RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 ADCY7P51828 1080 aa16.43■□□□□ 0.22
SMC1A-204ENST00000463684 NLRP11P59045 1033 aaKnown RBP16.43■□□□□ 0.22
SMC1A-204ENST00000463684 WWC2Q6AWC2 1192 aa16.43■□□□□ 0.22
SMC1A-204ENST00000463684 PLA2G4DQ86XP0 818 aa16.43■□□□□ 0.22
SMC1A-204ENST00000463684 ZNF710Q8N1W2 664 aa16.43■□□□□ 0.22
SMC1A-204ENST00000463684 FLCNQ8NFG4 579 aa16.43■□□□□ 0.22
SMC1A-204ENST00000463684 MAP7D2Q96T17 732 aa16.43■□□□□ 0.22
SMC1A-204ENST00000463684 TCEAL9Q9UHQ7 104 aa16.43■□□□□ 0.22
SMC1A-204ENST00000463684 CEP131Q9UPN4 1083 aa16.43■□□□□ 0.22
SMC1A-204ENST00000463684 SMCO2A6NFE2 343 aa16.42■□□□□ 0.22
SMC1A-204ENST00000463684 IPO5O00410 1097 aaKnown RBP16.42■□□□□ 0.22
SMC1A-204ENST00000463684 EOMESO95936 686 aa16.42■□□□□ 0.22
SMC1A-204ENST00000463684 EIF4BP23588 611 aaKnown RBP16.42■□□□□ 0.22
SMC1A-204ENST00000463684 SREBF1P36956 1147 aa16.42■□□□□ 0.22
SMC1A-204ENST00000463684 METAP2P50579 478 aaKnown RBP eCLIP16.42■□□□□ 0.22
SMC1A-204ENST00000463684 AP3B2Q13367 1082 aa16.42■□□□□ 0.22
SMC1A-204ENST00000463684 KIAA1841Q6NSI8 718 aa16.42■□□□□ 0.22
SMC1A-204ENST00000463684 EFCAB12Q6NXP0 572 aa16.42■□□□□ 0.22
SMC1A-204ENST00000463684 PPP1R18Q6NYC8 613 aa16.42■□□□□ 0.22
SMC1A-204ENST00000463684 VPS52Q8N1B4 723 aa16.42■□□□□ 0.22
SMC1A-204ENST00000463684 C12orf76Q8N812 135 aaPredicted RBP16.42■□□□□ 0.22
SMC1A-204ENST00000463684 ACSF2Q96CM8 615 aaPredicted RBP16.42■□□□□ 0.22
SMC1A-204ENST00000463684 TMEM169Q96HH4 297 aa16.42■□□□□ 0.22
SMC1A-204ENST00000463684 MRPL9Q9BYD2 267 aaKnown RBP16.42■□□□□ 0.22
SMC1A-204ENST00000463684 GLT8D2Q9H1C3 349 aa16.42■□□□□ 0.22
SMC1A-204ENST00000463684 CYP26B1Q9NR63 512 aa16.42■□□□□ 0.22
SMC1A-204ENST00000463684 MAFBQ9Y5Q3 323 aaPredicted RBP16.42■□□□□ 0.22
SMC1A-204ENST00000463684 PLXNA3P51805 1871 aa16.42■□□□□ 0.22
SMC1A-204ENST00000463684 LOXHD1Q8IVV2 1947 aa16.41■□□□□ 0.22
SMC1A-204ENST00000463684 CACNA1HO95180 2353 aa16.41■□□□□ 0.22
SMC1A-204ENST00000463684 A0A0U1RQF3 1178 aa16.41■□□□□ 0.22
SMC1A-204ENST00000463684 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.41■□□□□ 0.22
SMC1A-204ENST00000463684 NT5C1B-RDH14C9J2C7 533 aa16.41■□□□□ 0.22
SMC1A-204ENST00000463684 DHX15O43143 795 aaKnown RBP16.41■□□□□ 0.22
SMC1A-204ENST00000463684 CLCN3P51790 818 aa16.41■□□□□ 0.22
SMC1A-204ENST00000463684 BCAR1P56945 870 aa16.41■□□□□ 0.22
SMC1A-204ENST00000463684 GIT2Q14161 759 aa16.41■□□□□ 0.22
SMC1A-204ENST00000463684 CLLU1OSQ5K130 101 aa16.41■□□□□ 0.22
SMC1A-204ENST00000463684 MICU3Q86XE3 530 aa16.41■□□□□ 0.22
SMC1A-204ENST00000463684 HELQQ8TDG4 1101 aa16.41■□□□□ 0.22
SMC1A-204ENST00000463684 ZNF577Q9BSK1 485 aa16.41■□□□□ 0.22
SMC1A-204ENST00000463684 TBC1D22BQ9NU19 505 aa16.41■□□□□ 0.22
SMC1A-204ENST00000463684 CARNS1A5YM72 827 aa16.4■□□□□ 0.22
SMC1A-204ENST00000463684 SPDYE4A6NLX3 237 aa16.4■□□□□ 0.22
SMC1A-204ENST00000463684 hCG_1984214I3L0E3 225 aa16.4■□□□□ 0.22
SMC1A-204ENST00000463684 PSAPP07602 524 aa16.4■□□□□ 0.22
SMC1A-204ENST00000463684 ZNF746Q6NUN9 644 aaPredicted RBP16.4■□□□□ 0.22
SMC1A-204ENST00000463684 KANK3Q6NY19 840 aa16.4■□□□□ 0.22
SMC1A-204ENST00000463684 CABP7Q86V35 215 aa16.4■□□□□ 0.22
SMC1A-204ENST00000463684 SMAP1Q8IYB5 467 aaPredicted RBP16.4■□□□□ 0.22
SMC1A-204ENST00000463684 ZNF713Q8N859 430 aaPredicted RBP16.4■□□□□ 0.22
SMC1A-204ENST00000463684 SCLT1Q96NL6 688 aa16.4■□□□□ 0.22
SMC1A-204ENST00000463684 ADAMTS10Q9H324 1103 aa16.4■□□□□ 0.22
SMC1A-204ENST00000463684 RBM28Q9NW13 759 aaKnown RBP16.4■□□□□ 0.22
SMC1A-204ENST00000463684 DACT1Q9NYF0 836 aa16.4■□□□□ 0.22
SMC1A-204ENST00000463684 PCDHA10Q9Y5I2 948 aa16.4■□□□□ 0.22
SMC1A-204ENST00000463684 V9GY48 417 aaPredicted RBP16.4■□□□□ 0.22
SMC1A-204ENST00000463684 PTPRZ1P23471 2315 aaPredicted RBP16.39■□□□□ 0.21
SMC1A-204ENST00000463684 FAM86B1E9PN63 330 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 FAM86B2P0C5J1 330 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 EPCAMP16422 314 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 AOC1P19801 751 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 POLGP54098 1239 aaPredicted RBP16.39■□□□□ 0.21
SMC1A-204ENST00000463684 TYW1BQ6NUM6 668 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 TMC5Q6UXY8 1006 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 OTOP3Q7RTS5 596 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 PPFIBP1Q86W92 1011 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 EXOC6Q8TAG9 804 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 FAM167AQ96KS9 214 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 RTP3Q9BQQ7 232 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 LRRC2Q9BYS8 371 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 ZBP1Q9H171 429 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 NRBP2Q9NSY0 501 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 GABBR1Q9UBS5 961 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 FBXL21Q9UKT6 434 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 SAMM50Q9Y512 469 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 IRAK3Q9Y616 596 aa16.39■□□□□ 0.21
SMC1A-204ENST00000463684 ZC3H11AO75152 810 aaKnown RBP eCLIP16.38■□□□□ 0.21
SMC1A-204ENST00000463684 CLK2P49760 499 aaKnown RBP16.38■□□□□ 0.21
SMC1A-204ENST00000463684 TDGQ13569 410 aa16.38■□□□□ 0.21
SMC1A-204ENST00000463684 ANGPT1Q15389 498 aa16.38■□□□□ 0.21
SMC1A-204ENST00000463684 DDX53Q86TM3 631 aaKnown RBP16.38■□□□□ 0.21
SMC1A-204ENST00000463684 ZNF598Q86UK7 904 aaKnown RBP16.38■□□□□ 0.21
SMC1A-204ENST00000463684 SGMS1Q86VZ5 419 aa16.38■□□□□ 0.21
SMC1A-204ENST00000463684 CCDC105Q8IYK2 499 aa16.38■□□□□ 0.21
SMC1A-204ENST00000463684 LRRC71Q8N4P6 559 aa16.38■□□□□ 0.21
SMC1A-204ENST00000463684 KCNG4Q8TDN1 519 aa16.38■□□□□ 0.21
SMC1A-204ENST00000463684 AUTS2Q8WXX7 1259 aa16.38■□□□□ 0.21
SMC1A-204ENST00000463684 RSPH1Q8WYR4 309 aa16.38■□□□□ 0.21
SMC1A-204ENST00000463684 ZNF668Q96K58 619 aaPredicted RBP16.38■□□□□ 0.21
SMC1A-204ENST00000463684 BARHL2Q9NY43 387 aa16.38■□□□□ 0.21
SMC1A-204ENST00000463684 CNTNAP5Q8WYK1 1306 aa16.38■□□□□ 0.21
SMC1A-204ENST00000463684 IGLV3-22A0A075B6J6 115 aa16.37■□□□□ 0.21
SMC1A-204ENST00000463684 STK25O00506 426 aa16.37■□□□□ 0.21
SMC1A-204ENST00000463684 PI15O43692 258 aa16.37■□□□□ 0.21
SMC1A-204ENST00000463684 CYP3A4P08684 503 aa16.37■□□□□ 0.21
SMC1A-204ENST00000463684 CTSAP10619 480 aa16.37■□□□□ 0.21
SMC1A-204ENST00000463684 DARSP14868 501 aaKnown RBP16.37■□□□□ 0.21
SMC1A-204ENST00000463684 GPC3P51654 580 aa16.37■□□□□ 0.21
SMC1A-204ENST00000463684 SETQ01105 290 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms