RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 RGS3P49796 1198 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 CCT2P78371 535 aaKnown RBP4.07□□□□□ -1.76
VCL-203ENST00000461383 CDK17Q00537 523 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 PFKPQ01813 784 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 KIF23Q02241 960 aaPredicted RBP4.07□□□□□ -1.76
VCL-203ENST00000461383 PPARAQ07869 468 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 OS9Q13438 667 aaPredicted RBP4.07□□□□□ -1.76
VCL-203ENST00000461383 MYBPC3Q14896 1274 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 BRD3Q15059 726 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 UAP1L1Q3KQV9 507 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 MAP9Q49MG5 647 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 PITRM1Q5JRX3 1037 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 RRP12Q5JTH9 1297 aaKnown RBP4.07□□□□□ -1.76
VCL-203ENST00000461383 FYB2Q5VWT5 728 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 MBNL2Q5VZF2 373 aaKnown RBP4.07□□□□□ -1.76
VCL-203ENST00000461383 TMEM132EQ6IEE7 984 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 ZNF605Q86T29 641 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 DGKHQ86XP1 1220 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 MIB1Q86YT6 1006 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 C1QL4Q86Z23 238 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 IRF2BP1Q8IU81 584 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 IGDCC4Q8TDY8 1250 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 AIFM3Q96NN9 605 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 SLC2A13Q96QE2 648 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 ACE2Q9BYF1 805 aaPredicted RBP4.07□□□□□ -1.76
VCL-203ENST00000461383 GALNT8Q9NY28 637 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 OBP2AQ9NY56 170 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 BTBD7Q9P203 1132 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 NUMBLQ9Y6R0 609 aa4.07□□□□□ -1.76
VCL-203ENST00000461383 MYPNQ86TC9 1320 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 ZNF839A8K0R7 811 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 NFIBO00712 420 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 AP1G1O43747 822 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 NBPF7P0C2Y1 421 aaPredicted RBP4.06□□□□□ -1.76
VCL-203ENST00000461383 CYP2C8P10632 490 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 NCAM1P13591 858 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 C5AR1P21730 350 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 AKAP5P24588 427 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 APEX1P27695 318 aaKnown RBP4.06□□□□□ -1.76
VCL-203ENST00000461383 ECE1P42892 770 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 GLRBP48167 497 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 MTNR1BP49286 362 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 ADKP55263 362 aaKnown RBP4.06□□□□□ -1.76
VCL-203ENST00000461383 NOLC1Q14978 699 aaKnown RBP eCLIP4.06□□□□□ -1.76
VCL-203ENST00000461383 SKIDA1Q1XH10 827 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 UNQ6494/PRO21346Q6UXR6 183 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 FAM26EQ8N5C1 309 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 OR14C36Q8NHC7 312 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 HIST1H2AHQ96KK5 128 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 TOX2Q96NM4 488 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 HIST1H2AJQ99878 128 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 NOL10Q9BSC4 688 aaKnown RBP4.06□□□□□ -1.76
VCL-203ENST00000461383 MTG2Q9H4K7 406 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 IFT122Q9HBG6 1241 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 ARNT2Q9HBZ2 717 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 DLL4Q9NR61 685 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 SIRT5Q9NXA8 310 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 ARHGAP20Q9P2F6 1191 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 RBPJLQ9UBG7 517 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 RAPGEFL1Q9UHV5 662 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 SYNPO2Q9UMS6 1093 aa4.06□□□□□ -1.76
VCL-203ENST00000461383 FRMPD2Q68DX3 1309 aaPredicted RBP4.05□□□□□ -1.76
VCL-203ENST00000461383 CTNND1O60716 968 aaKnown RBP4.05□□□□□ -1.76
VCL-203ENST00000461383 ZRANB2O95218 330 aaKnown RBP eCLIP4.05□□□□□ -1.76
VCL-203ENST00000461383 KRT1P04264 644 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 ASGR2P07307 311 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 PFKLP17858 780 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 LPOP22079 712 aaPredicted RBP4.05□□□□□ -1.76
VCL-203ENST00000461383 VIPR1P32241 457 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 YBX1P67809 324 aaKnown RBP4.05□□□□□ -1.76
VCL-203ENST00000461383 SRSF3P84103 164 aaKnown RBP4.05□□□□□ -1.76
VCL-203ENST00000461383 CACNB2Q08289 660 aaPredicted RBP4.05□□□□□ -1.76
VCL-203ENST00000461383 MAP3K12Q12852 859 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 NFATC3Q12968 1075 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 BIRC2Q13490 618 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 MOGSQ13724 837 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 TARBP2Q15633 366 aaKnown RBP4.05□□□□□ -1.76
VCL-203ENST00000461383 MLANAQ16655 118 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 MUM1Q2TAK8 710 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 CR1LQ2VPA4 569 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 LRSAM1Q6UWE0 723 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 DPP8Q6V1X1 898 aaPredicted RBP4.05□□□□□ -1.76
VCL-203ENST00000461383 LIPIQ6XZB0 460 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 EPM2AIP1Q7L775 607 aaPredicted RBP4.05□□□□□ -1.76
VCL-203ENST00000461383 KCNK18Q7Z418 384 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 CATIPQ7Z7H3 387 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 SIAH1Q8IUQ4 282 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 GRAMD1CQ8IYS0 662 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 THEMISQ8N1K5 641 aaPredicted RBP4.05□□□□□ -1.76
VCL-203ENST00000461383 CAMKK1Q8N5S9 505 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 CDYL2Q8N8U2 506 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 GAB3Q8WWW8 586 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 RSAD2Q8WXG1 361 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 TMEM209Q96SK2 561 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 MAP3K14Q99558 947 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 BTBD2Q9BX70 525 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 RNF38Q9H0F5 515 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 OR10A5Q9H207 317 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 PCDH18Q9HCL0 1135 aa4.05□□□□□ -1.76
VCL-203ENST00000461383 ANLNQ9NQW6 1124 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms