RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ATXN3LQ9H3M9 355 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 MKNK2Q9HBH9 465 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 TCF20Q9UGU0 1960 aaKnown RBP6.64□□□□□ -1.35
PTCD3-207ENST00000467273 CACNA1AO00555 2505 aa6.64□□□□□ -1.35
PTCD3-207ENST00000467273 A0A1W2PQ45 241 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-207ENST00000467273 A0A1W2PQY0 241 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 LRRC37A2A6NM11 1700 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-207ENST00000467273 PQBP1O60828 265 aaKnown RBP6.63□□□□□ -1.35
PTCD3-207ENST00000467273 FBXO24O75426 580 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 CNMDO75829 334 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 CLSTN1O94985 981 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 ELP1O95163 1332 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 ZP2Q05996 745 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 RRP1BQ14684 758 aaKnown RBP6.63□□□□□ -1.35
PTCD3-207ENST00000467273 WDR78Q5VTH9 848 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 ATF7IPQ6VMQ6 1270 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 CATSPERGQ6ZRH7 1159 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 ERMP1Q7Z2K6 904 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 CERS3Q8IU89 383 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 ZNF654Q8IZM8 581 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 TMEM199Q8N511 208 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 FERMT2Q96AC1 680 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 WDR89Q96FK6 387 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-207ENST00000467273 NECAB3Q96P71 396 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-207ENST00000467273 FANCD2OSQ96PS1 177 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 KIAA1683Q9H0B3 1180 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 MROH8Q9H579 483 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 XPNPEP3Q9NQH7 507 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 ABCF2Q9UG63 623 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 TBX21Q9UL17 535 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 ZBTB21Q9ULJ3 1066 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 WDFY4Q6ZS81 3184 aa6.63□□□□□ -1.35
PTCD3-207ENST00000467273 MYO9BQ13459 2157 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 SIPA1L1O43166 1804 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 FANCIQ9NVI1 1328 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 NFIBO00712 420 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 PEX10O60683 326 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 C1QTNF9P0C862 333 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 ADORA2AP29274 412 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 PHKA1P46020 1223 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 KCNQ1P51787 676 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 ID3Q02535 119 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 MECOMQ03112 1051 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 TFF2Q03403 129 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 AP3B2Q13367 1082 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 FAM47AQ5JRC9 791 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 FYB2Q5VWT5 728 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 SLC4A10Q6U841 1118 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 C16orf59Q7L2K0 433 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 ATG9AQ7Z3C6 839 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 TOP6BLQ8N6T0 577 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 MB21D1Q8N884 522 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 DRC1Q96MC2 740 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 KRTAP9-3Q9BYQ3 159 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 HOXC10Q9NYD6 342 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 CTNND2Q9UQB3 1225 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 DIS3Q9Y2L1 958 aaKnown RBP6.62□□□□□ -1.35
PTCD3-207ENST00000467273 FOCADQ5VW36 1801 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 A0A0G2JMZ2 1700 aa6.62□□□□□ -1.35
PTCD3-207ENST00000467273 BAG3O95817 575 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 SLFN14P0C7P3 912 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 ALADP13716 330 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 AKR1A1P14550 325 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 ITPKAP23677 461 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 IL15P40933 162 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-207ENST00000467273 RFX5P48382 616 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-207ENST00000467273 ACLYP53396 1101 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 NHLH1Q02575 133 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 RASGRF1Q13972 1273 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 TTLL4Q14679 1199 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 WDR63Q8IWG1 891 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 TEX11Q8IYF3 940 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 CRACR2BQ8N4Y2 399 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-207ENST00000467273 KLHDC4Q8TBB5 520 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 NSUN4Q96CB9 384 aaKnown RBP6.61□□□□□ -1.35
PTCD3-207ENST00000467273 MAML3Q96JK9 1138 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 FEZ1Q99689 392 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 NOL10Q9BSC4 688 aaKnown RBP6.61□□□□□ -1.35
PTCD3-207ENST00000467273 NOC4LQ9BVI4 516 aaKnown RBP6.61□□□□□ -1.35
PTCD3-207ENST00000467273 SEZ6LQ9BYH1 1024 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 CCDC86Q9H6F5 360 aaKnown RBP6.61□□□□□ -1.35
PTCD3-207ENST00000467273 IL23AQ9NPF7 189 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 STARD7Q9NQZ5 370 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 KBTBD4Q9NVX7 518 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 BTBD7Q9P203 1132 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 PPM1HQ9ULR3 514 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 PCDHA11Q9Y5I1 949 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 GBF1Q92538 1859 aa6.61□□□□□ -1.35
PTCD3-207ENST00000467273 GRXCR1A8MXD5 290 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 TLR3O15455 904 aaKnown RBP6.6□□□□□ -1.35
PTCD3-207ENST00000467273 HLA-DOAP06340 250 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 INHBBP09529 407 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 CSF2RAP15509 400 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 VCAM1P19320 739 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 CST5P28325 142 aaPredicted RBP6.6□□□□□ -1.35
PTCD3-207ENST00000467273 AFMP43652 599 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 CDK7P50613 346 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 COG2Q14746 738 aa6.6□□□□□ -1.35
PTCD3-207ENST00000467273 MVPQ14764 893 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms