RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	DIS3	Q9Y2L1	958 aa	Known RBP	13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	EMSY	Q7Z589	1322 aa		13.52	□□□□□ -0.25
HDLBP-231	ENST00000467435	CCDC169	A6NNP5	214 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	SLC16A4	O15374	487 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	LGR5	O75473	907 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	KCNJ6	P48051	423 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	KLK7	P49862	253 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	SOX10	P56693	466 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	RTP1	P59025	263 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	GTF2B	Q00403	316 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	MAMDC4	Q6UXC1	1216 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	HAUS6	Q7Z4H7	955 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	FRMD5	Q7Z6J6	570 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	SMC1B	Q8NDV3	1235 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	BSND	Q8WZ55	320 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	MAML3	Q96JK9	1138 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	SPATA33	Q96N06	139 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	NUP58	Q9BVL2	599 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	NIFK	Q9BYG3	293 aa	Known RBP	13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	IKZF4	Q9H2S9	585 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	C17orf75	Q9HAS0	396 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	PDLIM7	Q9NR12	457 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	AGPAT3	Q9NRZ7	376 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	NRBP2	Q9NSY0	501 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	FAM184B	Q9ULE4	1060 aa		13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	ABT1	Q9ULW3	272 aa	Known RBP	13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
HDLBP-231	ENST00000467435	RBM47	A0AV96	593 aa	Known RBP	13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	FAM155A	B1AL88	458 aa	Predicted RBP	13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	KIF3C	O14782	793 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	ARHGAP6	O43182	974 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	TRIM21	P19474	475 aa	Known RBP	13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	RFC5	P40937	340 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	NPTX2	P47972	431 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	SMTN	P53814	917 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	ARHGAP1	Q07960	439 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	SREBF2	Q12772	1141 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	HSDL1	Q3SXM5	330 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	TAPT1	Q6NXT6	567 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	TRIM50	Q86XT4	487 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	RETREG2	Q8NC44	543 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	SPIRE2	Q8WWL2	714 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	GLG1	Q92896	1179 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	KIFC3	Q9BVG8	833 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	KATNBL1	Q9H079	304 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	METTL14	Q9HCE5	456 aa	Known RBP	13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	KMT5A	Q9NQR1	393 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	ABHD10	Q9NUJ1	306 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	SLC5A4	Q9NY91	659 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	SIK3	Q9Y2K2	1263 aa		13.5	□□□□□ -0.25
HDLBP-231	ENST00000467435	TTC26	A0AVF1	554 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	STX10	O60499	249 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	AKAP3	O75969	853 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	SNAI1	O95863	264 aa	Predicted RBP	13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	GH1	P01241	217 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	MARK3	P27448	753 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	CASP4	P49662	377 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	CYP2J2	P51589	502 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	INHBE	P58166	350 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	PPP2R3A	Q06190	1150 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	MORN1	Q5T089	497 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	TMEM63B	Q5T3F8	832 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	PLPPR4	Q7Z2D5	763 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	FAM186B	Q8IYM0	893 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	TMEM161B	Q8NDZ6	487 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	NPLOC4	Q8TAT6	608 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	SLC7A3	Q8WY07	619 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	BBX	Q8WY36	941 aa	Predicted RBP	13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	CCDC102A	Q96A19	550 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	IQCD	Q96DY2	449 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	IFT74	Q96LB3	600 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	CEP89	Q96ST8	783 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	MKNK1	Q9BUB5	465 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	NAA15	Q9BXJ9	866 aa	Known RBP	13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	TTYH3	Q9C0H2	523 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	DHX33	Q9H6R0	707 aa	Known RBP	13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	ZFYVE28	Q9HCC9	887 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	CGN	Q9P2M7	1197 aa	Known RBP	13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	CAPN11	Q9UMQ6	739 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	EXOC7	Q9UPT5	735 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	PPME1	Q9Y570	386 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	DOCK3	Q8IZD9	2030 aa		13.49	□□□□□ -0.25
HDLBP-231	ENST00000467435	ADGRA3	Q8IWK6	1321 aa		13.48	□□□□□ -0.25
HDLBP-231	ENST00000467435		A0A1W2PQJ5	194 aa		13.48	□□□□□ -0.25
HDLBP-231	ENST00000467435	DENND3	A2RUS2	1198 aa		13.48	□□□□□ -0.25
HDLBP-231	ENST00000467435	USP27X	A6NNY8	438 aa		13.48	□□□□□ -0.25
HDLBP-231	ENST00000467435		H0YCG3	227 aa		13.48	□□□□□ -0.25
HDLBP-231	ENST00000467435	RNF225	M0QZC1	329 aa	Predicted RBP	13.48	□□□□□ -0.25
HDLBP-231	ENST00000467435	TLR2	O60603	784 aa		13.48	□□□□□ -0.25
HDLBP-231	ENST00000467435	ECM2	O94769	699 aa	Predicted RBP	13.48	□□□□□ -0.25
HDLBP-231	ENST00000467435	XRCC5	P13010	732 aa	Known RBP	13.48	□□□□□ -0.25
HDLBP-231	ENST00000467435	FECH	P22830	423 aa		13.48	□□□□□ -0.25
HDLBP-231	ENST00000467435	KRT9	P35527	623 aa		13.48	□□□□□ -0.25
HDLBP-231	ENST00000467435	PSMC2	P35998	433 aa	Known RBP	13.48	□□□□□ -0.25
HDLBP-231	ENST00000467435	ADCYAP1R1	P41586	468 aa		13.48	□□□□□ -0.25
HDLBP-231	ENST00000467435	MAP2K5	Q13163	448 aa		13.48	□□□□□ -0.25
HDLBP-231	ENST00000467435	LAMC2	Q13753	1193 aa		13.48	□□□□□ -0.25
HDLBP-231	ENST00000467435	MYBPC2	Q14324	1141 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms