RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 CBWD5Q5RIA9 395 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 KLHDC7AQ5VTJ3 777 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 STXBP4Q6ZWJ1 553 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 HAUS6Q7Z4H7 955 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 SMAP1Q8IYB5 467 aaPredicted RBP14.03□□□□□ -0.16
VAPB-203ENST00000463370 FAM133AQ8N9E0 248 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 RDM1Q8NG50 284 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 CEP170P1Q96L14 293 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 EPC1Q9H2F5 836 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 KCNH4Q9UQ05 1017 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 CTAGE9A4FU28 777 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 ENC1O14682 589 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 PGK2P07205 417 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 PRKCEQ02156 737 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 PPP2R3AQ06190 1150 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 TDRD12Q587J7 1177 aaKnown RBP14.03□□□□□ -0.16
VAPB-203ENST00000463370 SFMBT2Q5VUG0 894 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 DNERQ8NFT8 737 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 IWS1Q96ST2 819 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 ARID3AQ99856 593 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 DEF6Q9H4E7 631 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 GCNT4Q9P109 453 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 PCDHA13Q9Y5I0 950 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 PFASO15067 1338 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 MACROD2A1Z1Q3 448 aa14.02□□□□□ -0.16
VAPB-203ENST00000463370 CXCL11O14625 94 aa14.02□□□□□ -0.16
VAPB-203ENST00000463370 AKR1B10O60218 316 aa14.02□□□□□ -0.16
VAPB-203ENST00000463370 EXOC3O60645 756 aa14.02□□□□□ -0.16
VAPB-203ENST00000463370 EIF3JO75822 258 aaKnown RBP14.02□□□□□ -0.16
VAPB-203ENST00000463370 LCA5LO95447 670 aa14.02□□□□□ -0.16
VAPB-203ENST00000463370 PSAPP07602 524 aa14.02□□□□□ -0.16
VAPB-203ENST00000463370 PNMA6AP0CW24 399 aaPredicted RBP14.02□□□□□ -0.16
VAPB-203ENST00000463370 ATP4AP20648 1035 aa14.02□□□□□ -0.16
VAPB-203ENST00000463370 VAV2P52735 878 aa14.02□□□□□ -0.16
VAPB-203ENST00000463370 DLG4P78352 724 aa14.02□□□□□ -0.16
VAPB-203ENST00000463370 GTF2BQ00403 316 aa14.02□□□□□ -0.16
VAPB-203ENST00000463370 EEPD1Q7L9B9 569 aa14.02□□□□□ -0.16
VAPB-203ENST00000463370 ZC3H15Q8WU90 426 aaKnown RBP14.02□□□□□ -0.16
VAPB-203ENST00000463370 CDHR1Q96JP9 859 aa14.02□□□□□ -0.16
VAPB-203ENST00000463370 DRC1Q96MC2 740 aa14.02□□□□□ -0.16
VAPB-203ENST00000463370 IFIH1Q9BYX4 1025 aaKnown RBP14.02□□□□□ -0.16
VAPB-203ENST00000463370 RBPJLQ9UBG7 517 aa14.02□□□□□ -0.16
VAPB-203ENST00000463370 HDAC6Q9UBN7 1215 aa14.02□□□□□ -0.16
VAPB-203ENST00000463370 AGTPBP1Q9UPW5 1226 aa14.02□□□□□ -0.16
VAPB-203ENST00000463370 LOC285556D6RIA3 1793 aa14.02□□□□□ -0.17
VAPB-203ENST00000463370 POTEB2H3BUK9 544 aa14.02□□□□□ -0.17
VAPB-203ENST00000463370 STAM2O75886 525 aa14.02□□□□□ -0.17
VAPB-203ENST00000463370 IPO7O95373 1038 aaKnown RBP14.02□□□□□ -0.17
VAPB-203ENST00000463370 MAPTP10636 758 aaKnown RBP14.02□□□□□ -0.17
VAPB-203ENST00000463370 NF2P35240 595 aa14.02□□□□□ -0.17
VAPB-203ENST00000463370 NPTX2P47972 431 aa14.02□□□□□ -0.17
VAPB-203ENST00000463370 NCKAP1LP55160 1127 aa14.02□□□□□ -0.17
VAPB-203ENST00000463370 SPA17Q15506 151 aa14.02□□□□□ -0.17
VAPB-203ENST00000463370 ZNF662Q6ZS27 426 aa14.02□□□□□ -0.17
VAPB-203ENST00000463370 MNS1Q8NEH6 495 aa14.02□□□□□ -0.17
VAPB-203ENST00000463370 NAPGQ99747 312 aaPredicted RBP14.02□□□□□ -0.17
VAPB-203ENST00000463370 MKNK1Q9BUB5 465 aa14.02□□□□□ -0.17
VAPB-203ENST00000463370 TAF1DQ9H5J8 278 aaPredicted RBP14.02□□□□□ -0.17
VAPB-203ENST00000463370 PLCB1Q9NQ66 1216 aa14.02□□□□□ -0.17
VAPB-203ENST00000463370 XPNPEP1Q9NQW7 623 aa14.02□□□□□ -0.17
VAPB-203ENST00000463370 SEPT9Q9UHD8 586 aaPredicted RBP14.02□□□□□ -0.17
VAPB-203ENST00000463370 FRMD4BQ9Y2L6 1034 aa14.02□□□□□ -0.17
VAPB-203ENST00000463370 A0A0G2JMZ2 1700 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 GLTPD2A6NH11 291 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 CCDC169A6NNP5 214 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 UBA1P22314 1058 aaKnown RBP14.01□□□□□ -0.17
VAPB-203ENST00000463370 PPIL2Q13356 520 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 GPAT2Q6NUI2 795 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 SLC9A9Q8IVB4 645 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 TMEM161BQ8NDZ6 487 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 SYN2Q92777 582 aaPredicted RBP14.01□□□□□ -0.17
VAPB-203ENST00000463370 ATP6V0A1Q93050 837 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 ACCSQ96QU6 501 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 MLXIPQ9HAP2 919 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 MYO1AQ9UBC5 1043 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 SALL4Q9UJQ4 1053 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 ADGRA3Q8IWK6 1321 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 SYNGAP1Q96PV0 1343 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 ANKRD63C9JTQ0 380 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 KRT86O43790 486 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 LRRN2O75325 713 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 ATP1A1P05023 1023 aaKnown RBP14.01□□□□□ -0.17
VAPB-203ENST00000463370 SERPING1P05155 500 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 SUPT20HL2P0C7V6 817 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 EDNRBP24530 442 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 ICAM3P32942 547 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 FMO5P49326 533 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 AMPD2Q01433 879 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 SLC9C1Q4G0N8 1177 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 GBP6Q6ZN66 633 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 PDCL2Q8N4E4 241 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 ANKRD13CQ8N6S4 541 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 FGD4Q96M96 766 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 PDLIM7Q9NR12 457 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 CYP26B1Q9NR63 512 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 AIPL1Q9NZN9 384 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 FBXO40Q9UH90 709 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 CDC23Q9UJX2 597 aa14.01□□□□□ -0.17
VAPB-203ENST00000463370 SSU72P8A0A1W2PR75 194 aa14□□□□□ -0.17
VAPB-203ENST00000463370 ADSSP30520 456 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms