RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 SLC30A4O14863 429 aa11.74□□□□□ -0.53
HDAC3-203ENST00000467533 ZC3H11AO75152 810 aaKnown RBP eCLIP11.74□□□□□ -0.53
HDAC3-203ENST00000467533 NT5C2P49902 561 aa11.74□□□□□ -0.53
HDAC3-203ENST00000467533 DSC3Q14574 896 aa11.74□□□□□ -0.53
HDAC3-203ENST00000467533 KIZQ2M2Z5 673 aa11.74□□□□□ -0.53
HDAC3-203ENST00000467533 MCMDC2Q4G0Z9 681 aa11.74□□□□□ -0.53
HDAC3-203ENST00000467533 IFIT1BQ5T764 474 aaKnown RBP11.74□□□□□ -0.53
HDAC3-203ENST00000467533 ZNF589Q86UQ0 364 aaPredicted RBP11.74□□□□□ -0.53
HDAC3-203ENST00000467533 HELQQ8TDG4 1101 aa11.74□□□□□ -0.53
HDAC3-203ENST00000467533 OTUD7AQ8TE49 926 aaPredicted RBP11.74□□□□□ -0.53
HDAC3-203ENST00000467533 CUL5Q93034 780 aa11.74□□□□□ -0.53
HDAC3-203ENST00000467533 NXPE3Q969Y0 559 aa11.74□□□□□ -0.53
HDAC3-203ENST00000467533 PCYT2Q99447 389 aa11.74□□□□□ -0.53
HDAC3-203ENST00000467533 UBAC1Q9BSL1 405 aa11.74□□□□□ -0.53
HDAC3-203ENST00000467533 MRPL9Q9BYD2 267 aaKnown RBP11.74□□□□□ -0.53
HDAC3-203ENST00000467533 ZSCAN32Q9NX65 697 aa11.74□□□□□ -0.53
HDAC3-203ENST00000467533 MAD2L2Q9UI95 211 aa11.74□□□□□ -0.53
HDAC3-203ENST00000467533 IRAK3Q9Y616 596 aa11.74□□□□□ -0.53
HDAC3-203ENST00000467533 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.74□□□□□ -0.53
HDAC3-203ENST00000467533 CLUHO75153 1309 aa11.74□□□□□ -0.53
HDAC3-203ENST00000467533 EVPLQ92817 2033 aa11.74□□□□□ -0.53
HDAC3-203ENST00000467533 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-203ENST00000467533 ZNF213O14771 459 aa11.73□□□□□ -0.53
HDAC3-203ENST00000467533 TBC1D4O60343 1298 aa11.73□□□□□ -0.53
HDAC3-203ENST00000467533 MX1P20591 662 aa11.73□□□□□ -0.53
HDAC3-203ENST00000467533 TGM1P22735 817 aa11.73□□□□□ -0.53
HDAC3-203ENST00000467533 KLRC1P26715 233 aa11.73□□□□□ -0.53
HDAC3-203ENST00000467533 KLRC2P26717 231 aa11.73□□□□□ -0.53
HDAC3-203ENST00000467533 POLGP54098 1239 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-203ENST00000467533 SPEM2Q0P670 501 aa11.73□□□□□ -0.53
HDAC3-203ENST00000467533 MTMR1Q13613 665 aa11.73□□□□□ -0.53
HDAC3-203ENST00000467533 CLLU1OSQ5K130 101 aa11.73□□□□□ -0.53
HDAC3-203ENST00000467533 ANKRD11Q6UB99 2663 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-203ENST00000467533 TMEM173Q86WV6 379 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-203ENST00000467533 ECHDC2Q86YB7 292 aa11.73□□□□□ -0.53
HDAC3-203ENST00000467533 ZBTB44Q8NCP5 570 aa11.73□□□□□ -0.53
HDAC3-203ENST00000467533 SHDQ96IW2 340 aa11.73□□□□□ -0.53
HDAC3-203ENST00000467533 MYADMQ96S97 322 aa11.73□□□□□ -0.53
HDAC3-203ENST00000467533 EMILIN2Q9BXX0 1053 aa11.73□□□□□ -0.53
HDAC3-203ENST00000467533 JPH1Q9HDC5 661 aaPredicted RBP11.73□□□□□ -0.53
HDAC3-203ENST00000467533 EPS15L1Q9UBC2 864 aa11.73□□□□□ -0.53
HDAC3-203ENST00000467533 RAB23Q9ULC3 237 aa11.73□□□□□ -0.53
HDAC3-203ENST00000467533 ZSCAN20P17040 1043 aaPredicted RBP11.72□□□□□ -0.53
HDAC3-203ENST00000467533 CLCN4P51793 760 aa11.72□□□□□ -0.53
HDAC3-203ENST00000467533 CRYBB1P53674 252 aaPredicted RBP11.72□□□□□ -0.53
HDAC3-203ENST00000467533 UBXN2BQ14CS0 331 aa11.72□□□□□ -0.53
HDAC3-203ENST00000467533 USP17L6PQ6QN14 398 aa11.72□□□□□ -0.53
HDAC3-203ENST00000467533 DDX53Q86TM3 631 aaKnown RBP11.72□□□□□ -0.53
HDAC3-203ENST00000467533 PIBF1Q8WXW3 757 aa11.72□□□□□ -0.53
HDAC3-203ENST00000467533 EVI5LQ96CN4 794 aa11.72□□□□□ -0.53
HDAC3-203ENST00000467533 DCTPP1Q9H773 170 aa11.72□□□□□ -0.53
HDAC3-203ENST00000467533 WDR6Q9NNW5 1121 aaKnown RBP11.72□□□□□ -0.53
HDAC3-203ENST00000467533 MAN1C1Q9NR34 630 aa11.72□□□□□ -0.53
HDAC3-203ENST00000467533 SLC2A4RGQ9NR83 387 aa11.72□□□□□ -0.53
HDAC3-203ENST00000467533 SLC9A2Q9UBY0 812 aa11.72□□□□□ -0.53
HDAC3-203ENST00000467533 BAZ2BQ9UIF8 2168 aaKnown RBP11.72□□□□□ -0.53
HDAC3-203ENST00000467533 DOCK8Q8NF50 2099 aa11.72□□□□□ -0.53
HDAC3-203ENST00000467533 PNMA6FA0A0J9YX94 578 aa11.71□□□□□ -0.53
HDAC3-203ENST00000467533 KANSL1LA0AUZ9 987 aa11.71□□□□□ -0.53
HDAC3-203ENST00000467533 PALM3A6NDB9 673 aaPredicted RBP11.71□□□□□ -0.53
HDAC3-203ENST00000467533 LILRB5O75023 590 aa11.71□□□□□ -0.53
HDAC3-203ENST00000467533 SSBP05455 408 aaKnown RBP eCLIP11.71□□□□□ -0.53
HDAC3-203ENST00000467533 ITGB5P18084 799 aa11.71□□□□□ -0.53
HDAC3-203ENST00000467533 PMLP29590 882 aa11.71□□□□□ -0.53
HDAC3-203ENST00000467533 STAT5BP51692 787 aa11.71□□□□□ -0.53
HDAC3-203ENST00000467533 STARD6P59095 220 aa11.71□□□□□ -0.53
HDAC3-203ENST00000467533 NMIQ13287 307 aaPredicted RBP11.71□□□□□ -0.53
HDAC3-203ENST00000467533 LPAL2Q16609 132 aa11.71□□□□□ -0.53
HDAC3-203ENST00000467533 SLC35G1Q2M3R5 365 aa11.71□□□□□ -0.53
HDAC3-203ENST00000467533 GET4Q7L5D6 327 aaPredicted RBP11.71□□□□□ -0.53
HDAC3-203ENST00000467533 KIAA0319LQ8IZA0 1049 aa11.71□□□□□ -0.53
HDAC3-203ENST00000467533 KLHL5Q96PQ7 755 aa11.71□□□□□ -0.53
HDAC3-203ENST00000467533 RIOX1Q9H6W3 641 aa11.71□□□□□ -0.53
HDAC3-203ENST00000467533 ZSWIM5Q9P217 1185 aa11.71□□□□□ -0.53
HDAC3-203ENST00000467533 NUMBLQ9Y6R0 609 aa11.71□□□□□ -0.53
HDAC3-203ENST00000467533 COL1A2P08123 1366 aa11.7□□□□□ -0.54
HDAC3-203ENST00000467533 CCDC195A0A1B0GUA6 201 aa11.7□□□□□ -0.54
HDAC3-203ENST00000467533 INPPL1O15357 1258 aa11.7□□□□□ -0.54
HDAC3-203ENST00000467533 VTNP04004 478 aa11.7□□□□□ -0.54
HDAC3-203ENST00000467533 SNW1Q13573 536 aaKnown RBP11.7□□□□□ -0.54
HDAC3-203ENST00000467533 ELMSAN1Q6PJG2 1045 aa11.7□□□□□ -0.54
HDAC3-203ENST00000467533 TSSK4Q6SA08 328 aa11.7□□□□□ -0.54
HDAC3-203ENST00000467533 PLPPR4Q7Z2D5 763 aa11.7□□□□□ -0.54
HDAC3-203ENST00000467533 ST13P5Q8NFI4 369 aaPredicted RBP11.7□□□□□ -0.54
HDAC3-203ENST00000467533 CMASQ8NFW8 434 aaPredicted RBP11.7□□□□□ -0.54
HDAC3-203ENST00000467533 BCL7CQ8WUZ0 217 aaPredicted RBP11.7□□□□□ -0.54
HDAC3-203ENST00000467533 DDX1Q92499 740 aaKnown RBP11.7□□□□□ -0.54
HDAC3-203ENST00000467533 IGSF21Q96ID5 467 aa11.7□□□□□ -0.54
HDAC3-203ENST00000467533 CARNS1A5YM72 827 aa11.69□□□□□ -0.54
HDAC3-203ENST00000467533 CYTH3O43739 400 aa11.69□□□□□ -0.54
HDAC3-203ENST00000467533 HBP1O60381 514 aa11.69□□□□□ -0.54
HDAC3-203ENST00000467533 PROS1P07225 676 aa11.69□□□□□ -0.54
HDAC3-203ENST00000467533 CNPP09543 421 aaKnown RBP11.69□□□□□ -0.54
HDAC3-203ENST00000467533 MYBP10242 640 aa11.69□□□□□ -0.54
HDAC3-203ENST00000467533 MAGEA9P43362 315 aa11.69□□□□□ -0.54
HDAC3-203ENST00000467533 ACTR2P61160 394 aa11.69□□□□□ -0.54
HDAC3-203ENST00000467533 HTR4Q13639 388 aa11.69□□□□□ -0.54
HDAC3-203ENST00000467533 GRM4Q14833 912 aa11.69□□□□□ -0.54
HDAC3-203ENST00000467533 WTAPQ15007 396 aa11.69□□□□□ -0.54
HDAC3-203ENST00000467533 MLF2Q15773 248 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms