RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 HPS3Q969F9 1004 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 TMEM143Q96AN5 459 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 DRC1Q96MC2 740 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 CTAGE1Q96RT6 745 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 STRA6Q9BX79 667 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 C17orf75Q9HAS0 396 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 PARVGQ9HBI0 331 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 RMND1Q9NWS8 449 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 GTF2IRD1Q9UHL9 959 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 A0A1W2PQ45 241 aaPredicted RBP15.88■□□□□ 0.13
COL6A1-202ENST00000463060 A0A1W2PQY0 241 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 PLS3P13797 630 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 CAPN2P17655 700 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 CDK7P50613 346 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 IGBP1P78318 339 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 ZNF200P98182 395 aaPredicted RBP15.88■□□□□ 0.13
COL6A1-202ENST00000463060 PTPN11Q06124 597 aaPredicted RBP15.88■□□□□ 0.13
COL6A1-202ENST00000463060 ITGA7Q13683 1181 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 HERC4Q5GLZ8 1057 aaPredicted RBP15.88■□□□□ 0.13
COL6A1-202ENST00000463060 FAM102BQ5T8I3 360 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 EFCAB12Q6NXP0 572 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 SASS6Q6UVJ0 657 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 LRSAM1Q6UWE0 723 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 MAEAQ7L5Y9 396 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 EPM2AIP1Q7L775 607 aaPredicted RBP15.88■□□□□ 0.13
COL6A1-202ENST00000463060 SFR1Q86XK3 245 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 KIAA0319LQ8IZA0 1049 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 LRRC71Q8N4P6 559 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 C7orf31Q8N865 590 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 KIAA0895Q8NCT3 520 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 SPIRE2Q8WWL2 714 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 PRPF31Q8WWY3 499 aaKnown RBP15.88■□□□□ 0.13
COL6A1-202ENST00000463060 ANP32EQ9BTT0 268 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 FGFBP2Q9BYJ0 223 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 GTPBP4Q9BZE4 634 aaKnown RBP15.88■□□□□ 0.13
COL6A1-202ENST00000463060 EXOC1Q9NV70 894 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 EVPLQ92817 2033 aa15.88■□□□□ 0.13
COL6A1-202ENST00000463060 TRIP12Q14669 1992 aaPredicted RBP15.87■□□□□ 0.13
COL6A1-202ENST00000463060 SMIM35A0A1B0GVV1 85 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 C17orf102A2RUQ5 167 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 PPP1R3GB7ZBB8 358 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 KBTBD13C9JR72 458 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 TREHO43280 583 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 TBCAO75347 108 aaKnown RBP15.87■□□□□ 0.13
COL6A1-202ENST00000463060 FAM13AO94988 1023 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
COL6A1-202ENST00000463060 MAPTP10636 758 aaKnown RBP15.87■□□□□ 0.13
COL6A1-202ENST00000463060 GLRA2P23416 452 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 FAM26FQ5R3K3 315 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 GDF6Q6KF10 455 aaPredicted RBP15.87■□□□□ 0.13
COL6A1-202ENST00000463060 ZNF720Q7Z2F6 126 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 MYCT1Q8N699 235 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 MLKLQ8NB16 471 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 RETREG2Q8NC44 543 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 GLIS3Q8NEA6 775 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 ASAP3Q8TDY4 903 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 TCP11Q8WWU5 503 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 GLT1D1Q96MS3 346 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 POLR3FQ9H1D9 316 aaPredicted RBP15.87■□□□□ 0.13
COL6A1-202ENST00000463060 ST6GALNAC4Q9H4F1 302 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 LARSQ9P2J5 1176 aaKnown RBP15.87■□□□□ 0.13
COL6A1-202ENST00000463060 GDAQ9Y2T3 454 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 MYH11P35749 1972 aa15.87■□□□□ 0.13
COL6A1-202ENST00000463060 PPP1R37O75864 691 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 TFRCP02786 760 aaKnown RBP15.86■□□□□ 0.13
COL6A1-202ENST00000463060 CCDC192P0DO97 292 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 GNAT1P11488 350 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 COL6A1P12109 1028 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 CD44P16070 742 aaKnown RBP15.86■□□□□ 0.13
COL6A1-202ENST00000463060 PRCPP42785 496 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 NPTX2P47972 431 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 CLCN3P51790 818 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 CASP5P51878 434 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 NCKAP1LP55160 1127 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 POU5F1BQ06416 359 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 DPCR1Q3MIW9 517 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 ODR4Q5SWX8 454 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 ADSSL1Q8N142 457 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 ANKLE1Q8NAG6 615 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 CCDC47Q96A33 483 aaKnown RBP15.86■□□□□ 0.13
COL6A1-202ENST00000463060 MED15Q96RN5 788 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 SEZ6LQ9BYH1 1024 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 SUGCTQ9HAC7 445 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 SLC39A2Q9NP94 309 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 ANO10Q9NW15 660 aa15.86■□□□□ 0.13
COL6A1-202ENST00000463060 SUCLA2Q9P2R7 463 aaPredicted RBP15.86■□□□□ 0.13
COL6A1-202ENST00000463060 ASAP2O43150 1006 aa15.85■□□□□ 0.13
COL6A1-202ENST00000463060 NMT1P30419 496 aaKnown RBP15.85■□□□□ 0.13
COL6A1-202ENST00000463060 HOXD13P35453 343 aa15.85■□□□□ 0.13
COL6A1-202ENST00000463060 NAMPTP43490 491 aa15.85■□□□□ 0.13
COL6A1-202ENST00000463060 DNM2P50570 870 aa15.85■□□□□ 0.13
COL6A1-202ENST00000463060 PEX3P56589 373 aa15.85■□□□□ 0.13
COL6A1-202ENST00000463060 CHMP4BP1P59074 171 aa15.85■□□□□ 0.13
COL6A1-202ENST00000463060 LAMTOR4Q0VGL1 99 aa15.85■□□□□ 0.13
COL6A1-202ENST00000463060 MXD4Q14582 209 aaPredicted RBP15.85■□□□□ 0.13
COL6A1-202ENST00000463060 STX1AQ16623 288 aa15.85■□□□□ 0.13
COL6A1-202ENST00000463060 CT47A1Q5JQC4 288 aaPredicted RBP15.85■□□□□ 0.13
COL6A1-202ENST00000463060 RUFY4Q6ZNE9 571 aa15.85■□□□□ 0.13
COL6A1-202ENST00000463060 RPAINQ86UA6 219 aa15.85■□□□□ 0.13
COL6A1-202ENST00000463060 SERINC5Q86VE9 423 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms