RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 ZNF268Q14587 947 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 SGSM1Q2NKQ1 1148 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 ZC2HC1CQ53FD0 456 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 BEND3Q5T5X7 828 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 PHLDB3Q6NSJ2 640 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 NEK10Q6ZWH5 1172 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 VASH1Q7L8A9 365 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 RAB11FIP4Q86YS3 637 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 APLFQ8IW19 511 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 OR2W6PQ8NHA6 318 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 CEP70Q8NHQ1 597 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 DNAJC9Q8WXX5 260 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 RAPGEF5Q92565 580 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 BHMTQ93088 406 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 MEIS3Q99687 375 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 PUS3Q9BZE2 481 aaKnown RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 NACAP1Q9BZK3 213 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 HSD3B7Q9H2F3 369 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 IL1RAPL2Q9NP60 686 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 ATAD3AQ9NVI7 634 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 TUBA8Q9NY65 449 aaPredicted RBP3.91□□□□□ -1.78
COL8A1-205ENST00000463753 CHPF2Q9P2E5 772 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 SSX2IPQ9Y2D8 614 aa3.91□□□□□ -1.78
COL8A1-205ENST00000463753 KIF20BQ96Q89 1820 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 TSPY2A6NKD2 308 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 FAM155AB1AL88 458 aaPredicted RBP3.9□□□□□ -1.78
COL8A1-205ENST00000463753 LILRA1O75019 489 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 ITGA2BP08514 1039 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 TSPY3P0CV98 308 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 TSPY8P0CW00 308 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 MSH2P43246 934 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 KIF11P52732 1056 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 EPHB4P54760 987 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 AMPD2Q01433 879 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 TSPY1Q01534 308 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 CKAP4Q07065 602 aaKnown RBP3.9□□□□□ -1.78
COL8A1-205ENST00000463753 ITGB3BPQ13352 177 aaPredicted RBP3.9□□□□□ -1.78
COL8A1-205ENST00000463753 COL9A3Q14050 684 aaPredicted RBP3.9□□□□□ -1.78
COL8A1-205ENST00000463753 SEPT2Q15019 361 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 KCTD21Q4G0X4 260 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 EMC10Q5UCC4 262 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 RAVER1Q8IY67 606 aaKnown RBP3.9□□□□□ -1.78
COL8A1-205ENST00000463753 KCTD17Q8N5Z5 321 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 ENGASEQ8NFI3 743 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 CASP10Q92851 521 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 NMD3Q96D46 503 aaKnown RBP3.9□□□□□ -1.78
COL8A1-205ENST00000463753 ERLEC1Q96DZ1 483 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 MPP4Q96JB8 637 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 RPGRIP1Q96KN7 1286 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 PANX2Q96RD6 677 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 CCT7Q99832 543 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 CCDC68Q9H2F9 335 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 SMARCAL1Q9NZC9 954 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 STIM2Q9P246 746 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 TTF2Q9UNY4 1162 aaKnown RBP3.9□□□□□ -1.78
COL8A1-205ENST00000463753 CARD8Q9Y2G2 431 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 RBMX2Q9Y388 322 aaKnown RBP3.9□□□□□ -1.78
COL8A1-205ENST00000463753 A0A1B0GUL6 1792 aa3.9□□□□□ -1.78
COL8A1-205ENST00000463753 FAM170AA1A519 330 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 FZD9O00144 591 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 PDE2AO00408 941 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 ABLIM1O14639 778 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 FYB1O15117 783 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 UBOX5O94941 541 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 FAM153BP0C7A2 387 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 CD97P48960 835 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 INAQ16352 499 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 FAM153CQ494X1 144 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 GLE1Q53GS7 698 aaKnown RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 LRRC8BQ6P9F7 803 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 SLC4A10Q6U841 1118 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 CCDC116Q8IYX3 515 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 FMR1NBQ8N0W7 255 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 ARFGAP2Q8N6H7 521 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 MDM1Q8TC05 714 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 LZICQ8WZA0 190 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 PTPRN2Q92932 1015 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 UCN2Q96RP3 112 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 ELAC2Q9BQ52 826 aaKnown RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 API5Q9BZZ5 524 aaKnown RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 EURLQ9NYK6 297 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 CTNNAL1Q9UBT7 734 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 FAM153AQ9UHL3 310 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 MOSPD1Q9UJG1 213 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 CCNL1Q9UK58 526 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 NFU1Q9UMS0 254 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 SLC12A4Q9UP95 1085 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 PCDHB9Q9Y5E1 797 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 COL4A5P29400 1685 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 ABCC4O15439 1325 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 MAGEB6P1A0A0J9YX57 407 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 TTC24A2A3L6 582 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 CCDC160A6NGH7 325 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 HMGB1P1B2RPK0 211 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 GCOM1H8Y6P7 765 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 SART1O43290 800 aaKnown RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 CTNND1O60716 968 aaKnown RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 ATP9AO75110 1047 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 OXSR1O95747 527 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms