RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 TIGD7Q6NT04 549 aaPredicted RBP5.32□□□□□ -1.56
VPS50-209ENST00000467326 USP30Q70CQ3 517 aa5.32□□□□□ -1.56
VPS50-209ENST00000467326 RNF180Q86T96 592 aa5.32□□□□□ -1.56
VPS50-209ENST00000467326 C11orf74Q86VG3 221 aa5.32□□□□□ -1.56
VPS50-209ENST00000467326 THNSL2Q86YJ6 484 aa5.32□□□□□ -1.56
VPS50-209ENST00000467326 BCL6BQ8N143 479 aaPredicted RBP5.32□□□□□ -1.56
VPS50-209ENST00000467326 GIMAP8Q8ND71 665 aaPredicted RBP5.32□□□□□ -1.56
VPS50-209ENST00000467326 OR14K1Q8NGZ2 314 aa5.32□□□□□ -1.56
VPS50-209ENST00000467326 C8orf49Q96NF6 230 aa5.32□□□□□ -1.56
VPS50-209ENST00000467326 DPYSL5Q9BPU6 564 aa5.32□□□□□ -1.56
VPS50-209ENST00000467326 KCMF1Q9P0J7 381 aa5.32□□□□□ -1.56
VPS50-209ENST00000467326 SAE1Q9UBE0 346 aaPredicted RBP5.32□□□□□ -1.56
VPS50-209ENST00000467326 VWA7Q9Y334 891 aa5.32□□□□□ -1.56
VPS50-209ENST00000467326 TGM5O43548 720 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 CDC14BO60729 498 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 FKBP9O95302 570 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 STAT3P40763 770 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 SMAD3P84022 425 aaKnown RBP5.31□□□□□ -1.56
VPS50-209ENST00000467326 LRRC32Q14392 662 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 ICAM4Q14773 271 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 NOLC1Q14978 699 aaKnown RBP eCLIP5.31□□□□□ -1.56
VPS50-209ENST00000467326 TBR1Q16650 682 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 FKBP9P1Q75LS8 142 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 BMP8AQ7Z5Y6 402 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 CHST13Q8NET6 341 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 DYDC2Q96IM9 177 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 MYL10Q9BUA6 226 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 MTG2Q9H4K7 406 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 EMC7Q9NPA0 242 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 SPTLC3Q9NUV7 552 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 POLR3BQ9NW08 1133 aaPredicted RBP5.31□□□□□ -1.56
VPS50-209ENST00000467326 USP36Q9P275 1121 aaKnown RBP5.31□□□□□ -1.56
VPS50-209ENST00000467326 PUF60Q9UHX1 559 aaKnown RBP5.31□□□□□ -1.56
VPS50-209ENST00000467326 ST6GALNAC2Q9UJ37 374 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 MAGEL2Q9UJ55 1249 aa5.31□□□□□ -1.56
VPS50-209ENST00000467326 ST20-MTHFSA0A0A6YYL1 179 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 MATN2O00339 956 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 AKAP8O43823 692 aaKnown RBP5.3□□□□□ -1.56
VPS50-209ENST00000467326 PRPF6O94906 941 aaKnown RBP5.3□□□□□ -1.56
VPS50-209ENST00000467326 CR2P20023 1033 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 SESN2P58004 480 aaPredicted RBP5.3□□□□□ -1.56
VPS50-209ENST00000467326 PHC1P78364 1004 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 ADAM17P78536 824 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 ZXDAP98168 799 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 DHCR24Q15392 516 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 GPR158Q5T848 1215 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 KIAA1841Q6NSI8 718 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 TCTN3Q6NUS6 607 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 KLHDC10Q6PID8 442 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 KANSL1Q7Z3B3 1105 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 DNERQ8NFT8 737 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 CFHR4Q92496 578 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 USP7Q93009 1102 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 FERMT2Q96AC1 680 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 KRTAP3-1Q9BYR8 98 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 PITHD1Q9GZP4 211 aaPredicted RBP5.3□□□□□ -1.56
VPS50-209ENST00000467326 MS4A5Q9H3V2 200 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 MSL2Q9HCI7 577 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 MSRAQ9UJ68 235 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 DENND2AQ9ULE3 1009 aa5.3□□□□□ -1.56
VPS50-209ENST00000467326 PATE3B3GLJ2 98 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 MAFGO15525 162 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 H2AFYO75367 372 aaKnown RBP5.29□□□□□ -1.56
VPS50-209ENST00000467326 CLSTN1O94985 981 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 ZNF20P17024 532 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 LSP1P33241 339 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 SOX5P35711 763 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 SELENOPP49908 381 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 HGFACQ04756 655 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 ADAM15Q13444 863 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 DDB1Q16531 1140 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 ESPNLQ6ZVH7 1005 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 TAX1BP1Q86VP1 789 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 ZNF610Q8N9Z0 462 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 CHAC2Q8WUX2 184 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 LPPQ93052 612 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 GFM2Q969S9 779 aaKnown RBP5.29□□□□□ -1.56
VPS50-209ENST00000467326 OR14A2Q96R54 314 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 HAPLN2Q9GZV7 340 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 C12orf65Q9H3J6 166 aaKnown RBP5.29□□□□□ -1.56
VPS50-209ENST00000467326 CD248Q9HCU0 757 aa5.29□□□□□ -1.56
VPS50-209ENST00000467326 CTDP1Q9Y5B0 961 aaPredicted RBP5.29□□□□□ -1.56
VPS50-209ENST00000467326 FOXS1O43638 330 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 KDM1AO60341 852 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 OPHN1O60890 802 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 RAD17O75943 681 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 BPIP17213 487 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 TERF2Q15554 542 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 ATP13A4Q4VNC1 1196 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 CT47A1Q5JQC4 288 aaPredicted RBP5.28□□□□□ -1.56
VPS50-209ENST00000467326 ZBTB41Q5SVQ8 909 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 UNQ6494/PRO21346Q6UXR6 183 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 UBR7Q8N806 425 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 SLC5A5Q92911 643 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 GCDHQ92947 438 aaPredicted RBP5.28□□□□□ -1.56
VPS50-209ENST00000467326 DVL3Q92997 716 aaPredicted RBP5.28□□□□□ -1.56
VPS50-209ENST00000467326 SLC7A6OSQ96CW6 309 aaPredicted RBP5.28□□□□□ -1.56
VPS50-209ENST00000467326 WDR92Q96MX6 357 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 TTC1Q99614 292 aa5.28□□□□□ -1.56
VPS50-209ENST00000467326 PLA2G12BQ9BX93 195 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms