RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 ZNF668Q96K58 619 aaPredicted RBP19.16■□□□□ 0.66
SSBP1-207ENST00000468267 MTMR9Q96QG7 549 aa19.16■□□□□ 0.66
SSBP1-207ENST00000468267 LXNQ9BS40 222 aa19.16■□□□□ 0.66
SSBP1-207ENST00000468267 FOXP1Q9H334 677 aaPredicted RBP19.16■□□□□ 0.66
SSBP1-207ENST00000468267 UPF2Q9HAU5 1272 aaKnown RBP19.16■□□□□ 0.66
SSBP1-207ENST00000468267 CYP26B1Q9NR63 512 aa19.16■□□□□ 0.66
SSBP1-207ENST00000468267 RGL1Q9NZL6 768 aa19.16■□□□□ 0.66
SSBP1-207ENST00000468267 LRFN2Q9ULH4 789 aa19.16■□□□□ 0.66
SSBP1-207ENST00000468267 PCDHB7Q9Y5E2 793 aa19.16■□□□□ 0.66
SSBP1-207ENST00000468267 FNDC1Q4ZHG4 1894 aaPredicted RBP19.16■□□□□ 0.66
SSBP1-207ENST00000468267 C9IYK1 514 aa19.15■□□□□ 0.66
SSBP1-207ENST00000468267 ST18O60284 1047 aa19.15■□□□□ 0.66
SSBP1-207ENST00000468267 RB1P06400 928 aa19.15■□□□□ 0.66
SSBP1-207ENST00000468267 DARSP14868 501 aaKnown RBP19.15■□□□□ 0.66
SSBP1-207ENST00000468267 BMPR1AP36894 532 aa19.15■□□□□ 0.66
SSBP1-207ENST00000468267 NPEPPSP55786 919 aa19.15■□□□□ 0.66
SSBP1-207ENST00000468267 FAM189BP81408 668 aa19.15■□□□□ 0.66
SSBP1-207ENST00000468267 GPM6BQ13491 265 aa19.15■□□□□ 0.66
SSBP1-207ENST00000468267 SKIV2LQ15477 1246 aaKnown RBP19.15■□□□□ 0.66
SSBP1-207ENST00000468267 TJAP1Q5JTD0 557 aa19.15■□□□□ 0.66
SSBP1-207ENST00000468267 CMTR2Q8IYT2 770 aaKnown RBP19.15■□□□□ 0.66
SSBP1-207ENST00000468267 ZNF579Q8NAF0 562 aaKnown RBP19.15■□□□□ 0.66
SSBP1-207ENST00000468267 DYDC2Q96IM9 177 aa19.15■□□□□ 0.66
SSBP1-207ENST00000468267 JPH2Q9BR39 696 aaPredicted RBP19.15■□□□□ 0.66
SSBP1-207ENST00000468267 ZSWIM4Q9H7M6 989 aa19.15■□□□□ 0.66
SSBP1-207ENST00000468267 TTC12Q9H892 705 aaPredicted RBP19.15■□□□□ 0.66
SSBP1-207ENST00000468267 SUCLA2Q9P2R7 463 aaPredicted RBP19.15■□□□□ 0.66
SSBP1-207ENST00000468267 RWDD3Q9Y3V2 267 aa19.15■□□□□ 0.66
SSBP1-207ENST00000468267 PPME1Q9Y570 386 aa19.15■□□□□ 0.66
SSBP1-207ENST00000468267 C5orf67F2Z3F1 127 aa19.14■□□□□ 0.65
SSBP1-207ENST00000468267 SLITRK3O94933 977 aa19.14■□□□□ 0.65
SSBP1-207ENST00000468267 CTNNB1P35222 781 aa19.14■□□□□ 0.65
SSBP1-207ENST00000468267 TXKP42681 527 aa19.14■□□□□ 0.65
SSBP1-207ENST00000468267 MRPS5P82675 430 aaKnown RBP19.14■□□□□ 0.65
SSBP1-207ENST00000468267 CTTNQ14247 550 aaKnown RBP19.14■□□□□ 0.65
SSBP1-207ENST00000468267 EXOC8Q8IYI6 725 aa19.14■□□□□ 0.65
SSBP1-207ENST00000468267 NLRP7Q8WX94 980 aa19.14■□□□□ 0.65
SSBP1-207ENST00000468267 MRPL38Q96DV4 380 aaKnown RBP19.14■□□□□ 0.65
SSBP1-207ENST00000468267 CEP170P1Q96L14 293 aa19.14■□□□□ 0.65
SSBP1-207ENST00000468267 SCLT1Q96NL6 688 aa19.14■□□□□ 0.65
SSBP1-207ENST00000468267 ASB2Q96Q27 587 aa19.14■□□□□ 0.65
SSBP1-207ENST00000468267 EIF2AK1Q9BQI3 630 aaKnown RBP19.14■□□□□ 0.65
SSBP1-207ENST00000468267 ATP2B1P20020 1258 aa19.13■□□□□ 0.65
SSBP1-207ENST00000468267 YWHABP31946 246 aaKnown RBP19.13■□□□□ 0.65
SSBP1-207ENST00000468267 CYP4A11Q02928 519 aa19.13■□□□□ 0.65
SSBP1-207ENST00000468267 PTPROQ16827 1216 aa19.13■□□□□ 0.65
SSBP1-207ENST00000468267 POTEHQ6S545 545 aa19.13■□□□□ 0.65
SSBP1-207ENST00000468267 OTUD6AQ7L8S5 288 aa19.13■□□□□ 0.65
SSBP1-207ENST00000468267 TPH2Q8IWU9 490 aa19.13■□□□□ 0.65
SSBP1-207ENST00000468267 SYMPKQ92797 1274 aaKnown RBP19.13■□□□□ 0.65
SSBP1-207ENST00000468267 HSD17B14Q9BPX1 270 aa19.13■□□□□ 0.65
SSBP1-207ENST00000468267 GCOM2Q9BZD3 368 aaPredicted RBP19.13■□□□□ 0.65
SSBP1-207ENST00000468267 TMEM60Q9H2L4 133 aa19.13■□□□□ 0.65
SSBP1-207ENST00000468267 DHX33Q9H6R0 707 aaKnown RBP19.13■□□□□ 0.65
SSBP1-207ENST00000468267 MRPL42Q9Y6G3 142 aaKnown RBP19.13■□□□□ 0.65
SSBP1-207ENST00000468267 ARID2Q68CP9 1835 aa19.13■□□□□ 0.65
SSBP1-207ENST00000468267 KIAA1671Q9BY89 1806 aa19.13■□□□□ 0.65
SSBP1-207ENST00000468267 ZBTB39O15060 712 aa19.12■□□□□ 0.65
SSBP1-207ENST00000468267 ABCB7O75027 752 aa19.12■□□□□ 0.65
SSBP1-207ENST00000468267 ZSCAN20P17040 1043 aaPredicted RBP19.12■□□□□ 0.65
SSBP1-207ENST00000468267 IBSPP21815 317 aaPredicted RBP19.12■□□□□ 0.65
SSBP1-207ENST00000468267 MCM7P33993 719 aa19.12■□□□□ 0.65
SSBP1-207ENST00000468267 RFC5P40937 340 aa19.12■□□□□ 0.65
SSBP1-207ENST00000468267 GATMP50440 423 aa19.12■□□□□ 0.65
SSBP1-207ENST00000468267 PAN2Q504Q3 1202 aaKnown RBP19.12■□□□□ 0.65
SSBP1-207ENST00000468267 ZNF410Q86VK4 478 aa19.12■□□□□ 0.65
SSBP1-207ENST00000468267 RHPN2Q8IUC4 686 aa19.12■□□□□ 0.65
SSBP1-207ENST00000468267 NOSTRINQ8IVI9 506 aa19.12■□□□□ 0.65
SSBP1-207ENST00000468267 SLC7A3Q8WY07 619 aa19.12■□□□□ 0.65
SSBP1-207ENST00000468267 C11orf84Q9BUA3 381 aaPredicted RBP19.12■□□□□ 0.65
SSBP1-207ENST00000468267 PLVAPQ9BX97 442 aa19.12■□□□□ 0.65
SSBP1-207ENST00000468267 ELAC1Q9H777 363 aaKnown RBP19.12■□□□□ 0.65
SSBP1-207ENST00000468267 TMEM161AQ9NX61 479 aa19.12■□□□□ 0.65
SSBP1-207ENST00000468267 COG5Q9UP83 839 aa19.12■□□□□ 0.65
SSBP1-207ENST00000468267 A0A087WZ62 844 aa19.11■□□□□ 0.65
SSBP1-207ENST00000468267 CSDE1O75534 798 aaKnown RBP19.11■□□□□ 0.65
SSBP1-207ENST00000468267 LYPLA2O95372 231 aa19.11■□□□□ 0.65
SSBP1-207ENST00000468267 FGFR4P22455 802 aa19.11■□□□□ 0.65
SSBP1-207ENST00000468267 POLGP54098 1239 aaPredicted RBP19.11■□□□□ 0.65
SSBP1-207ENST00000468267 TFF2Q03403 129 aa19.11■□□□□ 0.65
SSBP1-207ENST00000468267 ORC2Q13416 577 aaPredicted RBP19.11■□□□□ 0.65
SSBP1-207ENST00000468267 XKR9Q5GH70 373 aa19.11■□□□□ 0.65
SSBP1-207ENST00000468267 FAM102BQ5T8I3 360 aa19.11■□□□□ 0.65
SSBP1-207ENST00000468267 KSR1Q8IVT5 923 aa19.11■□□□□ 0.65
SSBP1-207ENST00000468267 NEK9Q8TD19 979 aa19.11■□□□□ 0.65
SSBP1-207ENST00000468267 HLA-CQ95604 372 aa19.11■□□□□ 0.65
SSBP1-207ENST00000468267 TMX3Q96JJ7 454 aa19.11■□□□□ 0.65
SSBP1-207ENST00000468267 TBC1D32Q96NH3 1257 aa19.11■□□□□ 0.65
SSBP1-207ENST00000468267 FDXACB1Q9BRP7 624 aaPredicted RBP19.11■□□□□ 0.65
SSBP1-207ENST00000468267 ATP6V0A4Q9HBG4 840 aa19.11■□□□□ 0.65
SSBP1-207ENST00000468267 TCF20Q9UGU0 1960 aaKnown RBP19.11■□□□□ 0.65
SSBP1-207ENST00000468267 ATG2AQ2TAZ0 1938 aa19.1■□□□□ 0.65
SSBP1-207ENST00000468267 CD2BP2O95400 341 aaKnown RBP19.1■□□□□ 0.65
SSBP1-207ENST00000468267 U2AF2P26368 475 aaKnown RBP eCLIP19.1■□□□□ 0.65
SSBP1-207ENST00000468267 GNL2Q13823 731 aaKnown RBP19.1■□□□□ 0.65
SSBP1-207ENST00000468267 ZNF174Q15697 407 aa19.1■□□□□ 0.65
SSBP1-207ENST00000468267 AAK1Q2M2I8 961 aa19.1■□□□□ 0.65
SSBP1-207ENST00000468267 PRPF31Q8WWY3 499 aaKnown RBP19.1■□□□□ 0.65
SSBP1-207ENST00000468267 INO80BQ9C086 356 aaPredicted RBP19.1■□□□□ 0.65
SSBP1-207ENST00000468267 TBKBP1A7MCY6 615 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms