RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 CASC1Q6TDU7 716 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 MAMDC4Q6UXC1 1216 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 ACAD11Q709F0 780 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 SV2BQ7L1I2 683 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 NECAB2Q7Z6G3 386 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 RALYLQ86SE5 291 aaKnown RBP8.04□□□□□ -1.12
NUP50-212ENST00000461194 PAWRQ96IZ0 340 aaKnown RBP8.04□□□□□ -1.12
NUP50-212ENST00000461194 CORO1BQ9BR76 489 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 TINF2Q9BSI4 451 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 HTATIP2Q9BUP3 242 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 CBX8Q9HC52 389 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 A1CFQ9NQ94 594 aaKnown RBP8.04□□□□□ -1.12
NUP50-212ENST00000461194 HOMER2Q9NSB8 354 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 CCPG1Q9ULG6 757 aa8.04□□□□□ -1.12
NUP50-212ENST00000461194 WDR19Q8NEZ3 1342 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 SYNGAP1Q96PV0 1343 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 MYH4Q9Y623 1939 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 ERICH2A1L162 156 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 IFIT3O14879 490 aaKnown RBP8.03□□□□□ -1.12
NUP50-212ENST00000461194 SLC27A2O14975 620 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 ECEL1O95672 775 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 PARP1P09874 1014 aaKnown RBP8.03□□□□□ -1.12
NUP50-212ENST00000461194 ST13P50502 369 aaKnown RBP8.03□□□□□ -1.12
NUP50-212ENST00000461194 NRG1Q02297 640 aaPredicted RBP8.03□□□□□ -1.12
NUP50-212ENST00000461194 AP3B2Q13367 1082 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 SART3Q15020 963 aaKnown RBP8.03□□□□□ -1.12
NUP50-212ENST00000461194 MUM1L1Q5H9M0 696 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 PRAMEF19Q5SWL8 479 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 CREB3L3Q68CJ9 461 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 CD163Q86VB7 1156 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 MB21D2Q8IYB1 491 aaPredicted RBP8.03□□□□□ -1.12
NUP50-212ENST00000461194 FAM133AQ8N9E0 248 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 STK35Q8TDR2 534 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 DIS3LQ8TF46 1054 aaKnown RBP8.03□□□□□ -1.12
NUP50-212ENST00000461194 FGD4Q96M96 766 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 MTA3Q9BTC8 594 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 UBA5Q9GZZ9 404 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 SAMM50Q9Y512 469 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 PFASO15067 1338 aa8.03□□□□□ -1.12
NUP50-212ENST00000461194 LAMA4Q16363 1823 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 LOC100289279A0A1B0GTE1 492 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 C1QTNF9BB2RNN3 333 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 SNAI1O95863 264 aaPredicted RBP8.02□□□□□ -1.13
NUP50-212ENST00000461194 DLGAP3O95886 979 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 ZNF865P0CJ78 1059 aaPredicted RBP8.02□□□□□ -1.13
NUP50-212ENST00000461194 COL6A1P12109 1028 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 TAL1P17542 331 aaPredicted RBP8.02□□□□□ -1.13
NUP50-212ENST00000461194 NME2P22392 152 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 ANTXR2P58335 489 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 WTAPQ15007 396 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 CDC37Q16543 378 aaPredicted RBP8.02□□□□□ -1.13
NUP50-212ENST00000461194 CHST3Q7LGC8 479 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 SULF2Q8IWU5 870 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 ADGRF4Q8IZF3 695 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 AGGF1Q8N302 714 aaeCLIP8.02□□□□□ -1.13
NUP50-212ENST00000461194 IGDCC4Q8TDY8 1250 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 CLEC4DQ8WXI8 215 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 DPF3Q92784 378 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 NRSN2Q9GZP1 204 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 CPVLQ9H3G5 476 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 C11orf49Q9H6J7 331 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 AKTIPQ9H8T0 292 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 CYP39A1Q9NYL5 469 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 CNPY2Q9Y2B0 182 aa8.02□□□□□ -1.13
NUP50-212ENST00000461194 ASB14A6NK59 587 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 F8W735 103 aaPredicted RBP8.01□□□□□ -1.13
NUP50-212ENST00000461194 DNM1LO00429 736 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 NFIBO00712 420 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 TNRC18O15417 2968 aaPredicted RBP8.01□□□□□ -1.13
NUP50-212ENST00000461194 AKR1A1P14550 325 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 BMP6P22004 513 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 MCM5P33992 734 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 CHRNA4P43681 627 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 CNTN2Q02246 1040 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 TROAPQ12815 778 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 ACVR2BQ13705 512 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 GRM4Q14833 912 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 TMEM67Q5HYA8 995 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 ANO1Q5XXA6 986 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 NSMFQ6X4W1 530 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 ARMCX2Q7L311 632 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 TMTC2Q8N394 836 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 TMEM130Q8N3G9 435 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 ARRDC4Q8NCT1 418 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 WFDC12Q8WWY7 111 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 KCNB2Q92953 911 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 TMEM87BQ96K49 555 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 RUSC1Q9BVN2 902 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 MAF1Q9H063 256 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 ABHD16BQ9H3Z7 469 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 MAD2L2Q9UI95 211 aa8.01□□□□□ -1.13
NUP50-212ENST00000461194 COL11A1P12107 1806 aaPredicted RBP8.01□□□□□ -1.13
NUP50-212ENST00000461194 PDE4DIPQ5VU43 2346 aa8□□□□□ -1.13
NUP50-212ENST00000461194 LOC102724159A0A0B4J2E5 919 aa8□□□□□ -1.13
NUP50-212ENST00000461194 KLRF2D3W0D1 207 aa8□□□□□ -1.13
NUP50-212ENST00000461194 SH2B2O14492 632 aaPredicted RBP8□□□□□ -1.13
NUP50-212ENST00000461194 PRC1O43663 620 aa8□□□□□ -1.13
NUP50-212ENST00000461194 DHX16O60231 1041 aaKnown RBP8□□□□□ -1.13
NUP50-212ENST00000461194 CTSBP07858 339 aa8□□□□□ -1.13
NUP50-212ENST00000461194 GSTP1P09211 210 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms