RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CPA6Q8N4T0 437 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 MAGEB6Q8N7X4 407 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 AUTS2Q8WXX7 1259 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 RTF1Q92541 710 aaKnown RBP3.99□□□□□ -1.77
HDAC6-212ENST00000461608 AIFM3Q96NN9 605 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 RHOBTB2Q9BYZ6 727 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 CSRNP2Q9H175 543 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 DLL4Q9NR61 685 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 BTBD7Q9P203 1132 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 KLHL14Q9P2G3 628 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 MBD1Q9UIS9 605 aaPredicted RBP3.99□□□□□ -1.77
HDAC6-212ENST00000461608 CNOT11Q9UKZ1 510 aaKnown RBP3.99□□□□□ -1.77
HDAC6-212ENST00000461608 SIT1Q9Y3P8 196 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 CCDC194A0A1B0GVG4 234 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 ZNF839A8K0R7 811 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 ACOT7O00154 380 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 XPOTO43592 962 aaKnown RBP3.98□□□□□ -1.77
HDAC6-212ENST00000461608 AKAP8O43823 692 aaKnown RBP3.98□□□□□ -1.77
HDAC6-212ENST00000461608 PLIN1O60240 522 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 NRP2O60462 931 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 CYP2C8P10632 490 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 PFKLP17858 780 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 ATF3P18847 181 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 GPR3P46089 330 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 SCAND1P57086 179 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 SRSF3P84103 164 aaKnown RBP3.98□□□□□ -1.77
HDAC6-212ENST00000461608 PRR5P85299 388 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 GRIN1Q05586 938 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 ADCY2Q08462 1091 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 MOGSQ13724 837 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 GTF2H3Q13889 308 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 SPIDRQ14159 915 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 UGT8Q16880 541 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 VMACQ2NL98 169 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 EFCAB2Q5VUJ9 269 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 PRAMEF9Q5VWM5 478 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 PGM2L1Q6PCE3 622 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 TMC6Q7Z403 805 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 WDR48Q8TAF3 677 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 IGDCC4Q8TDY8 1250 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 JPH3Q8WXH2 748 aaPredicted RBP3.98□□□□□ -1.77
HDAC6-212ENST00000461608 FOXRED1Q96CU9 486 aaPredicted RBP3.98□□□□□ -1.77
HDAC6-212ENST00000461608 TUBGCP5Q96RT8 1024 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 RTFDC1Q9BY42 306 aaPredicted RBP3.98□□□□□ -1.77
HDAC6-212ENST00000461608 VTA1Q9NP79 307 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 INCENPQ9NQS7 918 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 PRDM11Q9NQV5 511 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 FBXO10Q9UK96 956 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 NUMBLQ9Y6R0 609 aa3.98□□□□□ -1.77
HDAC6-212ENST00000461608 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.97□□□□□ -1.77
HDAC6-212ENST00000461608 DTNBO60941 627 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 PRPF6O94906 941 aaKnown RBP3.97□□□□□ -1.77
HDAC6-212ENST00000461608 FSHBP01225 129 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 LRG1P02750 347 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 CHGBP05060 677 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 AGXTP21549 392 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 AKAP5P24588 427 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 VIPR1P32241 457 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 MTNR1BP49286 362 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 SLC16A1P53985 500 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 ADKP55263 362 aaKnown RBP3.97□□□□□ -1.77
HDAC6-212ENST00000461608 CACNB2Q08289 660 aaPredicted RBP3.97□□□□□ -1.77
HDAC6-212ENST00000461608 NFATC3Q12968 1075 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 MLC1Q15049 377 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 PDCD1Q15116 288 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 CLUL1Q15846 466 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 MINDY4Q4G0A6 757 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 UBXN11Q5T124 520 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 CNKSR3Q6P9H4 555 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 DPP8Q6V1X1 898 aaPredicted RBP3.97□□□□□ -1.77
HDAC6-212ENST00000461608 CXXC5Q7LFL8 322 aaKnown RBP3.97□□□□□ -1.77
HDAC6-212ENST00000461608 KANSL1Q7Z3B3 1105 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 RAVER1Q8IY67 606 aaKnown RBP3.97□□□□□ -1.77
HDAC6-212ENST00000461608 CMTR2Q8IYT2 770 aaKnown RBP3.97□□□□□ -1.77
HDAC6-212ENST00000461608 CDYL2Q8N8U2 506 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.97□□□□□ -1.77
HDAC6-212ENST00000461608 HSPBAP1Q96EW2 488 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 BTBD2Q9BX70 525 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 PITHD1Q9GZP4 211 aaPredicted RBP3.97□□□□□ -1.77
HDAC6-212ENST00000461608 CNTD2Q9H8S5 307 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 NMRK2Q9NPI5 230 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 ZNF277Q9NRM2 450 aaPredicted RBP3.97□□□□□ -1.77
HDAC6-212ENST00000461608 USP40Q9NVE5 1235 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 DNAJC28Q9NX36 388 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 GALNT8Q9NY28 637 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 IP6K2Q9UHH9 426 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 WASF3Q9UPY6 502 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 PPP2R3BQ9Y5P8 575 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 GPR45Q9Y5Y3 372 aa3.97□□□□□ -1.77
HDAC6-212ENST00000461608 PRAMEF22A3QJZ6 481 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 IL33O95760 270 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 PFKMP08237 780 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 PF4V1P10720 104 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 HSPA6P17066 643 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 FBLN1P23142 703 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 APEX1P27695 318 aaKnown RBP3.96□□□□□ -1.78
HDAC6-212ENST00000461608 GNALP38405 381 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 GDF5P43026 501 aa3.96□□□□□ -1.78
HDAC6-212ENST00000461608 ZNF200P98182 395 aaPredicted RBP3.96□□□□□ -1.78
HDAC6-212ENST00000461608 SLC6A3Q01959 620 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms