RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 C1QTNF3-AMACRE9PGA6 284 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 F8W031 263 aaPredicted RBP5.42□□□□□ -1.54
SSR3-204ENST00000467733 UBE2Q2LH0YL09 131 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 U2SURPO15042 1029 aaKnown RBP5.42□□□□□ -1.54
SSR3-204ENST00000467733 MATN3O15232 486 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 FGF10O15520 208 aaPredicted RBP5.42□□□□□ -1.54
SSR3-204ENST00000467733 SUV39H1O43463 412 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 VIL1P09327 827 aaKnown RBP5.42□□□□□ -1.54
SSR3-204ENST00000467733 IMPDH2P12268 514 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 NOP2P46087 812 aaKnown RBP5.42□□□□□ -1.54
SSR3-204ENST00000467733 CRKP46108 304 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 PRR5P85299 388 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 HDLBPQ00341 1268 aaKnown RBP5.42□□□□□ -1.54
SSR3-204ENST00000467733 DLX2Q07687 328 aaPredicted RBP5.42□□□□□ -1.54
SSR3-204ENST00000467733 CPZQ66K79 652 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 GK5Q6ZS86 529 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 MOB2Q70IA6 237 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 DDX46Q7L014 1031 aaKnown RBP5.42□□□□□ -1.54
SSR3-204ENST00000467733 METTL16Q86W50 562 aaKnown RBP5.42□□□□□ -1.54
SSR3-204ENST00000467733 SLITRK4Q8IW52 837 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 NGEFQ8N5V2 710 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 ALG3Q92685 438 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 ERO1AQ96HE7 468 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 ZNF333Q96JL9 665 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 UTP14AQ9BVJ6 771 aaKnown RBP5.42□□□□□ -1.54
SSR3-204ENST00000467733 CCSER2Q9H7U1 834 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 SUCOQ9UBS9 1254 aaKnown RBP5.42□□□□□ -1.54
SSR3-204ENST00000467733 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.42□□□□□ -1.54
SSR3-204ENST00000467733 HCFC2Q9Y5Z7 792 aa5.42□□□□□ -1.54
SSR3-204ENST00000467733 SPTBN5Q9NRC6 3674 aaKnown RBP5.42□□□□□ -1.54
SSR3-204ENST00000467733 SPEF2Q9C093 1822 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 ALPK3Q96L96 1907 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 COL1A1P02452 1464 aaPredicted RBP5.41□□□□□ -1.54
SSR3-204ENST00000467733 ASGR2P07307 311 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 PRKAR2BP31323 418 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 RBM10P98175 930 aaKnown RBP5.41□□□□□ -1.54
SSR3-204ENST00000467733 CLCQ05315 142 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 TCIRG1Q13488 830 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 MCM10Q7L590 875 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 CABP7Q86V35 215 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 CCDC144CPQ8IYA2 1237 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 AGBL3Q8NEM8 1001 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 RTF1Q92541 710 aaKnown RBP5.41□□□□□ -1.54
SSR3-204ENST00000467733 TSPAN17Q96FV3 270 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 PHACTR3Q96KR7 559 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 FERD3LQ96RJ6 166 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 EYA3Q99504 573 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 PRO3102Q9H379 93 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 NTMQ9P121 344 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 POLLQ9UGP5 575 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 DUSP10Q9Y6W6 482 aa5.41□□□□□ -1.54
SSR3-204ENST00000467733 MANSC4A6NHS7 340 aaPredicted RBP5.4□□□□□ -1.54
SSR3-204ENST00000467733 E9PSI1 815 aa5.4□□□□□ -1.54
SSR3-204ENST00000467733 SHOXO15266 292 aa5.4□□□□□ -1.54
SSR3-204ENST00000467733 HTATSF1O43719 755 aaKnown RBP5.4□□□□□ -1.54
SSR3-204ENST00000467733 MYL6BP14649 208 aa5.4□□□□□ -1.54
SSR3-204ENST00000467733 TCF3P15923 654 aa5.4□□□□□ -1.54
SSR3-204ENST00000467733 L1CAMP32004 1257 aa5.4□□□□□ -1.54
SSR3-204ENST00000467733 NF2P35240 595 aa5.4□□□□□ -1.54
SSR3-204ENST00000467733 RACK1P63244 317 aaKnown RBP5.4□□□□□ -1.54
SSR3-204ENST00000467733 COL9A2Q14055 689 aaPredicted RBP5.4□□□□□ -1.54
SSR3-204ENST00000467733 SLC9C1Q4G0N8 1177 aa5.4□□□□□ -1.54
SSR3-204ENST00000467733 CD99L2Q8TCZ2 262 aa5.4□□□□□ -1.54
SSR3-204ENST00000467733 DDX1Q92499 740 aaKnown RBP5.4□□□□□ -1.54
SSR3-204ENST00000467733 SAMD11Q96NU1 681 aa5.4□□□□□ -1.54
SSR3-204ENST00000467733 RBM15Q96T37 977 aaKnown RBP eCLIP5.4□□□□□ -1.54
SSR3-204ENST00000467733 GMLQ99445 158 aa5.4□□□□□ -1.54
SSR3-204ENST00000467733 C1QTNF3Q9BXJ4 246 aa5.4□□□□□ -1.54
SSR3-204ENST00000467733 TGIF2Q9GZN2 237 aa5.4□□□□□ -1.54
SSR3-204ENST00000467733 MYOZ2Q9NPC6 264 aa5.4□□□□□ -1.54
SSR3-204ENST00000467733 PLA2G2DQ9UNK4 145 aa5.4□□□□□ -1.54
SSR3-204ENST00000467733 RRP7AQ9Y3A4 280 aaKnown RBP5.4□□□□□ -1.54
SSR3-204ENST00000467733 MYH3P11055 1940 aa5.4□□□□□ -1.55
SSR3-204ENST00000467733 MUC3AQ02505 3323 aa5.4□□□□□ -1.55
SSR3-204ENST00000467733 NCOR1O75376 2440 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 SSC5DA1L4H1 1573 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 A0A1W2PPC1 479 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 H0Y8X5 98 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 ZBTB48P10074 688 aaPredicted RBP5.39□□□□□ -1.55
SSR3-204ENST00000467733 TACR1P25103 407 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 MC3RP41968 323 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 SARSP49591 514 aaKnown RBP5.39□□□□□ -1.55
SSR3-204ENST00000467733 INHBEP58166 350 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 GPSM2P81274 684 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 PAK2Q13177 524 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 CRHR2Q13324 411 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 SLC9A5Q14940 896 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 TAF7Q15545 349 aaPredicted RBP5.39□□□□□ -1.55
SSR3-204ENST00000467733 SLC4A8Q2Y0W8 1093 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 ANKRD39Q53RE8 183 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 NOL9Q5SY16 702 aaKnown RBP5.39□□□□□ -1.55
SSR3-204ENST00000467733 PRAMEF18Q5VWM3 479 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 ARMC9Q7Z3E5 817 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 LRP10Q7Z4F1 713 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 NLRP10Q86W26 655 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 TBC1D16Q8TBP0 767 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 CPA5Q8WXQ8 436 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 GPRASP2Q96D09 838 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 PTCHD1Q96NR3 888 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 SLC9A7Q96T83 725 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms