RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 SUCLA2Q9P2R7 463 aaPredicted RBP25.15■■□□□ 1.62
TRAF4-207ENST00000461195 DENND3A2RUS2 1198 aa25.14■■□□□ 1.62
TRAF4-207ENST00000461195 MGEA5O60502 916 aa25.14■■□□□ 1.62
TRAF4-207ENST00000461195 STAG3L1P0CL83 205 aa25.14■■□□□ 1.62
TRAF4-207ENST00000461195 TECP42680 631 aa25.14■■□□□ 1.62
TRAF4-207ENST00000461195 XKR9Q5GH70 373 aa25.14■■□□□ 1.62
TRAF4-207ENST00000461195 SYMPKQ92797 1274 aaKnown RBP25.14■■□□□ 1.62
TRAF4-207ENST00000461195 ADAM2Q99965 735 aa25.14■■□□□ 1.62
TRAF4-207ENST00000461195 DHX33Q9H6R0 707 aaKnown RBP25.14■■□□□ 1.62
TRAF4-207ENST00000461195 MTUS1Q9ULD2 1270 aa25.14■■□□□ 1.62
TRAF4-207ENST00000461195 TRANK1O15050 2925 aa25.14■■□□□ 1.61
TRAF4-207ENST00000461195 COL4A4P53420 1690 aaPredicted RBP25.13■■□□□ 1.61
TRAF4-207ENST00000461195 DARSP14868 501 aaKnown RBP25.13■■□□□ 1.61
TRAF4-207ENST00000461195 TOB1P50616 345 aaPredicted RBP25.13■■□□□ 1.61
TRAF4-207ENST00000461195 NBR1Q14596 966 aa25.13■■□□□ 1.61
TRAF4-207ENST00000461195 RHPN2Q8IUC4 686 aa25.13■■□□□ 1.61
TRAF4-207ENST00000461195 GCOM2Q9BZD3 368 aaPredicted RBP25.13■■□□□ 1.61
TRAF4-207ENST00000461195 RGS18Q9NS28 235 aa25.13■■□□□ 1.61
TRAF4-207ENST00000461195 C1orf112Q9NSG2 853 aa25.13■■□□□ 1.61
TRAF4-207ENST00000461195 ZBTB39O15060 712 aa25.12■■□□□ 1.61
TRAF4-207ENST00000461195 GTPBP6O43824 516 aaPredicted RBP25.12■■□□□ 1.61
TRAF4-207ENST00000461195 GAS2O43903 313 aaKnown RBP25.12■■□□□ 1.61
TRAF4-207ENST00000461195 DGKIO75912 1065 aa25.12■■□□□ 1.61
TRAF4-207ENST00000461195 POU3F3P20264 500 aaPredicted RBP25.12■■□□□ 1.61
TRAF4-207ENST00000461195 SARSP49591 514 aaKnown RBP25.12■■□□□ 1.61
TRAF4-207ENST00000461195 CUL4AQ13619 759 aa25.12■■□□□ 1.61
TRAF4-207ENST00000461195 ZNF410Q86VK4 478 aa25.12■■□□□ 1.61
TRAF4-207ENST00000461195 CRIPAKQ8N1N5 446 aa25.12■■□□□ 1.61
TRAF4-207ENST00000461195 FIBCD1Q8N539 461 aa25.12■■□□□ 1.61
TRAF4-207ENST00000461195 C4orf32Q8N8J7 132 aa25.12■■□□□ 1.61
TRAF4-207ENST00000461195 SAMD11Q96NU1 681 aa25.12■■□□□ 1.61
TRAF4-207ENST00000461195 C17orf80Q9BSJ5 609 aa25.12■■□□□ 1.61
TRAF4-207ENST00000461195 RC3H2Q9HBD1 1191 aaKnown RBP25.12■■□□□ 1.61
TRAF4-207ENST00000461195 ANKEF1Q9NU02 776 aa25.12■■□□□ 1.61
TRAF4-207ENST00000461195 RNF216Q9NWF9 866 aaPredicted RBP25.12■■□□□ 1.61
TRAF4-207ENST00000461195 LRFN2Q9ULH4 789 aa25.12■■□□□ 1.61
TRAF4-207ENST00000461195 NLRC5Q86WI3 1866 aa25.12■■□□□ 1.61
TRAF4-207ENST00000461195 ADGRA3Q8IWK6 1321 aa25.12■■□□□ 1.61
TRAF4-207ENST00000461195 RALGAPA2Q2PPJ7 1873 aa25.11■■□□□ 1.61
TRAF4-207ENST00000461195 GRB10Q13322 594 aa25.11■■□□□ 1.61
TRAF4-207ENST00000461195 LARP1BQ659C4 914 aaKnown RBP25.11■■□□□ 1.61
TRAF4-207ENST00000461195 SLC24A5Q71RS6 500 aa25.11■■□□□ 1.61
TRAF4-207ENST00000461195 ERMNQ8TAM6 284 aa25.11■■□□□ 1.61
TRAF4-207ENST00000461195 ZNF689Q96CS4 500 aaPredicted RBP25.11■■□□□ 1.61
TRAF4-207ENST00000461195 TUFT1Q9NNX1 390 aa25.11■■□□□ 1.61
TRAF4-207ENST00000461195 PRDM6Q9NQX0 595 aa25.11■■□□□ 1.61
TRAF4-207ENST00000461195 PCDHB6Q9Y5E3 794 aa25.11■■□□□ 1.61
TRAF4-207ENST00000461195 A0A087WZ62 844 aa25.1■■□□□ 1.61
TRAF4-207ENST00000461195 DSC3Q14574 896 aa25.1■■□□□ 1.61
TRAF4-207ENST00000461195 EMC2Q15006 297 aa25.1■■□□□ 1.61
TRAF4-207ENST00000461195 FBXO22Q8NEZ5 403 aa25.1■■□□□ 1.61
TRAF4-207ENST00000461195 GDPD5Q8WTR4 605 aa25.1■■□□□ 1.61
TRAF4-207ENST00000461195 TCP11Q8WWU5 503 aa25.1■■□□□ 1.61
TRAF4-207ENST00000461195 PSPC1Q8WXF1 523 aaKnown RBP25.1■■□□□ 1.61
TRAF4-207ENST00000461195 PPM1EQ8WY54 764 aa25.1■■□□□ 1.61
TRAF4-207ENST00000461195 TMEM143Q96AN5 459 aa25.1■■□□□ 1.61
TRAF4-207ENST00000461195 CCDC43Q96MW1 224 aaKnown RBP25.1■■□□□ 1.61
TRAF4-207ENST00000461195 FDXACB1Q9BRP7 624 aaPredicted RBP25.1■■□□□ 1.61
TRAF4-207ENST00000461195 BMP2KQ9NSY1 1161 aaPredicted RBP25.1■■□□□ 1.61
TRAF4-207ENST00000461195 PCDHB7Q9Y5E2 793 aa25.1■■□□□ 1.61
TRAF4-207ENST00000461195 COL4A3BPQ9Y5P4 624 aa25.1■■□□□ 1.61
TRAF4-207ENST00000461195 MTCH2Q9Y6C9 303 aa25.1■■□□□ 1.61
TRAF4-207ENST00000461195 C9IYK1 514 aa25.09■■□□□ 1.61
TRAF4-207ENST00000461195 LPXNO60711 386 aa25.09■■□□□ 1.61
TRAF4-207ENST00000461195 SPATA31C1P0DKV0 1188 aa25.09■■□□□ 1.61
TRAF4-207ENST00000461195 XRCC6P12956 609 aaKnown RBP eCLIP25.09■■□□□ 1.613e-10■■□□□ 12.6
TRAF4-207ENST00000461195 ZSCAN20P17040 1043 aaPredicted RBP25.09■■□□□ 1.61
TRAF4-207ENST00000461195 IBSPP21815 317 aaPredicted RBP25.09■■□□□ 1.61
TRAF4-207ENST00000461195 FXR2P51116 673 aaKnown RBP eCLIP25.09■■□□□ 1.61
TRAF4-207ENST00000461195 PTGDRQ13258 359 aa25.09■■□□□ 1.61
TRAF4-207ENST00000461195 BTG3Q14201 252 aaPredicted RBP25.09■■□□□ 1.61
TRAF4-207ENST00000461195 EPC2Q52LR7 807 aa25.09■■□□□ 1.61
TRAF4-207ENST00000461195 RILPL1Q5EBL4 403 aa25.09■■□□□ 1.61
TRAF4-207ENST00000461195 TJAP1Q5JTD0 557 aa25.09■■□□□ 1.61
TRAF4-207ENST00000461195 CATSPER3Q86XQ3 398 aa25.09■■□□□ 1.61
TRAF4-207ENST00000461195 KSR1Q8IVT5 923 aa25.09■■□□□ 1.61
TRAF4-207ENST00000461195 NLRP4Q96MN2 994 aa25.09■■□□□ 1.61
TRAF4-207ENST00000461195 MTRQ99707 1265 aa25.09■■□□□ 1.61
TRAF4-207ENST00000461195 POLR3CQ9BUI4 534 aaPredicted RBP25.09■■□□□ 1.61
TRAF4-207ENST00000461195 INO80BQ9C086 356 aaPredicted RBP25.09■■□□□ 1.61
TRAF4-207ENST00000461195 LAD1O00515 517 aa25.08■■□□□ 1.61
TRAF4-207ENST00000461195 MED24O75448 989 aa25.08■■□□□ 1.61
TRAF4-207ENST00000461195 FGFR4P22455 802 aa25.08■■□□□ 1.61
TRAF4-207ENST00000461195 CCDC85BQ15834 202 aaPredicted RBP25.08■■□□□ 1.61
TRAF4-207ENST00000461195 TMEM192Q8IY95 271 aa25.08■■□□□ 1.61
TRAF4-207ENST00000461195 CMTR2Q8IYT2 770 aaKnown RBP25.08■■□□□ 1.61
TRAF4-207ENST00000461195 MICALL1Q8N3F8 863 aa25.08■■□□□ 1.61
TRAF4-207ENST00000461195 PIGOQ8TEQ8 1089 aa25.08■■□□□ 1.61
TRAF4-207ENST00000461195 PRPF31Q8WWY3 499 aaKnown RBP25.08■■□□□ 1.61
TRAF4-207ENST00000461195 CSDE1O75534 798 aaKnown RBP25.07■■□□□ 1.6
TRAF4-207ENST00000461195 DGAT1O75907 488 aa25.07■■□□□ 1.6
TRAF4-207ENST00000461195 SFPQP23246 707 aaKnown RBP eCLIP25.07■■□□□ 1.6
TRAF4-207ENST00000461195 RPA1P27694 616 aa25.07■■□□□ 1.6
TRAF4-207ENST00000461195 RARRES1P49788 294 aa25.07■■□□□ 1.6
TRAF4-207ENST00000461195 FAM189BP81408 668 aa25.07■■□□□ 1.6
TRAF4-207ENST00000461195 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.07■■□□□ 1.6
TRAF4-207ENST00000461195 LMCD1Q9NZU5 365 aa25.07■■□□□ 1.6
TRAF4-207ENST00000461195 RWDD3Q9Y3V2 267 aa25.07■■□□□ 1.6
TRAF4-207ENST00000461195 ASAP2O43150 1006 aa25.06■■□□□ 1.6
TRAF4-207ENST00000461195 LAMTOR4Q0VGL1 99 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms