RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 MARCKSP29966 332 aaPredicted RBP10.64□□□□□ -0.71
PKP4-208ENST00000462335 PHKA2P46019 1235 aa10.64□□□□□ -0.71
PKP4-208ENST00000462335 TARBP2Q15633 366 aaKnown RBP10.64□□□□□ -0.71
PKP4-208ENST00000462335 ATL3Q6DD88 541 aa10.64□□□□□ -0.71
PKP4-208ENST00000462335 FAM173BQ6P4H8 233 aa10.64□□□□□ -0.71
PKP4-208ENST00000462335 PADI6Q6TGC4 694 aa10.64□□□□□ -0.71
PKP4-208ENST00000462335 CATSPER4Q7RTX7 472 aa10.64□□□□□ -0.71
PKP4-208ENST00000462335 IGSF22Q8N9C0 903 aa10.64□□□□□ -0.71
PKP4-208ENST00000462335 PRPF31Q8WWY3 499 aaKnown RBP10.64□□□□□ -0.71
PKP4-208ENST00000462335 TIFAQ96CG3 184 aa10.64□□□□□ -0.71
PKP4-208ENST00000462335 YME1L1Q96TA2 773 aa10.64□□□□□ -0.71
PKP4-208ENST00000462335 PLIN2Q99541 437 aa10.64□□□□□ -0.71
PKP4-208ENST00000462335 BHMT2Q9H2M3 363 aa10.64□□□□□ -0.71
PKP4-208ENST00000462335 CXXC1Q9P0U4 656 aaPredicted RBP10.64□□□□□ -0.71
PKP4-208ENST00000462335 PADI3Q9ULW8 664 aa10.64□□□□□ -0.71
PKP4-208ENST00000462335 ST3GAL5Q9UNP4 418 aa10.64□□□□□ -0.71
PKP4-208ENST00000462335 PCDHB7Q9Y5E2 793 aa10.64□□□□□ -0.71
PKP4-208ENST00000462335 COL4A3BPQ9Y5P4 624 aa10.64□□□□□ -0.71
PKP4-208ENST00000462335 CLIC4Q9Y696 253 aa10.64□□□□□ -0.71
PKP4-208ENST00000462335 TRIOBPQ9H2D6 2365 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 SLC26A4O43511 780 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 ERLIN2O94905 339 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 F13A1P00488 732 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 SPATA31C1P0DKV0 1188 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 CDC25AP30304 524 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 RARRES1P49788 294 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 GPC3P51654 580 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 WDR5P61964 334 aaKnown RBP10.63□□□□□ -0.71
PKP4-208ENST00000462335 MGAT3Q09327 533 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 LAMTOR4Q0VGL1 99 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 DHX8Q14562 1220 aaKnown RBP10.63□□□□□ -0.71
PKP4-208ENST00000462335 PPP2R5AQ15172 486 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 ZNF410Q86VK4 478 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 HERC6Q8IVU3 1022 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 ZBTB8OSQ8IWT0 167 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 KCTD17Q8N5Z5 321 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 KRI1Q8N9T8 703 aaKnown RBP10.63□□□□□ -0.71
PKP4-208ENST00000462335 RNF149Q8NC42 400 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 DHX33Q9H6R0 707 aaKnown RBP10.63□□□□□ -0.71
PKP4-208ENST00000462335 DACT1Q9NYF0 836 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 WRAP73Q9P2S5 460 aaPredicted RBP10.63□□□□□ -0.71
PKP4-208ENST00000462335 KCNG1Q9UIX4 513 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 NOC2LQ9Y3T9 749 aaKnown RBP10.63□□□□□ -0.71
PKP4-208ENST00000462335 INSL6Q9Y581 213 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 PCDHA11Q9Y5I1 949 aa10.63□□□□□ -0.71
PKP4-208ENST00000462335 A0A087WZ62 844 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 LRRIQ4A6NIV6 560 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 PP2D1A8MPX8 630 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 GRXCR1A8MXD5 290 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 ENPP3O14638 875 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 SPTLC2O15270 562 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 STBD1O95210 358 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 EYA4O95677 639 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 LIG1P18858 919 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 ME1P48163 572 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 RABGGTBP53611 331 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 NUCB2P80303 420 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 MBTPS1Q14703 1052 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 SPOUT1Q5T280 376 aaKnown RBP10.62□□□□□ -0.71
PKP4-208ENST00000462335 RRAGBQ5VZM2 374 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 TWF2Q6IBS0 349 aaKnown RBP10.62□□□□□ -0.71
PKP4-208ENST00000462335 SRGAP1Q7Z6B7 1085 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 KSR1Q8IVT5 923 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 ABI1Q8IZP0 508 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 ZNF579Q8NAF0 562 aaKnown RBP10.62□□□□□ -0.71
PKP4-208ENST00000462335 RNF169Q8NCN4 708 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 DEPTORQ8TB45 409 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 KCNG4Q8TDN1 519 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 KIFAP3Q92845 792 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 LRCH3Q96II8 777 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 RAD9AQ99638 391 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 ADAM2Q99965 735 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 FDXACB1Q9BRP7 624 aaPredicted RBP10.62□□□□□ -0.71
PKP4-208ENST00000462335 POLR3FQ9H1D9 316 aaPredicted RBP10.62□□□□□ -0.71
PKP4-208ENST00000462335 AGO3Q9H9G7 860 aaKnown RBP10.62□□□□□ -0.71
PKP4-208ENST00000462335 CDHR5Q9HBB8 845 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 C1orf112Q9NSG2 853 aa10.62□□□□□ -0.71
PKP4-208ENST00000462335 SRPRBQ9Y5M8 271 aaKnown RBP10.62□□□□□ -0.71
PKP4-208ENST00000462335 TANC1Q9C0D5 1861 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 IGKV6-21A0A0C4DH24 114 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 GOLGA6L4A6NEF3 574 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 CCDC169A6NNP5 214 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 INO80B-WBP1J3KQ70 363 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 GPR32O75388 356 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 SKIP12755 728 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 DARSP14868 501 aaKnown RBP10.61□□□□□ -0.71
PKP4-208ENST00000462335 CYP11B2P19099 503 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 DNAJB2P25686 324 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 FXR1P51114 621 aaKnown RBP eCLIP10.61□□□□□ -0.71
PKP4-208ENST00000462335 SMTNP53814 917 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 KRT85P78386 507 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 DRP2Q13474 957 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 SLC39A14Q15043 492 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 IL17AQ16552 155 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 PPP2R2DQ66LE6 453 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 GPR153Q6NV75 609 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 TRAF7Q6Q0C0 670 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.61□□□□□ -0.715e-10■■■■■ 39.7
PKP4-208ENST00000462335 CCDC73Q6ZRK6 1079 aa10.61□□□□□ -0.71
PKP4-208ENST00000462335 HACE1Q8IYU2 909 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms