RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 KIF5BP33176 963 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 SLC1A4P43007 532 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 OAZ1P54368 228 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 OXCT1P55809 520 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 HTRA3P83110 453 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 APOBRQ0VD83 1088 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 ST3GAL1Q11201 340 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 SREBF2Q12772 1141 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 PABPC4Q13310 644 aaKnown RBP eCLIP6.54□□□□□ -1.36
PTPN12-209ENST00000460731 CDK5R2Q13319 367 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 CUL4AQ13619 759 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 CCL15Q16663 113 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 IFI16Q16666 785 aaKnown RBP6.54□□□□□ -1.36
PTPN12-209ENST00000460731 ME3Q16798 604 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 SLC23A3Q6PIS1 610 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 LCNL1Q6ZST4 164 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 FAM160B2Q86V87 743 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 TEX2Q8IWB9 1127 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 FAM177A1Q8N128 213 aaPredicted RBP6.54□□□□□ -1.36
PTPN12-209ENST00000460731 GJD3Q8N144 294 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 LRRC47Q8N1G4 583 aaKnown RBP6.54□□□□□ -1.36
PTPN12-209ENST00000460731 MB21D1Q8N884 522 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 RGS22Q8NE09 1264 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 GTF3C2Q8WUA4 911 aaPredicted RBP6.54□□□□□ -1.36
PTPN12-209ENST00000460731 CHURC1Q8WUH1 139 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 P2RX7Q99572 595 aaKnown RBP6.54□□□□□ -1.36
PTPN12-209ENST00000460731 CORO1BQ9BR76 489 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 KRTAP17-1Q9BYP8 105 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 ASCC2Q9H1I8 757 aaPredicted RBP6.54□□□□□ -1.36
PTPN12-209ENST00000460731 RPAP3Q9H6T3 665 aaPredicted RBP6.54□□□□□ -1.36
PTPN12-209ENST00000460731 SLC38A10Q9HBR0 1119 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 RBM28Q9NW13 759 aaKnown RBP6.54□□□□□ -1.36
PTPN12-209ENST00000460731 TMOD4Q9NZQ9 345 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 CRIM1Q9NZV1 1036 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 RBPJLQ9UBG7 517 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 MORF4L1Q9UBU8 362 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 PLAGL2Q9UPG8 496 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 PARP14Q460N5 1801 aa6.54□□□□□ -1.36
PTPN12-209ENST00000460731 ZNF536O15090 1300 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 KLF18A0A0U1RQI7 1052 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 CCDC69A6NI79 296 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 PDHXO00330 501 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 VWA5AO00534 786 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 TMPRSS2O15393 492 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 FZD6O60353 706 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 TLR2O60603 784 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 CTDNEP1O95476 244 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 TSPAN15O95858 294 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 PARP1P09874 1014 aaKnown RBP6.53□□□□□ -1.36
PTPN12-209ENST00000460731 GCLCP48506 637 aaPredicted RBP6.53□□□□□ -1.36
PTPN12-209ENST00000460731 GHRHRQ02643 423 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 FAM83BQ5T0W9 1011 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 OTUD7BQ6GQQ9 843 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 TTBK2Q6IQ55 1244 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 C17orf99Q6UX52 265 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 TMTC3Q6ZXV5 915 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 GALNT12Q8IXK2 581 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 SPICE1Q8N0Z3 855 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 SRBD1Q8N5C6 995 aaKnown RBP6.53□□□□□ -1.36
PTPN12-209ENST00000460731 CHMP4CQ96CF2 233 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 TMX3Q96JJ7 454 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 NUP88Q99567 741 aaPredicted RBP6.53□□□□□ -1.36
PTPN12-209ENST00000460731 FEZ1Q99689 392 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 LLPHQ9BRT6 129 aaKnown RBP6.53□□□□□ -1.36
PTPN12-209ENST00000460731 RANBP17Q9H2T7 1088 aaKnown RBP6.53□□□□□ -1.36
PTPN12-209ENST00000460731 JMJD4Q9H9V9 463 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 LIN7BQ9HAP6 207 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 FBXO28Q9NVF7 368 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 SAGE1Q9NXZ1 904 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 FAM53CQ9NYF3 392 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 PNMA2Q9UL42 364 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 ZNF214Q9UL59 606 aaPredicted RBP6.53□□□□□ -1.36
PTPN12-209ENST00000460731 RABGAP1Q9Y3P9 1069 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 SMCHD1A6NHR9 2005 aa6.53□□□□□ -1.36
PTPN12-209ENST00000460731 LRRC10BA6NIK2 292 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.52□□□□□ -1.37
PTPN12-209ENST00000460731 TMEM232C9JQI7 657 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 PRPF3O43395 683 aaKnown RBP6.52□□□□□ -1.37
PTPN12-209ENST00000460731 DHX16O60231 1041 aaKnown RBP6.52□□□□□ -1.37
PTPN12-209ENST00000460731 CNMDO75829 334 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 LARGE1O95461 756 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 ITPKAP23677 461 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 STAT2P52630 851 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 HERVK_113P62684 666 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 ATP2B2Q01814 1243 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 MAP2K1Q02750 393 aaPredicted RBP6.52□□□□□ -1.37
PTPN12-209ENST00000460731 SCRN1Q12765 414 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 SYDE2Q5VT97 1194 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 SYNE3Q6ZMZ3 975 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 KCTD1Q719H9 257 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 RASGRP2Q7LDG7 609 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 ZSWIM9Q86XI8 627 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 ADGRF4Q8IZF3 695 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 CTCFLQ8NI51 663 aaPredicted RBP6.52□□□□□ -1.37
PTPN12-209ENST00000460731 SMARCC2Q8TAQ2 1214 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 GTF3C6Q969F1 213 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 INTS4Q96HW7 963 aaKnown RBP6.52□□□□□ -1.37
PTPN12-209ENST00000460731 TOX2Q96NM4 488 aa6.52□□□□□ -1.37
PTPN12-209ENST00000460731 PARK7Q99497 189 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms