RNA–Protein interactions for RNA: ENST00000466525.1

GAPDH-206, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-206ENST00000466525 TMEM109Q9BVC6 243 aa16.33■□□□□ 0.21
GAPDH-206ENST00000466525 FAM129AQ9BZQ8 928 aa16.33■□□□□ 0.21
GAPDH-206ENST00000466525 AMFRQ9UKV5 643 aa16.33■□□□□ 0.21
GAPDH-206ENST00000466525 KIAA1024Q9UPX6 916 aa16.33■□□□□ 0.21
GAPDH-206ENST00000466525 CLEC11AQ9Y240 323 aa16.33■□□□□ 0.21
GAPDH-206ENST00000466525 ASAP2O43150 1006 aa16.33■□□□□ 0.2
GAPDH-206ENST00000466525 TMEM253P0C7T8 217 aa16.33■□□□□ 0.2
GAPDH-206ENST00000466525 DRD4P21917 467 aa16.33■□□□□ 0.2
GAPDH-206ENST00000466525 ITIH4Q14624 930 aa16.33■□□□□ 0.2
GAPDH-206ENST00000466525 SNCBQ16143 134 aa16.33■□□□□ 0.2
GAPDH-206ENST00000466525 EAPPQ56P03 285 aaPredicted RBP16.33■□□□□ 0.2
GAPDH-206ENST00000466525 ARSHQ5FYA8 562 aa16.33■□□□□ 0.2
GAPDH-206ENST00000466525 NELFCDQ8IXH7 590 aa16.33■□□□□ 0.2
GAPDH-206ENST00000466525 SYT2Q8N9I0 419 aaPredicted RBP16.33■□□□□ 0.2
GAPDH-206ENST00000466525 TBC1D22AQ8WUA7 517 aa16.33■□□□□ 0.2
GAPDH-206ENST00000466525 UBLCP1Q8WVY7 318 aaPredicted RBP16.33■□□□□ 0.2
GAPDH-206ENST00000466525 CCT6BQ92526 530 aa16.33■□□□□ 0.2
GAPDH-206ENST00000466525 DDX47Q9H0S4 455 aaKnown RBP16.33■□□□□ 0.2
GAPDH-206ENST00000466525 CNOT7Q9UIV1 285 aaKnown RBP16.33■□□□□ 0.2
GAPDH-206ENST00000466525 MCM8Q9UJA3 840 aa16.33■□□□□ 0.2
GAPDH-206ENST00000466525 E9PMD0 336 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 ZBTB5O15062 677 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 DAPK3O43293 454 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 MARCH6O60337 910 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 TTLL1O95922 423 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 NPR1P16066 1061 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 SLC9A1P19634 815 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 SLC8A1P32418 973 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 EPHX2P34913 555 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 DNA2P51530 1060 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 ARID5AQ03989 594 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 PPATQ06203 517 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 AP3B2Q13367 1082 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 GRIK5Q16478 980 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 DUPD1Q68J44 220 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 CYB5D1Q6P9G0 228 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 PARP9Q8IXQ6 854 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 ERMNQ8TAM6 284 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 RFFLQ8WZ73 363 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 FMO2Q99518 471 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 BEGAINQ9BUH8 593 aa16.32■□□□□ 0.2
GAPDH-206ENST00000466525 CNOT8Q9UFF9 292 aaKnown RBP16.32■□□□□ 0.2
GAPDH-206ENST00000466525 NOVA2Q9UNW9 492 aaKnown RBP16.32■□□□□ 0.2
GAPDH-206ENST00000466525 DDX3XO00571 662 aaKnown RBP eCLIP16.31■□□□□ 0.23e-49■■□□□ 11.9
GAPDH-206ENST00000466525 HSPA8P11142 646 aaKnown RBP16.31■□□□□ 0.2
GAPDH-206ENST00000466525 STAT1P42224 750 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 ECE1P42892 770 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 SCTRP47872 440 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 DHX9Q08211 1270 aaKnown RBP16.31■□□□□ 0.2
GAPDH-206ENST00000466525 GIT2Q14161 759 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 KRT71Q3SY84 523 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 ODF2Q5BJF6 829 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 BTNL9Q6UXG8 535 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 TEX2Q8IWB9 1127 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 ADGRF4Q8IZF3 695 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 ATP8B4Q8TF62 1192 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 CHMP6Q96FZ7 201 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 XPO6Q96QU8 1125 aaKnown RBP16.31■□□□□ 0.2
GAPDH-206ENST00000466525 SYT11Q9BT88 431 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 MKNK1Q9BUB5 465 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 AP1M1Q9BXS5 423 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 AMACRQ9UHK6 382 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 GOLGA6L10A0A0M3HER8 536 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 POTEB3A0JP26 581 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 CCDC169A6NNP5 214 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 DNM1LO00429 736 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 DDX3YO15523 660 aaKnown RBP16.31■□□□□ 0.2
GAPDH-206ENST00000466525 MGRN1O60291 552 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 PPP1R11O60927 126 aaPredicted RBP16.31■□□□□ 0.2
GAPDH-206ENST00000466525 RPA1P27694 616 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 RNASE9P60153 205 aaKnown RBP16.31■□□□□ 0.2
GAPDH-206ENST00000466525 MAGOHP61326 146 aaKnown RBP16.31■□□□□ 0.2
GAPDH-206ENST00000466525 QPCTQ16769 361 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 POTEBQ6S5H4 581 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 DDX42Q86XP3 938 aaKnown RBP eCLIP16.31■□□□□ 0.2
GAPDH-206ENST00000466525 OR2W6PQ8NHA6 318 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 OLIG1Q8TAK6 271 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 C7orf43Q8WVR3 580 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 CRYGNQ8WXF5 182 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 SLC35C1Q96A29 364 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 MAGOHBQ96A72 148 aaKnown RBP16.31■□□□□ 0.2
GAPDH-206ENST00000466525 BORCS6Q96GS4 357 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 PSTPIP2Q9H939 334 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 ZDHHC18Q9NUE0 388 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 JAG2Q9Y219 1238 aa16.31■□□□□ 0.2
GAPDH-206ENST00000466525 ANKRD31Q8N7Z5 1873 aa16.3■□□□□ 0.2
GAPDH-206ENST00000466525 UBE4BO95155 1302 aa16.3■□□□□ 0.2
GAPDH-206ENST00000466525 FRMPD2Q68DX3 1309 aaPredicted RBP16.3■□□□□ 0.2
GAPDH-206ENST00000466525 EIF3DO15371 548 aaKnown RBP eCLIP16.3■□□□□ 0.2
GAPDH-206ENST00000466525 TTI1O43156 1089 aa16.3■□□□□ 0.2
GAPDH-206ENST00000466525 SSBP05455 408 aaKnown RBP eCLIP16.3■□□□□ 0.2
GAPDH-206ENST00000466525 KRT18P05783 430 aaKnown RBP16.3■□□□□ 0.2
GAPDH-206ENST00000466525 ACTN1P12814 892 aa16.3■□□□□ 0.2
GAPDH-206ENST00000466525 GAP43P17677 238 aa16.3■□□□□ 0.2
GAPDH-206ENST00000466525 ERCC3P19447 782 aa16.3■□□□□ 0.2
GAPDH-206ENST00000466525 RFX1P22670 979 aa16.3■□□□□ 0.2
GAPDH-206ENST00000466525 ATP2B4P23634 1241 aa16.3■□□□□ 0.2
GAPDH-206ENST00000466525 HOXD13P35453 343 aa16.3■□□□□ 0.2
GAPDH-206ENST00000466525 MMP13P45452 471 aa16.3■□□□□ 0.2
GAPDH-206ENST00000466525 SPIRE1Q08AE8 756 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms