RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 FOXO4P98177 505 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 MUM1Q2TAK8 710 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 CXorf57Q6NSI4 855 aaKnown RBP7.16□□□□□ -1.26
CCDC50-203ENST00000460064 STPG3Q8N7X2 389 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 RSAD2Q8WXG1 361 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 RELTQ969Z4 430 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 ZSWIM3Q96MP5 696 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 CLIC6Q96NY7 704 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 GORASP1Q9BQQ3 440 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 NOL10Q9BSC4 688 aaKnown RBP7.16□□□□□ -1.26
CCDC50-203ENST00000460064 MTG2Q9H4K7 406 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 ZNF277Q9NRM2 450 aaPredicted RBP7.16□□□□□ -1.26
CCDC50-203ENST00000460064 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.16□□□□□ -1.26
CCDC50-203ENST00000460064 FTSJ1Q9UET6 329 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 CROTQ9UKG9 612 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 DENND2AQ9ULE3 1009 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 ZBTB21Q9ULJ3 1066 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 N4BP3O15049 544 aa7.15□□□□□ -1.26
CCDC50-203ENST00000460064 C5AR1P21730 350 aa7.15□□□□□ -1.26
CCDC50-203ENST00000460064 TBX4P57082 545 aa7.15□□□□□ -1.26
CCDC50-203ENST00000460064 CCT2P78371 535 aaKnown RBP7.15□□□□□ -1.26
CCDC50-203ENST00000460064 IL13RA1P78552 427 aa7.15□□□□□ -1.26
CCDC50-203ENST00000460064 NFATC3Q12968 1075 aa7.15□□□□□ -1.26
CCDC50-203ENST00000460064 SPIDRQ14159 915 aa7.15□□□□□ -1.26
CCDC50-203ENST00000460064 GFOD2Q3B7J2 385 aa7.15□□□□□ -1.26
CCDC50-203ENST00000460064 LYSMD2Q8IV50 215 aa7.15□□□□□ -1.26
CCDC50-203ENST00000460064 IGDCC3Q8IVU1 814 aa7.15□□□□□ -1.26
CCDC50-203ENST00000460064 MIER2Q8N344 545 aa7.15□□□□□ -1.26
CCDC50-203ENST00000460064 GAB3Q8WWW8 586 aa7.15□□□□□ -1.26
CCDC50-203ENST00000460064 KCNN1Q92952 543 aa7.15□□□□□ -1.26
CCDC50-203ENST00000460064 CLIP3Q96DZ5 547 aa7.15□□□□□ -1.26
CCDC50-203ENST00000460064 LRGUKQ96M69 825 aa7.15□□□□□ -1.26
CCDC50-203ENST00000460064 C11orf84Q9BUA3 381 aaPredicted RBP7.15□□□□□ -1.26
CCDC50-203ENST00000460064 IFT122Q9HBG6 1241 aa7.15□□□□□ -1.26
CCDC50-203ENST00000460064 OPHN1O60890 802 aa7.14□□□□□ -1.27
CCDC50-203ENST00000460064 NDUFS2O75306 463 aa7.14□□□□□ -1.27
CCDC50-203ENST00000460064 ZRANB2O95218 330 aaKnown RBP eCLIP7.14□□□□□ -1.27
CCDC50-203ENST00000460064 CD83Q01151 205 aa7.14□□□□□ -1.27
CCDC50-203ENST00000460064 PPARAQ07869 468 aa7.14□□□□□ -1.27
CCDC50-203ENST00000460064 ADAM9Q13443 819 aa7.14□□□□□ -1.27
CCDC50-203ENST00000460064 GTF2H3Q13889 308 aa7.14□□□□□ -1.27
CCDC50-203ENST00000460064 MINDY4Q4G0A6 757 aa7.14□□□□□ -1.27
CCDC50-203ENST00000460064 CDYL2Q8N8U2 506 aa7.14□□□□□ -1.27
CCDC50-203ENST00000460064 KYQ8NBH2 561 aa7.14□□□□□ -1.27
CCDC50-203ENST00000460064 OR14C36Q8NHC7 312 aa7.14□□□□□ -1.27
CCDC50-203ENST00000460064 NUP88Q99567 741 aaPredicted RBP7.14□□□□□ -1.27
CCDC50-203ENST00000460064 CSRNP2Q9H175 543 aa7.14□□□□□ -1.27
CCDC50-203ENST00000460064 KCMF1Q9P0J7 381 aa7.14□□□□□ -1.27
CCDC50-203ENST00000460064 SYNPO2Q9UMS6 1093 aa7.14□□□□□ -1.27
CCDC50-203ENST00000460064 PCDHB6Q9Y5E3 794 aa7.14□□□□□ -1.27
CCDC50-203ENST00000460064 A0A0A6YYJ9 748 aa7.13□□□□□ -1.27
CCDC50-203ENST00000460064 XPAP23025 273 aaPredicted RBP7.13□□□□□ -1.27
CCDC50-203ENST00000460064 IGFBP6P24592 240 aaPredicted RBP7.13□□□□□ -1.27
CCDC50-203ENST00000460064 EPHB3P54753 998 aa7.13□□□□□ -1.27
CCDC50-203ENST00000460064 STILQ15468 1287 aa7.13□□□□□ -1.27
CCDC50-203ENST00000460064 WDR72Q3MJ13 1102 aa7.13□□□□□ -1.27
CCDC50-203ENST00000460064 CXXC5Q7LFL8 322 aaKnown RBP7.13□□□□□ -1.27
CCDC50-203ENST00000460064 SLC41A1Q8IVJ1 513 aa7.13□□□□□ -1.27
CCDC50-203ENST00000460064 TTLL6Q8N841 843 aa7.13□□□□□ -1.27
CCDC50-203ENST00000460064 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.13□□□□□ -1.27
CCDC50-203ENST00000460064 ZBTB8AQ96BR9 441 aa7.13□□□□□ -1.27
CCDC50-203ENST00000460064 HIST1H2AHQ96KK5 128 aa7.13□□□□□ -1.27
CCDC50-203ENST00000460064 NOX5Q96PH1 765 aa7.13□□□□□ -1.27
CCDC50-203ENST00000460064 HIST1H2AJQ99878 128 aa7.13□□□□□ -1.27
CCDC50-203ENST00000460064 ACE2Q9BYF1 805 aaPredicted RBP7.13□□□□□ -1.27
CCDC50-203ENST00000460064 PITHD1Q9GZP4 211 aaPredicted RBP7.13□□□□□ -1.27
CCDC50-203ENST00000460064 MAGEL2Q9UJ55 1249 aa7.13□□□□□ -1.27
CCDC50-203ENST00000460064 CDY2AQ9Y6F7 541 aa7.13□□□□□ -1.27
CCDC50-203ENST00000460064 CUTAO60888 179 aa7.12□□□□□ -1.27
CCDC50-203ENST00000460064 SEMA7AO75326 666 aa7.12□□□□□ -1.27
CCDC50-203ENST00000460064 CYP7B1O75881 506 aa7.12□□□□□ -1.27
CCDC50-203ENST00000460064 AKAP5P24588 427 aa7.12□□□□□ -1.27
CCDC50-203ENST00000460064 GNALP38405 381 aa7.12□□□□□ -1.27
CCDC50-203ENST00000460064 LIMS1P48059 325 aa7.12□□□□□ -1.27
CCDC50-203ENST00000460064 ADKP55263 362 aaKnown RBP7.12□□□□□ -1.27
CCDC50-203ENST00000460064 KIF23Q02241 960 aaPredicted RBP7.12□□□□□ -1.27
CCDC50-203ENST00000460064 MAP3K12Q12852 859 aa7.12□□□□□ -1.27
CCDC50-203ENST00000460064 SMAD4Q13485 552 aaKnown RBP7.12□□□□□ -1.27
CCDC50-203ENST00000460064 DGKDQ16760 1214 aa7.12□□□□□ -1.27
CCDC50-203ENST00000460064 RRP12Q5JTH9 1297 aaKnown RBP7.12□□□□□ -1.27
CCDC50-203ENST00000460064 MBNL2Q5VZF2 373 aaKnown RBP7.12□□□□□ -1.27
CCDC50-203ENST00000460064 KANK2Q63ZY3 851 aa7.12□□□□□ -1.27
CCDC50-203ENST00000460064 CCDC146Q8IYE0 955 aa7.12□□□□□ -1.27
CCDC50-203ENST00000460064 FBXO15Q8NCQ5 510 aaPredicted RBP7.12□□□□□ -1.27
CCDC50-203ENST00000460064 TSPEARQ8WU66 669 aa7.12□□□□□ -1.27
CCDC50-203ENST00000460064 FATE1Q969F0 183 aa7.12□□□□□ -1.27
CCDC50-203ENST00000460064 WRNIP1Q96S55 665 aa7.12□□□□□ -1.27
CCDC50-203ENST00000460064 GCM1Q9NP62 436 aa7.12□□□□□ -1.27
CCDC50-203ENST00000460064 KCND1Q9NSA2 647 aa7.12□□□□□ -1.27
CCDC50-203ENST00000460064 EVLQ9UI08 416 aaPredicted RBP7.12□□□□□ -1.27
CCDC50-203ENST00000460064 RCAN3Q9UKA8 241 aa7.12□□□□□ -1.27
CCDC50-203ENST00000460064 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.12□□□□□ -1.27
CCDC50-203ENST00000460064 CAND2O75155 1236 aa7.11□□□□□ -1.27
CCDC50-203ENST00000460064 CELA3BP08861 270 aa7.11□□□□□ -1.27
CCDC50-203ENST00000460064 HSPA6P17066 643 aa7.11□□□□□ -1.27
CCDC50-203ENST00000460064 TAL1P17542 331 aaPredicted RBP7.11□□□□□ -1.27
CCDC50-203ENST00000460064 LPOP22079 712 aaPredicted RBP7.11□□□□□ -1.27
CCDC50-203ENST00000460064 ADCY8P40145 1251 aa7.11□□□□□ -1.27
CCDC50-203ENST00000460064 GPR15P49685 360 aa7.11□□□□□ -1.27
CCDC50-203ENST00000460064 ANTXR2P58335 489 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms