RNA–Protein interactions for RNA: ENST00000468860.1

ABCD3-204, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 3

Gene ABCD3, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-204ENST00000468860 CYP4A11Q02928 519 aa20.28■□□□□ 0.84
ABCD3-204ENST00000468860 CTTNQ14247 550 aaKnown RBP20.28■□□□□ 0.84
ABCD3-204ENST00000468860 DSC3Q14574 896 aa20.28■□□□□ 0.84
ABCD3-204ENST00000468860 CMTR2Q8IYT2 770 aaKnown RBP20.28■□□□□ 0.84
ABCD3-204ENST00000468860 ATXN2LQ8WWM7 1075 aaKnown RBP20.28■□□□□ 0.84
ABCD3-204ENST00000468860 NLRP7Q8WX94 980 aa20.28■□□□□ 0.84
ABCD3-204ENST00000468860 CLP1Q92989 425 aaKnown RBP20.28■□□□□ 0.84
ABCD3-204ENST00000468860 CEP170P1Q96L14 293 aa20.28■□□□□ 0.84
ABCD3-204ENST00000468860 TBC1D32Q96NH3 1257 aa20.28■□□□□ 0.84
ABCD3-204ENST00000468860 SCLT1Q96NL6 688 aa20.28■□□□□ 0.84
ABCD3-204ENST00000468860 PCDHB7Q9Y5E2 793 aa20.28■□□□□ 0.84
ABCD3-204ENST00000468860 C5orf67F2Z3F1 127 aa20.27■□□□□ 0.84
ABCD3-204ENST00000468860 SLITRK3O94933 977 aa20.27■□□□□ 0.84
ABCD3-204ENST00000468860 RB1P06400 928 aa20.27■□□□□ 0.84
ABCD3-204ENST00000468860 MCM7P33993 719 aa20.27■□□□□ 0.84
ABCD3-204ENST00000468860 CTNNB1P35222 781 aa20.27■□□□□ 0.84
ABCD3-204ENST00000468860 BMPR1AP36894 532 aa20.27■□□□□ 0.84
ABCD3-204ENST00000468860 GPM6BQ13491 265 aa20.27■□□□□ 0.84
ABCD3-204ENST00000468860 SKIV2LQ15477 1246 aaKnown RBP20.27■□□□□ 0.84
ABCD3-204ENST00000468860 OTUD6AQ7L8S5 288 aa20.27■□□□□ 0.84
ABCD3-204ENST00000468860 EXOC8Q8IYI6 725 aa20.27■□□□□ 0.84
ABCD3-204ENST00000468860 ZNF579Q8NAF0 562 aaKnown RBP20.27■□□□□ 0.84
ABCD3-204ENST00000468860 NEK9Q8TD19 979 aa20.27■□□□□ 0.84
ABCD3-204ENST00000468860 SLC7A3Q8WY07 619 aa20.27■□□□□ 0.84
ABCD3-204ENST00000468860 EIF2AK1Q9BQI3 630 aaKnown RBP20.27■□□□□ 0.84
ABCD3-204ENST00000468860 COL25A1Q9BXS0 654 aaPredicted RBP20.27■□□□□ 0.84
ABCD3-204ENST00000468860 TMEM60Q9H2L4 133 aa20.27■□□□□ 0.84
ABCD3-204ENST00000468860 DHX33Q9H6R0 707 aaKnown RBP20.27■□□□□ 0.84
ABCD3-204ENST00000468860 SUCLA2Q9P2R7 463 aaPredicted RBP20.27■□□□□ 0.84
ABCD3-204ENST00000468860 ATG2AQ2TAZ0 1938 aa20.27■□□□□ 0.84
ABCD3-204ENST00000468860 IBSPP21815 317 aaPredicted RBP20.26■□□□□ 0.83
ABCD3-204ENST00000468860 RFC5P40937 340 aa20.26■□□□□ 0.83
ABCD3-204ENST00000468860 FAM189BP81408 668 aa20.26■□□□□ 0.83
ABCD3-204ENST00000468860 ORC2Q13416 577 aaPredicted RBP20.26■□□□□ 0.83
ABCD3-204ENST00000468860 GNL2Q13823 731 aaKnown RBP20.26■□□□□ 0.83
ABCD3-204ENST00000468860 PTPROQ16827 1216 aa20.26■□□□□ 0.83
ABCD3-204ENST00000468860 TJAP1Q5JTD0 557 aa20.26■□□□□ 0.83
ABCD3-204ENST00000468860 ZNF410Q86VK4 478 aa20.26■□□□□ 0.83
ABCD3-204ENST00000468860 RHPN2Q8IUC4 686 aa20.26■□□□□ 0.83
ABCD3-204ENST00000468860 NOSTRINQ8IVI9 506 aa20.26■□□□□ 0.83
ABCD3-204ENST00000468860 TPH2Q8IWU9 490 aa20.26■□□□□ 0.83
ABCD3-204ENST00000468860 MRPL38Q96DV4 380 aaKnown RBP20.26■□□□□ 0.83
ABCD3-204ENST00000468860 TMX3Q96JJ7 454 aa20.26■□□□□ 0.83
ABCD3-204ENST00000468860 HSD17B14Q9BPX1 270 aa20.26■□□□□ 0.83
ABCD3-204ENST00000468860 GCOM2Q9BZD3 368 aaPredicted RBP20.26■□□□□ 0.83
ABCD3-204ENST00000468860 MRPL42Q9Y6G3 142 aaKnown RBP20.26■□□□□ 0.83
ABCD3-204ENST00000468860 A0A087WZ62 844 aa20.25■□□□□ 0.83
ABCD3-204ENST00000468860 LYPLA2O95372 231 aa20.25■□□□□ 0.83
ABCD3-204ENST00000468860 CD2BP2O95400 341 aaKnown RBP20.25■□□□□ 0.83
ABCD3-204ENST00000468860 ZSCAN20P17040 1043 aaPredicted RBP20.25■□□□□ 0.83
ABCD3-204ENST00000468860 GATMP50440 423 aa20.25■□□□□ 0.83
ABCD3-204ENST00000468860 POLGP54098 1239 aaPredicted RBP20.25■□□□□ 0.83
ABCD3-204ENST00000468860 PAN2Q504Q3 1202 aaKnown RBP20.25■□□□□ 0.83
ABCD3-204ENST00000468860 FDXACB1Q9BRP7 624 aaPredicted RBP20.25■□□□□ 0.83
ABCD3-204ENST00000468860 C11orf84Q9BUA3 381 aaPredicted RBP20.25■□□□□ 0.83
ABCD3-204ENST00000468860 ELAC1Q9H777 363 aaKnown RBP20.25■□□□□ 0.83
ABCD3-204ENST00000468860 TMEM161AQ9NX61 479 aa20.25■□□□□ 0.83
ABCD3-204ENST00000468860 KIF3AQ9Y496 699 aa20.25■□□□□ 0.83
ABCD3-204ENST00000468860 REV3LO60673 3130 aa20.24■□□□□ 0.83
ABCD3-204ENST00000468860 ZBTB39O15060 712 aa20.24■□□□□ 0.83
ABCD3-204ENST00000468860 GAS2O43903 313 aaKnown RBP20.24■□□□□ 0.83
ABCD3-204ENST00000468860 FGFR4P22455 802 aa20.24■□□□□ 0.83
ABCD3-204ENST00000468860 TRAPPC10P48553 1259 aa20.24■□□□□ 0.83
ABCD3-204ENST00000468860 MCM2P49736 904 aa20.24■□□□□ 0.83
ABCD3-204ENST00000468860 MRPS5P82675 430 aaKnown RBP20.24■□□□□ 0.83
ABCD3-204ENST00000468860 ZNF174Q15697 407 aa20.24■□□□□ 0.83
ABCD3-204ENST00000468860 XKR9Q5GH70 373 aa20.24■□□□□ 0.83
ABCD3-204ENST00000468860 TTC38Q5R3I4 469 aa20.24■□□□□ 0.83
ABCD3-204ENST00000468860 ASB2Q96Q27 587 aa20.24■□□□□ 0.83
ABCD3-204ENST00000468860 PLVAPQ9BX97 442 aa20.24■□□□□ 0.83
ABCD3-204ENST00000468860 NOL7Q9UMY1 257 aaKnown RBP20.24■□□□□ 0.83
ABCD3-204ENST00000468860 COG5Q9UP83 839 aa20.24■□□□□ 0.83
ABCD3-204ENST00000468860 A0A0C4DFX4 3053 aa20.23■□□□□ 0.83
ABCD3-204ENST00000468860 POTEMA6NI47 508 aa20.23■□□□□ 0.83
ABCD3-204ENST00000468860 CSDE1O75534 798 aaKnown RBP20.23■□□□□ 0.83
ABCD3-204ENST00000468860 OR52Z1P0C646 297 aa20.23■□□□□ 0.83
ABCD3-204ENST00000468860 U2AF2P26368 475 aaKnown RBP eCLIP20.23■□□□□ 0.836e-7■■□□□ 13.5
ABCD3-204ENST00000468860 EMC2Q15006 297 aa20.23■□□□□ 0.83
ABCD3-204ENST00000468860 FAM102BQ5T8I3 360 aa20.23■□□□□ 0.83
ABCD3-204ENST00000468860 KSR1Q8IVT5 923 aa20.23■□□□□ 0.83
ABCD3-204ENST00000468860 PSPC1Q8WXF1 523 aaKnown RBP20.23■□□□□ 0.83
ABCD3-204ENST00000468860 SYMPKQ92797 1274 aaKnown RBP20.23■□□□□ 0.83
ABCD3-204ENST00000468860 NLRP4Q96MN2 994 aa20.23■□□□□ 0.83
ABCD3-204ENST00000468860 INO80BQ9C086 356 aaPredicted RBP20.23■□□□□ 0.83
ABCD3-204ENST00000468860 ATP6V0A4Q9HBG4 840 aa20.23■□□□□ 0.83
ABCD3-204ENST00000468860 COL4A3BPQ9Y5P4 624 aa20.23■□□□□ 0.83
ABCD3-204ENST00000468860 SPTBN5Q9NRC6 3674 aaKnown RBP20.22■□□□□ 0.83
ABCD3-204ENST00000468860 SFPQP23246 707 aaKnown RBP eCLIP20.22■□□□□ 0.832e-13■■■□□ 14.7
ABCD3-204ENST00000468860 TIGD5Q53EQ6 642 aa20.22■□□□□ 0.83
ABCD3-204ENST00000468860 TCP11Q8WWU5 503 aa20.22■□□□□ 0.83
ABCD3-204ENST00000468860 P2RX5Q93086 422 aa20.22■□□□□ 0.83
ABCD3-204ENST00000468860 TMEM143Q96AN5 459 aa20.22■□□□□ 0.83
ABCD3-204ENST00000468860 LMAN2LQ9H0V9 348 aa20.22■□□□□ 0.83
ABCD3-204ENST00000468860 CHST12Q9NRB3 414 aa20.22■□□□□ 0.83
ABCD3-204ENST00000468860 BMP2KQ9NSY1 1161 aaPredicted RBP20.22■□□□□ 0.83
ABCD3-204ENST00000468860 ANKEF1Q9NU02 776 aa20.22■□□□□ 0.83
ABCD3-204ENST00000468860 TBKBP1A7MCY6 615 aa20.21■□□□□ 0.83
ABCD3-204ENST00000468860 TECP42680 631 aa20.21■□□□□ 0.83
ABCD3-204ENST00000468860 TFF2Q03403 129 aa20.21■□□□□ 0.83
ABCD3-204ENST00000468860 AAK1Q2M2I8 961 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms