RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 TMEM176AQ96HP8 235 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 PLEKHG4BQ96PX9 1271 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 SLC6A15Q9H2J7 730 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 AGO3Q9H9G7 860 aaKnown RBP6.21□□□□□ -1.42
ITGB1-208ENST00000464001 DENND2AQ9ULE3 1009 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 GIT1Q9Y2X7 761 aa6.21□□□□□ -1.42
ITGB1-208ENST00000464001 TNPO3Q9Y5L0 923 aaKnown RBP6.21□□□□□ -1.42
ITGB1-208ENST00000464001 A0A1W2PRX2 142 aa6.2□□□□□ -1.42
ITGB1-208ENST00000464001 CAPN14A8MX76 684 aa6.2□□□□□ -1.42
ITGB1-208ENST00000464001 DVL2O14641 736 aa6.2□□□□□ -1.42
ITGB1-208ENST00000464001 ZNF202O95125 648 aa6.2□□□□□ -1.42
ITGB1-208ENST00000464001 MCM7P33993 719 aa6.2□□□□□ -1.42
ITGB1-208ENST00000464001 ADCY7P51828 1080 aa6.2□□□□□ -1.42
ITGB1-208ENST00000464001 ATP2C1P98194 919 aaPredicted RBP6.2□□□□□ -1.42
ITGB1-208ENST00000464001 SLFN12LQ6IEE8 588 aa6.2□□□□□ -1.42
ITGB1-208ENST00000464001 KCMF1Q9P0J7 381 aa6.2□□□□□ -1.42
ITGB1-208ENST00000464001 TRAF5O00463 557 aa6.19□□□□□ -1.42
ITGB1-208ENST00000464001 DNAJC8O75937 253 aaPredicted RBP6.19□□□□□ -1.42
ITGB1-208ENST00000464001 C1SP09871 688 aa6.19□□□□□ -1.42
ITGB1-208ENST00000464001 TGFB2P61812 414 aa6.19□□□□□ -1.42
ITGB1-208ENST00000464001 DGCR2P98153 550 aa6.19□□□□□ -1.42
ITGB1-208ENST00000464001 SQSTM1Q13501 440 aa6.19□□□□□ -1.42
ITGB1-208ENST00000464001 FHL2Q14192 279 aa6.19□□□□□ -1.42
ITGB1-208ENST00000464001 PIK3R6Q5UE93 754 aa6.19□□□□□ -1.42
ITGB1-208ENST00000464001 ANKRD35Q8N283 1001 aa6.19□□□□□ -1.42
ITGB1-208ENST00000464001 KIAA1958Q8N8K9 716 aa6.19□□□□□ -1.42
ITGB1-208ENST00000464001 OR5AN1Q8NGI8 311 aa6.19□□□□□ -1.42
ITGB1-208ENST00000464001 TUBGCP5Q96RT8 1024 aa6.19□□□□□ -1.42
ITGB1-208ENST00000464001 SLITRK6Q9H5Y7 841 aa6.19□□□□□ -1.42
ITGB1-208ENST00000464001 B4GALT6Q9UBX8 382 aa6.19□□□□□ -1.42
ITGB1-208ENST00000464001 MAGEL2Q9UJ55 1249 aa6.19□□□□□ -1.42
ITGB1-208ENST00000464001 ING1Q9UK53 422 aaPredicted RBP6.19□□□□□ -1.42
ITGB1-208ENST00000464001 RBM8AQ9Y5S9 174 aaKnown RBP6.19□□□□□ -1.42
ITGB1-208ENST00000464001 GOLGA8BA8MQT2 603 aa6.18□□□□□ -1.42
ITGB1-208ENST00000464001 MAFGO15525 162 aa6.18□□□□□ -1.42
ITGB1-208ENST00000464001 ANTXR2P58335 489 aa6.18□□□□□ -1.42
ITGB1-208ENST00000464001 ADCY1Q08828 1119 aa6.18□□□□□ -1.42
ITGB1-208ENST00000464001 EPHA7Q15375 998 aa6.18□□□□□ -1.42
ITGB1-208ENST00000464001 PRAMEF9Q5VWM5 478 aa6.18□□□□□ -1.42
ITGB1-208ENST00000464001 CACTINQ8WUQ7 758 aaKnown RBP6.18□□□□□ -1.42
ITGB1-208ENST00000464001 RPGRQ92834 1020 aaKnown RBP6.18□□□□□ -1.42
ITGB1-208ENST00000464001 C16orf92Q96LL3 132 aa6.18□□□□□ -1.42
ITGB1-208ENST00000464001 ZNF703Q9H7S9 590 aaPredicted RBP6.18□□□□□ -1.42
ITGB1-208ENST00000464001 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
ITGB1-208ENST00000464001 C2orf78A6NCI8 922 aa6.17□□□□□ -1.42
ITGB1-208ENST00000464001 NARSO43776 548 aaKnown RBP6.17□□□□□ -1.42
ITGB1-208ENST00000464001 JMJD7P0C870 316 aa6.17□□□□□ -1.42
ITGB1-208ENST00000464001 STAT3P40763 770 aa6.17□□□□□ -1.42
ITGB1-208ENST00000464001 BCAR1P56945 870 aa6.17□□□□□ -1.42
ITGB1-208ENST00000464001 BPIFB4P59827 614 aa6.17□□□□□ -1.42
ITGB1-208ENST00000464001 TUBA3CQ13748 450 aa6.17□□□□□ -1.42
ITGB1-208ENST00000464001 ZNF460Q14592 562 aa6.17□□□□□ -1.42
ITGB1-208ENST00000464001 TUBA3EQ6PEY2 450 aa6.17□□□□□ -1.42
ITGB1-208ENST00000464001 SH3TC2Q8TF17 1288 aa6.17□□□□□ -1.42
ITGB1-208ENST00000464001 RPL10LQ96L21 214 aaKnown RBP6.17□□□□□ -1.42
ITGB1-208ENST00000464001 MENTQ9BUN1 341 aa6.17□□□□□ -1.42
ITGB1-208ENST00000464001 ZSWIM4Q9H7M6 989 aa6.17□□□□□ -1.42
ITGB1-208ENST00000464001 PARPBPQ9NWS1 579 aa6.17□□□□□ -1.42
ITGB1-208ENST00000464001 SYNPO2Q9UMS6 1093 aa6.17□□□□□ -1.42
ITGB1-208ENST00000464001 CBX4O00257 560 aa6.16□□□□□ -1.42
ITGB1-208ENST00000464001 DAPK3O43293 454 aa6.16□□□□□ -1.42
ITGB1-208ENST00000464001 RFPL3O75679 317 aa6.16□□□□□ -1.42
ITGB1-208ENST00000464001 CRHR2Q13324 411 aa6.16□□□□□ -1.42
ITGB1-208ENST00000464001 TCIRG1Q13488 830 aa6.16□□□□□ -1.42
ITGB1-208ENST00000464001 SAFB2Q14151 953 aaKnown RBP eCLIP6.16□□□□□ -1.42
ITGB1-208ENST00000464001 ACAP1Q15027 740 aa6.16□□□□□ -1.42
ITGB1-208ENST00000464001 CFAP100Q494V2 611 aa6.16□□□□□ -1.42
ITGB1-208ENST00000464001 GAGE13Q4V321 117 aa6.16□□□□□ -1.42
ITGB1-208ENST00000464001 SPTY2D1Q68D10 685 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-208ENST00000464001 CDCA2Q69YH5 1023 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-208ENST00000464001 IGFL4Q6B9Z1 124 aa6.16□□□□□ -1.42
ITGB1-208ENST00000464001 BMP8AQ7Z5Y6 402 aa6.16□□□□□ -1.42
ITGB1-208ENST00000464001 TMPRSS6Q8IU80 811 aa6.16□□□□□ -1.42
ITGB1-208ENST00000464001 ANKRD53Q8N9V6 530 aa6.16□□□□□ -1.42
ITGB1-208ENST00000464001 NKD2Q969F2 451 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-208ENST00000464001 DYDC2Q96IM9 177 aa6.16□□□□□ -1.42
ITGB1-208ENST00000464001 WDR92Q96MX6 357 aa6.16□□□□□ -1.42
ITGB1-208ENST00000464001 POLR3BQ9NW08 1133 aaPredicted RBP6.16□□□□□ -1.42
ITGB1-208ENST00000464001 SH3BP1Q9Y3L3 701 aa6.16□□□□□ -1.42
ITGB1-208ENST00000464001 PPP1R12AO14974 1030 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-208ENST00000464001 ASMTLO95671 621 aa6.15□□□□□ -1.42
ITGB1-208ENST00000464001 SDSP20132 328 aa6.15□□□□□ -1.42
ITGB1-208ENST00000464001 PTX3P26022 381 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-208ENST00000464001 RRP1BQ14684 758 aaKnown RBP6.15□□□□□ -1.42
ITGB1-208ENST00000464001 TIGD7Q6NT04 549 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-208ENST00000464001 FAM111BQ6SJ93 734 aa6.15□□□□□ -1.42
ITGB1-208ENST00000464001 GAREM2Q75VX8 874 aa6.15□□□□□ -1.42
ITGB1-208ENST00000464001 GSPT2Q8IYD1 628 aaKnown RBP6.15□□□□□ -1.42
ITGB1-208ENST00000464001 SYNPOQ8N3V7 929 aa6.15□□□□□ -1.42
ITGB1-208ENST00000464001 AMER2Q8N7J2 671 aa6.15□□□□□ -1.42
ITGB1-208ENST00000464001 PLA2G15Q8NCC3 412 aa6.15□□□□□ -1.42
ITGB1-208ENST00000464001 MIEF2Q96C03 454 aa6.15□□□□□ -1.42
ITGB1-208ENST00000464001 GPHA2Q96T91 129 aa6.15□□□□□ -1.42
ITGB1-208ENST00000464001 TMEM260Q9NX78 707 aa6.15□□□□□ -1.42
ITGB1-208ENST00000464001 MAGEC2Q9UBF1 373 aaPredicted RBP6.15□□□□□ -1.42
ITGB1-208ENST00000464001 ZKSCAN5Q9Y2L8 839 aa6.15□□□□□ -1.42
ITGB1-208ENST00000464001 SLC9A1P19634 815 aa6.14□□□□□ -1.43
ITGB1-208ENST00000464001 ADCY2Q08462 1091 aa6.14□□□□□ -1.43
ITGB1-208ENST00000464001 PABPC4Q13310 644 aaKnown RBP eCLIP6.14□□□□□ -1.43
ITGB1-208ENST00000464001 KRT40Q6A162 431 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms