RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 GH1P01241 217 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 CTSHP09668 335 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 CYP27A1Q02318 531 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 KSR1Q8IVT5 923 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 C10orf67Q8IYJ2 551 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 ANKRD13AQ8IZ07 590 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 MTIF3Q9H2K0 278 aaKnown RBP13.78□□□□□ -0.2
NUP58-206ENST00000463407 CLGNO14967 610 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 CSF1RP07333 972 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 ORC2Q13416 577 aaPredicted RBP13.78□□□□□ -0.2
NUP58-206ENST00000463407 CCDC170Q8IYT3 715 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 ARHGAP24Q8N264 748 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 KIF12Q96FN5 646 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 HOMER3Q9NSC5 361 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 FAM217BQ9NTX9 383 aaPredicted RBP13.78□□□□□ -0.2
NUP58-206ENST00000463407 CPS1P31327 1500 aa13.78□□□□□ -0.2
NUP58-206ENST00000463407 NDUFB10O96000 172 aa13.77□□□□□ -0.2
NUP58-206ENST00000463407 NFKBIAP25963 317 aa13.77□□□□□ -0.2
NUP58-206ENST00000463407 C2orf54Q08AI8 447 aa13.77□□□□□ -0.2
NUP58-206ENST00000463407 TMEM270Q6UE05 265 aa13.77□□□□□ -0.2
NUP58-206ENST00000463407 MTFR1LQ9H019 292 aa13.77□□□□□ -0.2
NUP58-206ENST00000463407 ZNF500O60304 480 aaPredicted RBP13.77□□□□□ -0.2
NUP58-206ENST00000463407 GGPS1O95749 300 aa13.77□□□□□ -0.2
NUP58-206ENST00000463407 YWHABP31946 246 aaKnown RBP13.77□□□□□ -0.2
NUP58-206ENST00000463407 INPP5BP32019 993 aa13.77□□□□□ -0.2
NUP58-206ENST00000463407 IQCB1Q15051 598 aa13.77□□□□□ -0.2
NUP58-206ENST00000463407 AGBL3Q8NEM8 1001 aa13.77□□□□□ -0.2
NUP58-206ENST00000463407 SUCLA2Q9P2R7 463 aaPredicted RBP13.77□□□□□ -0.2
NUP58-206ENST00000463407 CDC23Q9UJX2 597 aa13.77□□□□□ -0.2
NUP58-206ENST00000463407 GOLPH3LQ9H4A5 285 aa13.77□□□□□ -0.21
NUP58-206ENST00000463407 SCINQ9Y6U3 715 aa13.77□□□□□ -0.21
NUP58-206ENST00000463407 CASP1P29466 404 aa13.77□□□□□ -0.21
NUP58-206ENST00000463407 SAAL1Q96ER3 474 aa13.77□□□□□ -0.21
NUP58-206ENST00000463407 FAM114A2Q9NRY5 505 aa13.77□□□□□ -0.21
NUP58-206ENST00000463407 UPP2O95045 317 aa13.77□□□□□ -0.21
NUP58-206ENST00000463407 ECEL1O95672 775 aa13.77□□□□□ -0.21
NUP58-206ENST00000463407 RARBP10826 455 aa13.77□□□□□ -0.21
NUP58-206ENST00000463407 ADORA2BP29275 332 aa13.77□□□□□ -0.21
NUP58-206ENST00000463407 CLEC10AQ8IUN9 316 aa13.77□□□□□ -0.21
NUP58-206ENST00000463407 RNF149Q8NC42 400 aa13.77□□□□□ -0.21
NUP58-206ENST00000463407 HPCAL4Q9UM19 191 aa13.77□□□□□ -0.21
NUP58-206ENST00000463407 CXCR5P32302 372 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 TRIM49BA6NDI0 452 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 PGRMC1O00264 195 aaKnown RBP13.76□□□□□ -0.21
NUP58-206ENST00000463407 HIP1RO75146 1068 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 TFRCP02786 760 aaKnown RBP13.76□□□□□ -0.21
NUP58-206ENST00000463407 VAMP7P51809 220 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 FCGRTP55899 365 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 GNGT1P63211 74 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 EPHA7Q15375 998 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 YAF2Q8IY57 180 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 SRBD1Q8N5C6 995 aaKnown RBP13.76□□□□□ -0.21
NUP58-206ENST00000463407 M0QYV0 167 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 CTNND1O60716 968 aaKnown RBP13.76□□□□□ -0.21
NUP58-206ENST00000463407 ZNF543Q08ER8 600 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 RPUSD2Q8IZ73 545 aaKnown RBP13.76□□□□□ -0.21
NUP58-206ENST00000463407 CFAP36Q96G28 342 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 NUDT12Q9BQG2 462 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 NYAP2Q9P242 653 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 SLC25A27O95847 323 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 SOX5P35711 763 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 ATP1A2P50993 1020 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 KNOP1Q1ED39 458 aaKnown RBP13.76□□□□□ -0.21
NUP58-206ENST00000463407 CEP55Q53EZ4 464 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 PPP6R3Q5H9R7 873 aaPredicted RBP13.76□□□□□ -0.21
NUP58-206ENST00000463407 INTS5Q6P9B9 1019 aaKnown RBP13.76□□□□□ -0.21
NUP58-206ENST00000463407 LRRC31Q6UY01 552 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 CACNA2D3Q8IZS8 1091 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 UBE2Q2LH0YL09 131 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 ACAP3Q96P50 834 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 VCPKMTQ9H867 229 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 FRMPD1Q5SYB0 1578 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 AGLP35573 1532 aa13.76□□□□□ -0.21
NUP58-206ENST00000463407 ZBED1O96006 694 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 GTF2A2P52657 109 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 TRIP13Q15645 432 aaPredicted RBP13.75□□□□□ -0.21
NUP58-206ENST00000463407 C16orf86Q6ZW13 317 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 PBKQ96KB5 322 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 PANX2Q96RD6 677 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 SMARCAD1Q9H4L7 1026 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 EFCC1Q9HA90 598 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 RBBP5Q15291 538 aaKnown RBP13.75□□□□□ -0.21
NUP58-206ENST00000463407 BZW1Q7L1Q6 419 aaKnown RBP13.75□□□□□ -0.21
NUP58-206ENST00000463407 ADAM22Q9P0K1 906 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 DAAM1Q9Y4D1 1078 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 UBE4BO95155 1302 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 ADAMTS13Q76LX8 1427 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 PRR29P0C7W0 189 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 TGFB2P61812 414 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 KYAT1Q16773 422 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 SBK1Q52WX2 424 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 GPD1LQ8N335 351 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 F8W8V4 182 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 NDUFA10O95299 355 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 PMLP29590 882 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 ITSN1Q15811 1721 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 A8MXQ7 604 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 PRKCBP05771 671 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 NNMTP40261 264 aa13.75□□□□□ -0.21
NUP58-206ENST00000463407 VEPH1Q14D04 833 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms