■□□□□ 0.86
PHGDH-204ENST00000469443 TIGD5Q53EQ6 642 aa20.43■□□□□ 0.86
PHGDH-204ENST00000469443 HSD17B14Q9BPX1 270 aa20.43■□□□□ 0.86
PHGDH-204ENST00000469443 PLVAPQ9BX97 442 aa20.43■□□□□ 0.86
PHGDH-204ENST00000469443 ATP6V0A4Q9HBG4 840 aa20.43■□□□□ 0.86
PHGDH-204ENST00000469443 ZBTB39O15060 712 aa20.42■□□□□ 0.86
PHGDH-204ENST00000469443 GAS2O43903 313 aaKnown RBP20.42■□□□□ 0.86
PHGDH-204ENST00000469443 LYPLA2O95372 231 aa20.42■□□□□ 0.86
PHGDH-204ENST00000469443 FGFR4P22455 802 aa20.42■□□□□ 0.86
PHGDH-204ENST00000469443 TFF2Q03403 129 aa20.42■□□□□ 0.86
PHGDH-204ENST00000469443 AAK1Q2M2I8 961 aa20.42■□□□□ 0.86
PHGDH-204ENST00000469443 XKR9Q5GH70 373 aa20.42■□□□□ 0.86
PHGDH-204ENST00000469443 FAM102BQ5T8I3 360 aa20.42■□□□□ 0.86
PHGDH-204ENST00000469443 NOSTRINQ8IVI9 506 aa20.42■□□□□ 0.86
PHGDH-204ENST00000469443 P2RX5Q93086 422 aa20.42■□□□□ 0.86
PHGDH-204ENST00000469443 HLA-CQ95604 372 aa20.42■□□□□ 0.86
PHGDH-204ENST00000469443 TMX3Q96JJ7 454 aa20.42■□□□□ 0.86
PHGDH-204ENST00000469443 TBC1D32Q96NH3 1257 aa20.42■□□□□ 0.86
PHGDH-204ENST00000469443 INO80BQ9C086 356 aaPredicted RBP20.42■□□□□ 0.86
PHGDH-204ENST00000469443 LMAN2LQ9H0V9 348 aa20.42■□□□□ 0.86
PHGDH-204ENST00000469443 COL4A3BPQ9Y5P4 624 aa20.42■□□□□ 0.86
PHGDH-204ENST00000469443 POTEMA6NI47 508 aa20.41■□□□□ 0.86
PHGDH-204ENST00000469443 CSDE1O75534 798 aaKnown RBP20.41■□□□□ 0.86
PHGDH-204ENST00000469443 SFPQP23246 707 aaKnown RBP eCLIP20.41■□□□□ 0.86
PHGDH-204ENST00000469443 EMC2Q15006 297 aa20.41■□□□□ 0.86
PHGDH-204ENST00000469443 ZNF174Q15697 407 aa20.41■□□□□ 0.86
PHGDH-204ENST00000469443 NAALADL2Q58DX5 795 aa20.41■□□□□ 0.86
PHGDH-204ENST00000469443 KSR1Q8IVT5 923 aa20.41■□□□□ 0.86
PHGDH-204ENST00000469443 PSPC1Q8WXF1 523 aaKnown RBP20.41■□□□□ 0.86
PHGDH-204ENST00000469443 NLRP4Q96MN2 994 aa20.41■□□□□ 0.86
PHGDH-204ENST00000469443 NOL7Q9UMY1 257 aaKnown RBP20.41■□□□□ 0.86
PHGDH-204ENST00000469443 KIF3AQ9Y496 699 aa20.41■□□□□ 0.86
PHGDH-204ENST00000469443 TBKBP1A7MCY6 615 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms