RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 TMEM60Q9H2L4 133 aa19.5■□□□□ 0.71
CPSF4-209ENST00000465132 NSUN3Q9H649 340 aaKnown RBP19.5■□□□□ 0.71
CPSF4-209ENST00000465132 RC3H2Q9HBD1 1191 aaKnown RBP19.5■□□□□ 0.71
CPSF4-209ENST00000465132 TFIP11Q9UBB9 837 aaKnown RBP19.5■□□□□ 0.71
CPSF4-209ENST00000465132 SRPRBQ9Y5M8 271 aaKnown RBP19.5■□□□□ 0.71
CPSF4-209ENST00000465132 C5orf67F2Z3F1 127 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 H3BQ06 376 aaPredicted RBP19.49■□□□□ 0.71
CPSF4-209ENST00000465132 ATG7O95352 703 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 RB1P06400 928 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 LINC00271P0C7V0 271 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 MUTP22033 750 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 CTNNB1P35222 781 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 BMPR1AP36894 532 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 PTPAQ15257 358 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 EPHA7Q15375 998 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 NCAPH2Q6IBW4 605 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 PLPPR4Q7Z2D5 763 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 PABPC5Q96DU9 382 aaKnown RBP19.49■□□□□ 0.71
CPSF4-209ENST00000465132 GBP4Q96PP9 640 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 PCYT2Q99447 389 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 RCOR1Q9UKL0 485 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 VAV3Q9UKW4 847 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 CDY2AQ9Y6F7 541 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 ADGRA3Q8IWK6 1321 aa19.49■□□□□ 0.71
CPSF4-209ENST00000465132 MYH9P35579 1960 aaKnown RBP19.48■□□□□ 0.71
CPSF4-209ENST00000465132 VWA3AA6NCI4 1184 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 GOLGA6L4A6NEF3 574 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 RRN3P2A6NIE6 340 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 WNT7AO00755 349 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 CHMP2AO43633 222 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 CUTAO60888 179 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 P4HBP07237 508 aaKnown RBP19.48■□□□□ 0.71
CPSF4-209ENST00000465132 ME1P48163 572 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 IGBP1P78318 339 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 MRPS6P82932 125 aaKnown RBP19.48■□□□□ 0.71
CPSF4-209ENST00000465132 ABHD15Q6UXT9 468 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 TSHZ1Q6ZSZ6 1077 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 IGSF22Q8N9C0 903 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 ZBTB10Q96DT7 871 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 FAM167AQ96KS9 214 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 UNC45AQ9H3U1 944 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 ZNF302Q9NR11 478 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 HCN4Q9Y3Q4 1203 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 RWDD3Q9Y3V2 267 aa19.48■□□□□ 0.71
CPSF4-209ENST00000465132 ARIH1Q9Y4X5 557 aaPredicted RBP19.48■□□□□ 0.71
CPSF4-209ENST00000465132 FAM86C2PA6NEL3 165 aa19.47■□□□□ 0.71
CPSF4-209ENST00000465132 GOLGA6L22H0YM25 854 aa19.47■□□□□ 0.71
CPSF4-209ENST00000465132 RPLP2P05387 115 aaKnown RBP19.47■□□□□ 0.71
CPSF4-209ENST00000465132 INSRRP14616 1297 aa19.47■□□□□ 0.71
CPSF4-209ENST00000465132 UBA7P41226 1012 aa19.47■□□□□ 0.71
CPSF4-209ENST00000465132 STAT5BP51692 787 aa19.47■□□□□ 0.71
CPSF4-209ENST00000465132 B3GNT9Q6UX72 402 aa19.47■□□□□ 0.71
CPSF4-209ENST00000465132 ZNF579Q8NAF0 562 aaKnown RBP19.47■□□□□ 0.71
CPSF4-209ENST00000465132 CLP1Q92989 425 aaKnown RBP19.47■□□□□ 0.71
CPSF4-209ENST00000465132 ZNF689Q96CS4 500 aaPredicted RBP19.47■□□□□ 0.71
CPSF4-209ENST00000465132 PYM1Q9BRP8 204 aaKnown RBP19.47■□□□□ 0.71
CPSF4-209ENST00000465132 C11orf84Q9BUA3 381 aaPredicted RBP19.47■□□□□ 0.71
CPSF4-209ENST00000465132 NT5C3AQ9H0P0 336 aa19.47■□□□□ 0.71
CPSF4-209ENST00000465132 FAM49AQ9H0Q0 323 aaPredicted RBP19.47■□□□□ 0.71
CPSF4-209ENST00000465132 AGO3Q9H9G7 860 aaKnown RBP19.47■□□□□ 0.71
CPSF4-209ENST00000465132 KDM3AQ9Y4C1 1321 aa19.47■□□□□ 0.71
CPSF4-209ENST00000465132 TCHHQ07283 1943 aa19.47■□□□□ 0.71
CPSF4-209ENST00000465132 GRM6O15303 877 aa19.46■□□□□ 0.71
CPSF4-209ENST00000465132 SSTR3P32745 418 aaPredicted RBP19.46■□□□□ 0.71
CPSF4-209ENST00000465132 QARSP47897 775 aaKnown RBP19.46■□□□□ 0.71
CPSF4-209ENST00000465132 PSMC5P62195 406 aa19.46■□□□□ 0.71
CPSF4-209ENST00000465132 EP400NLQ6ZTU2 488 aa19.46■□□□□ 0.71
CPSF4-209ENST00000465132 LINC01599Q8WXQ3 324 aa19.46■□□□□ 0.71
CPSF4-209ENST00000465132 CALML4Q96GE6 196 aa19.46■□□□□ 0.71
CPSF4-209ENST00000465132 CDK5RAP3Q96JB5 506 aa19.46■□□□□ 0.71
CPSF4-209ENST00000465132 POLR3CQ9BUI4 534 aaPredicted RBP19.46■□□□□ 0.71
CPSF4-209ENST00000465132 LMAN2LQ9H0V9 348 aa19.46■□□□□ 0.71
CPSF4-209ENST00000465132 ZSWIM4Q9H7M6 989 aa19.46■□□□□ 0.71
CPSF4-209ENST00000465132 TUFT1Q9NNX1 390 aa19.46■□□□□ 0.71
CPSF4-209ENST00000465132 NRBP2Q9NSY0 501 aa19.46■□□□□ 0.71
CPSF4-209ENST00000465132 CCDC39Q9UFE4 941 aa19.46■□□□□ 0.71
CPSF4-209ENST00000465132 KAT6AQ92794 2004 aa19.46■□□□□ 0.71
CPSF4-209ENST00000465132 RALGAPA2Q2PPJ7 1873 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 NLRC5Q86WI3 1866 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 IGKV6D-21A0A0A0MT36 114 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 NCK2O43639 380 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 DGKIO75912 1065 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 CCNE2O96020 404 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 MARCKSP29966 332 aaPredicted RBP19.45■□□□□ 0.7
CPSF4-209ENST00000465132 CD52P31358 61 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 SPIRE1Q08AE8 756 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 BTG3Q14201 252 aaPredicted RBP19.45■□□□□ 0.7
CPSF4-209ENST00000465132 IER5Q5VY09 327 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 SWSAP1Q6NVH7 229 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 PDXDC2PQ6P474 469 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 OTUD6AQ7L8S5 288 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 CKAP2LQ8IYA6 745 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 EXOC8Q8IYI6 725 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 RASSF8Q8NHQ8 419 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 LEO1Q8WVC0 666 aaPredicted RBP19.45■□□□□ 0.7
CPSF4-209ENST00000465132 UIMC1Q96RL1 719 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 CLDND1Q9NY35 253 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 FAM13BQ9NYF5 915 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 TRPC6Q9Y210 931 aa19.45■□□□□ 0.7
CPSF4-209ENST00000465132 SQORQ9Y6N5 450 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms