RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ZKSCAN2Q63HK3 967 aa10.92□□□□□ -0.66
APP-213ENST00000464867 KIAA1841Q6NSI8 718 aa10.92□□□□□ -0.66
APP-213ENST00000464867 CEP85Q6P2H3 762 aa10.92□□□□□ -0.66
APP-213ENST00000464867 BPHLQ86WA6 291 aaPredicted RBP10.92□□□□□ -0.66
APP-213ENST00000464867 FTSJ3Q8IY81 847 aaKnown RBP10.92□□□□□ -0.66
APP-213ENST00000464867 LMBR1Q8WVP7 490 aa10.92□□□□□ -0.66
APP-213ENST00000464867 ATRIPQ8WXE1 791 aa10.92□□□□□ -0.66
APP-213ENST00000464867 MRPS27Q92552 414 aaKnown RBP10.92□□□□□ -0.66
APP-213ENST00000464867 PXMP2Q9NR77 195 aa10.92□□□□□ -0.66
APP-213ENST00000464867 DZANK1Q9NVP4 752 aa10.92□□□□□ -0.66
APP-213ENST00000464867 IGSF9Q9P2J2 1179 aa10.92□□□□□ -0.66
APP-213ENST00000464867 SIT1Q9Y3P8 196 aa10.92□□□□□ -0.66
APP-213ENST00000464867 HCFC2Q9Y5Z7 792 aa10.92□□□□□ -0.66
APP-213ENST00000464867 TBKBP1A7MCY6 615 aa10.91□□□□□ -0.66
APP-213ENST00000464867 HIDE1A8MVS5 230 aa10.91□□□□□ -0.66
APP-213ENST00000464867 M0QZ92 97 aa10.91□□□□□ -0.66
APP-213ENST00000464867 ZFYP08048 801 aaPredicted RBP10.91□□□□□ -0.66
APP-213ENST00000464867 LAG3P18627 525 aa10.91□□□□□ -0.66
APP-213ENST00000464867 CD52P31358 61 aa10.91□□□□□ -0.66
APP-213ENST00000464867 CA8P35219 290 aa10.91□□□□□ -0.66
APP-213ENST00000464867 GRM5P41594 1212 aa10.91□□□□□ -0.66
APP-213ENST00000464867 WDR4P57081 412 aaKnown RBP10.91□□□□□ -0.66
APP-213ENST00000464867 IER5Q5VY09 327 aa10.91□□□□□ -0.66
APP-213ENST00000464867 ITPRIPQ8IWB1 547 aa10.91□□□□□ -0.66
APP-213ENST00000464867 COLGALT1Q8NBJ5 622 aa10.91□□□□□ -0.66
APP-213ENST00000464867 TBC1D5Q92609 795 aa10.91□□□□□ -0.66
APP-213ENST00000464867 OSBP2Q969R2 916 aa10.91□□□□□ -0.66
APP-213ENST00000464867 TBC1D17Q9HA65 648 aa10.91□□□□□ -0.66
APP-213ENST00000464867 KCNK12Q9HB15 430 aa10.91□□□□□ -0.66
APP-213ENST00000464867 COL20A1Q9P218 1284 aa10.91□□□□□ -0.66
APP-213ENST00000464867 MRPL11Q9Y3B7 192 aaKnown RBP10.91□□□□□ -0.66
APP-213ENST00000464867 CDY2AQ9Y6F7 541 aa10.91□□□□□ -0.66
APP-213ENST00000464867 SQORQ9Y6N5 450 aa10.91□□□□□ -0.66
APP-213ENST00000464867 MYH6P13533 1939 aa10.91□□□□□ -0.66
APP-213ENST00000464867 ZFYVE26Q68DK2 2539 aa10.91□□□□□ -0.66
APP-213ENST00000464867 FNDC1Q4ZHG4 1894 aaPredicted RBP10.9□□□□□ -0.66
APP-213ENST00000464867 RNF113AO15541 343 aaKnown RBP10.9□□□□□ -0.66
APP-213ENST00000464867 DCNP07585 359 aaKnown RBP10.9□□□□□ -0.66
APP-213ENST00000464867 ARP10275 920 aa10.9□□□□□ -0.66
APP-213ENST00000464867 UBA1P22314 1058 aaKnown RBP10.9□□□□□ -0.66
APP-213ENST00000464867 GATMP50440 423 aa10.9□□□□□ -0.66
APP-213ENST00000464867 PLCB3Q01970 1234 aa10.9□□□□□ -0.66
APP-213ENST00000464867 MGAT3Q09327 533 aa10.9□□□□□ -0.66
APP-213ENST00000464867 PAK2Q13177 524 aa10.9□□□□□ -0.66
APP-213ENST00000464867 SMC1AQ14683 1233 aaKnown RBP10.9□□□□□ -0.66
APP-213ENST00000464867 FAM43BQ6ZT52 329 aaPredicted RBP10.9□□□□□ -0.66
APP-213ENST00000464867 CCDC149Q6ZUS6 474 aa10.9□□□□□ -0.66
APP-213ENST00000464867 RTN4RL1Q86UN2 441 aaPredicted RBP10.9□□□□□ -0.66
APP-213ENST00000464867 LRRN4Q8WUT4 740 aa10.9□□□□□ -0.66
APP-213ENST00000464867 LINC01599Q8WXQ3 324 aa10.9□□□□□ -0.66
APP-213ENST00000464867 TMEM47Q9BQJ4 181 aa10.9□□□□□ -0.66
APP-213ENST00000464867 C1QTNF2Q9BXJ5 285 aa10.9□□□□□ -0.66
APP-213ENST00000464867 TYW1Q9NV66 732 aaKnown RBP10.9□□□□□ -0.66
APP-213ENST00000464867 CA14Q9ULX7 337 aa10.9□□□□□ -0.66
APP-213ENST00000464867 CEP295Q9C0D2 2601 aa10.9□□□□□ -0.66
APP-213ENST00000464867 SOBPA7XYQ1 873 aa10.89□□□□□ -0.67
APP-213ENST00000464867 TERTO14746 1132 aaKnown RBP10.89□□□□□ -0.67
APP-213ENST00000464867 RAB11FIP3O75154 756 aa10.89□□□□□ -0.67
APP-213ENST00000464867 CFBP00751 764 aa10.89□□□□□ -0.67
APP-213ENST00000464867 PDHBP11177 359 aa10.89□□□□□ -0.67
APP-213ENST00000464867 PPM1AP35813 382 aa10.89□□□□□ -0.67
APP-213ENST00000464867 SARSP49591 514 aaKnown RBP10.89□□□□□ -0.67
APP-213ENST00000464867 ADAM17P78536 824 aa10.89□□□□□ -0.67
APP-213ENST00000464867 MRPS6P82932 125 aaKnown RBP10.89□□□□□ -0.67
APP-213ENST00000464867 SP2Q02086 613 aa10.89□□□□□ -0.67
APP-213ENST00000464867 ZNF543Q08ER8 600 aa10.89□□□□□ -0.67
APP-213ENST00000464867 NEDD9Q14511 834 aa10.89□□□□□ -0.67
APP-213ENST00000464867 ZNF528Q3MIS6 628 aa10.89□□□□□ -0.67
APP-213ENST00000464867 GPATCH4Q5T3I0 446 aaKnown RBP10.89□□□□□ -0.67
APP-213ENST00000464867 UTP14CQ5TAP6 766 aaKnown RBP10.89□□□□□ -0.67
APP-213ENST00000464867 MRPL43Q8N983 215 aaKnown RBP10.89□□□□□ -0.67
APP-213ENST00000464867 ARMC2Q8NEN0 867 aa10.89□□□□□ -0.67
APP-213ENST00000464867 DNAJB3Q8WWF6 145 aa10.89□□□□□ -0.67
APP-213ENST00000464867 DDX1Q92499 740 aaKnown RBP10.89□□□□□ -0.67
APP-213ENST00000464867 ZFP42Q96MM3 310 aa10.89□□□□□ -0.67
APP-213ENST00000464867 AGO3Q9H9G7 860 aaKnown RBP10.89□□□□□ -0.67
APP-213ENST00000464867 TOMM22Q9NS69 142 aa10.89□□□□□ -0.67
APP-213ENST00000464867 GMEB2Q9UKD1 530 aa10.89□□□□□ -0.67
APP-213ENST00000464867 PCDHGA2Q9Y5H1 932 aa10.89□□□□□ -0.67
APP-213ENST00000464867 LOXHD1Q8IVV2 1947 aa10.89□□□□□ -0.67
APP-213ENST00000464867 CNOT1A5YKK6 2376 aaKnown RBP10.88□□□□□ -0.67
APP-213ENST00000464867 KRBA1A5PL33 1030 aa10.88□□□□□ -0.67
APP-213ENST00000464867 LAMTOR5O43504 91 aa10.88□□□□□ -0.67
APP-213ENST00000464867 CLASP2O75122 1294 aaKnown RBP10.88□□□□□ -0.67
APP-213ENST00000464867 HMMRO75330 724 aa10.88□□□□□ -0.67
APP-213ENST00000464867 NOVP48745 357 aa10.88□□□□□ -0.67
APP-213ENST00000464867 PPFIA1Q13136 1202 aa10.88□□□□□ -0.67
APP-213ENST00000464867 CDC37Q16543 378 aaPredicted RBP10.88□□□□□ -0.67
APP-213ENST00000464867 GNPTABQ3T906 1256 aa10.88□□□□□ -0.67
APP-213ENST00000464867 PHLDB3Q6NSJ2 640 aa10.88□□□□□ -0.67
APP-213ENST00000464867 VSIG10LQ86VR7 867 aa10.88□□□□□ -0.67
APP-213ENST00000464867 C12orf76Q8N812 135 aaPredicted RBP10.88□□□□□ -0.67
APP-213ENST00000464867 KBTBD3Q8NAB2 608 aa10.88□□□□□ -0.67
APP-213ENST00000464867 NETO1Q8TDF5 533 aa10.88□□□□□ -0.67
APP-213ENST00000464867 PDCD2LQ9BRP1 358 aa10.88□□□□□ -0.67
APP-213ENST00000464867 ZFAND3Q9H8U3 227 aa10.88□□□□□ -0.67
APP-213ENST00000464867 TUBE1Q9UJT0 475 aa10.88□□□□□ -0.67
APP-213ENST00000464867 PADI3Q9ULW8 664 aa10.88□□□□□ -0.67
APP-213ENST00000464867 SMG5Q9UPR3 1016 aaKnown RBP10.88□□□□□ -0.67
APP-213ENST00000464867 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms