RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 KCNA2P16389 499 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 THPOP40225 353 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 ADAM17P78536 824 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 MRPS5P82675 430 aaKnown RBP8.08□□□□□ -1.12
SND1-205ENST00000467238 IKBKEQ14164 716 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 PLEKHG4Q58EX7 1191 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 KRT40Q6A162 431 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 C1orf229Q6ZS94 237 aaPredicted RBP8.08□□□□□ -1.12
SND1-205ENST00000467238 PRICKLE2Q7Z3G6 844 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 NLRX1Q86UT6 975 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 SKAP1Q86WV1 359 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 MICU3Q86XE3 530 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 FANCBQ8NB91 859 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 DBF4BQ8NFT6 615 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 GPRASP2Q96D09 838 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 RAD9AQ99638 391 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 PSTPIP2Q9H939 334 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 SETD4Q9NVD3 440 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 ZNF215Q9UL58 517 aaPredicted RBP8.08□□□□□ -1.12
SND1-205ENST00000467238 COL4A6Q14031 1691 aa8.08□□□□□ -1.12
SND1-205ENST00000467238 KRTAP4-8A0A0G2JLE6 195 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 SPDYE3A6NKU9 549 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 LILRA1O75019 489 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 ATP9AO75110 1047 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 CTSHP09668 335 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 GNAT1P11488 350 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 ITGB5P18084 799 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 PTGIRP43119 386 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 SP4Q02446 784 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 TFF2Q03403 129 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 GRB10Q13322 594 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 UBE2SQ16763 222 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 UTP14CQ5TAP6 766 aaKnown RBP8.07□□□□□ -1.12
SND1-205ENST00000467238 RNF20Q5VTR2 975 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 APOA5Q6Q788 366 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.07□□□□□ -1.12
SND1-205ENST00000467238 CENPQQ7L2Z9 268 aaPredicted RBP8.07□□□□□ -1.12
SND1-205ENST00000467238 CCDC82Q8N4S0 544 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 GIMAP8Q8ND71 665 aaPredicted RBP8.07□□□□□ -1.12
SND1-205ENST00000467238 GDPD5Q8WTR4 605 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 LMBR1Q8WVP7 490 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 CDHR1Q96JP9 859 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 OSBPL7Q9BZF2 842 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 UBIAD1Q9Y5Z9 338 aa8.07□□□□□ -1.12
SND1-205ENST00000467238 NRCAMQ92823 1304 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 WDFY4Q6ZS81 3184 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 GSTTP1A0A1W2PQM5 241 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 LINC01553A4QN01 128 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 C1QTNF9BB2RNN3 333 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 MAFGO15525 162 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 HOXB4P17483 251 aaPredicted RBP8.06□□□□□ -1.12
SND1-205ENST00000467238 SOX11P35716 441 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 TCF7P36402 384 aaPredicted RBP8.06□□□□□ -1.12
SND1-205ENST00000467238 ERVK-21P61565 698 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 HTRA4P83105 476 aaPredicted RBP8.06□□□□□ -1.12
SND1-205ENST00000467238 ARHGAP4P98171 946 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 EXOSC10Q01780 885 aaKnown RBP8.06□□□□□ -1.12
SND1-205ENST00000467238 NR1H3Q13133 447 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 MTMR1Q13613 665 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 ADCK5Q3MIX3 580 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 TSGA10IPQ3SY00 556 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 FAM26DQ5JW98 314 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 WWC2Q6AWC2 1192 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 FAM117BQ6P1L5 589 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 FOXR1Q6PIV2 292 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 DHX32Q7L7V1 743 aaKnown RBP8.06□□□□□ -1.12
SND1-205ENST00000467238 HEATR3Q7Z4Q2 680 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 RPAINQ86UA6 219 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 ALYREFQ86V81 257 aaKnown RBP8.06□□□□□ -1.12
SND1-205ENST00000467238 MYOCDQ8IZQ8 938 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 ADAMTS19Q8TE59 1207 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 SEPT1Q8WYJ6 367 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 SEPT8Q92599 483 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 TCEANC2Q96MN5 208 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 NEK1Q96PY6 1258 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 TGS1Q96RS0 853 aaKnown RBP8.06□□□□□ -1.12
SND1-205ENST00000467238 UHRF1Q96T88 793 aaPredicted RBP8.06□□□□□ -1.12
SND1-205ENST00000467238 SUV39H2Q9H5I1 410 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 SUGCTQ9HAC7 445 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 JADE2Q9NQC1 790 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 RBM28Q9NW13 759 aaKnown RBP8.06□□□□□ -1.12
SND1-205ENST00000467238 LMCD1Q9NZU5 365 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 PCDHA6Q9UN73 950 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 INSL6Q9Y581 213 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 PCDHA8Q9Y5H6 950 aa8.06□□□□□ -1.12
SND1-205ENST00000467238 PLXNA4Q9HCM2 1894 aa8.05□□□□□ -1.12
SND1-205ENST00000467238 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.05□□□□□ -1.12
SND1-205ENST00000467238 ZBTB43O43298 467 aa8.05□□□□□ -1.12
SND1-205ENST00000467238 AMHP03971 560 aa8.05□□□□□ -1.12
SND1-205ENST00000467238 NAPAP54920 295 aa8.05□□□□□ -1.12
SND1-205ENST00000467238 PPFIA1Q13136 1202 aa8.05□□□□□ -1.12
SND1-205ENST00000467238 RTN1Q16799 776 aa8.05□□□□□ -1.12
SND1-205ENST00000467238 AAK1Q2M2I8 961 aa8.05□□□□□ -1.12
SND1-205ENST00000467238 TAF2Q6P1X5 1199 aa8.05□□□□□ -1.12
SND1-205ENST00000467238 SYNE3Q6ZMZ3 975 aa8.05□□□□□ -1.12
SND1-205ENST00000467238 RIPOR1Q6ZS17 1223 aa8.05□□□□□ -1.12
SND1-205ENST00000467238 KRTAP19-1Q8IUB9 90 aa8.05□□□□□ -1.12
SND1-205ENST00000467238 TEX2Q8IWB9 1127 aa8.05□□□□□ -1.12
SND1-205ENST00000467238 APBB2Q92870 758 aa8.05□□□□□ -1.12
SND1-205ENST00000467238 TOP1MTQ969P6 601 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms