RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 MFAP3LO75121 409 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 ALDH1L1O75891 902 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 PARP1P09874 1014 aaKnown RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 ACPPP15309 386 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 ZNF24P17028 368 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 POLD1P28340 1107 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 HOXA7P31268 230 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 SSTR4P31391 388 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 ZNF76P36508 570 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 SYKP43405 635 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 GNAQP50148 359 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 NEK2P51955 445 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 CDK17Q00537 523 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 ATP2B2Q01814 1243 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 SULT2A1Q06520 285 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 ITGB3BPQ13352 177 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 PDCLQ13371 301 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 PRPF4BQ13523 1007 aaKnown RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 SNX1Q13596 522 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 CUL1Q13616 776 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 MYBPC3Q14896 1274 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 KRT72Q14CN4 511 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 KARSQ15046 597 aaKnown RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 PARP6Q2NL67 630 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 GNPTABQ3T906 1256 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 PABPC1LQ4VXU2 614 aaKnown RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 ANKRD20A2Q5SQ80 823 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 SOGA3Q5TF21 947 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 ANKRD20A1Q5TYW2 823 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 TTC39BQ5VTQ0 682 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 ANKRD20A3Q5VUR7 823 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 NUTM2GQ5VZR2 741 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 USPL1Q5W0Q7 1092 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 CEP128Q6ZU80 1094 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 ARHGAP27Q6ZUM4 889 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 ACAD11Q709F0 780 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 OTUD6AQ7L8S5 288 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 CLASRPQ8N2M8 674 aaKnown RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 RNF10Q8N5U6 811 aaKnown RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 ZBTB8BQ8NAP8 495 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 GALNT11Q8NCW6 608 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 NSUN7Q8NE18 718 aaKnown RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 IFT81Q8WYA0 676 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 NCSTNQ92542 709 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 KIFAP3Q92845 792 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 CHMP6Q96FZ7 201 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 CATSPER2Q96P56 530 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 NR1H4Q96RI1 486 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 EIF2AQ9BY44 585 aaKnown RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 OSBPL7Q9BZF2 842 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 MRPL18Q9H0U6 180 aaKnown RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 NDST4Q9H3R1 872 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 CCDC134Q9H6E4 229 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 MRPL44Q9H9J2 332 aaKnown RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 RMND1Q9NWS8 449 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 KCNK4Q9NYG8 393 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 TMOD4Q9NZQ9 345 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 SSX2IPQ9Y2D8 614 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 THRAP3Q9Y2W1 955 aaKnown RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 VWDEQ8N2E2 1590 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 CEP170BQ9Y4F5 1589 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-207ENST00000468925 ZMYM6O95789 1325 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 FRMD3A2A2Y4 597 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 MAGEA13PA6NCF6 341 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 LRRC10BA6NIK2 292 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 DNM1LO00429 736 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 CHL1O00533 1208 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 CES2O00748 559 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 SLC27A2O14975 620 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 DDX3YO15523 660 aaKnown RBP5.28□□□□□ -1.56
SF3B1-207ENST00000468925 DIAPH2O60879 1101 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 PFDN1O60925 122 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 TACC1O75410 805 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 LARGE1O95461 756 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 S100BP04271 92 aaPredicted RBP5.28□□□□□ -1.56
SF3B1-207ENST00000468925 NQO1P15559 274 aaKnown RBP5.28□□□□□ -1.56
SF3B1-207ENST00000468925 FSTP19883 344 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 PRKAR2BP31323 418 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 PCK1P35558 622 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 SOX18P35713 384 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 NDUFA8P51970 172 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 TBX4P57082 545 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 PPP2R2AP63151 447 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 ARID5AQ03989 594 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 FMR1Q06787 632 aaKnown RBP eCLIP5.28□□□□□ -1.562e-6■□□□□ 10.5
SF3B1-207ENST00000468925 CCDC15Q0P6D6 951 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 ST3GAL1Q11201 340 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 HYAL2Q12891 473 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 ZBTB17Q13105 803 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 ITGA9Q13797 1035 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 SLC39A14Q15043 492 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 CLUL1Q15846 466 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 INAQ16352 499 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 PPP2R5EQ16537 467 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 CLPPQ16740 277 aaPredicted RBP5.28□□□□□ -1.56
SF3B1-207ENST00000468925 TTMPQ5BVD1 217 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 SPATA1Q5VX52 437 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 CCDC174Q6PII3 467 aa5.28□□□□□ -1.56
SF3B1-207ENST00000468925 HDGFL2Q7Z4V5 671 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms