RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 MRPL9Q9BYD2 267 aaKnown RBP8.97□□□□□ -0.97
HPS4-207ENST00000459918 IL25Q9H293 177 aa8.97□□□□□ -0.97
HPS4-207ENST00000459918 ELAC1Q9H777 363 aaKnown RBP8.97□□□□□ -0.97
HPS4-207ENST00000459918 CDHR5Q9HBB8 845 aa8.97□□□□□ -0.97
HPS4-207ENST00000459918 LY9Q9HBG7 655 aa8.97□□□□□ -0.97
HPS4-207ENST00000459918 AGO4Q9HCK5 861 aaKnown RBP8.97□□□□□ -0.97
HPS4-207ENST00000459918 SCUBE2Q9NQ36 999 aa8.97□□□□□ -0.97
HPS4-207ENST00000459918 DZANK1Q9NVP4 752 aa8.97□□□□□ -0.97
HPS4-207ENST00000459918 CEP131Q9UPN4 1083 aa8.97□□□□□ -0.97
HPS4-207ENST00000459918 SLC12A7Q9Y666 1083 aa8.97□□□□□ -0.97
HPS4-207ENST00000459918 DENND4AQ7Z401 1863 aa8.97□□□□□ -0.97
HPS4-207ENST00000459918 NFASCO94856 1347 aa8.97□□□□□ -0.97
HPS4-207ENST00000459918 DMDP11532 3685 aa8.96□□□□□ -0.97
HPS4-207ENST00000459918 C2orf71A6NGG8 1288 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 NT5C1B-RDH14C9J2C7 533 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 CLASP2O75122 1294 aaKnown RBP8.96□□□□□ -0.98
HPS4-207ENST00000459918 CXCL14O95715 111 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 ARP10275 920 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 TMOD1P28289 359 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 SMARCA1P28370 1054 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 MCM5P33992 734 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 PTH1RQ03431 593 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 RNASELQ05823 741 aaKnown RBP8.96□□□□□ -0.98
HPS4-207ENST00000459918 ITGB3BPQ13352 177 aaPredicted RBP8.96□□□□□ -0.98
HPS4-207ENST00000459918 ANGPT1Q15389 498 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 CEP55Q53EZ4 464 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 KIAA1841Q6NSI8 718 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 SWSAP1Q6NVH7 229 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 TMC5Q6UXY8 1006 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 CCDC149Q6ZUS6 474 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 MICU3Q86XE3 530 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 CCDC60Q8IWA6 550 aaPredicted RBP8.96□□□□□ -0.98
HPS4-207ENST00000459918 SMC5Q8IY18 1101 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 KIAA0319LQ8IZA0 1049 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 SIX5Q8N196 739 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 VPS52Q8N1B4 723 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 MRPL43Q8N983 215 aaKnown RBP8.96□□□□□ -0.98
HPS4-207ENST00000459918 CYP2W1Q8TAV3 490 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 HELQQ8TDG4 1101 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 IGDCC4Q8TDY8 1250 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 FAM212AQ96EL1 285 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 ZNF668Q96K58 619 aaPredicted RBP8.96□□□□□ -0.98
HPS4-207ENST00000459918 MAP3K14Q99558 947 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 ANO3Q9BYT9 981 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 CYP26B1Q9NR63 512 aa8.96□□□□□ -0.98
HPS4-207ENST00000459918 PTPRZ1P23471 2315 aaPredicted RBP8.96□□□□□ -0.98
HPS4-207ENST00000459918 EOMESO95936 686 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 FOSP01100 380 aaPredicted RBP8.95□□□□□ -0.98
HPS4-207ENST00000459918 EPCAMP16422 314 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 CLCN3P51790 818 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 BCAR1P56945 870 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 ANTXR2P58335 489 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 NLRP11P59045 1033 aaKnown RBP8.95□□□□□ -0.98
HPS4-207ENST00000459918 TDGQ13569 410 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 KCNC3Q14003 757 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 GIT2Q14161 759 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 LONRF3Q496Y0 759 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 KANK3Q6NY19 840 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 LRRC55Q6ZSA7 311 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 OTOP3Q7RTS5 596 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 DGLUCYQ7Z3D6 616 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 PLA2G4DQ86XP0 818 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 ECHDC2Q86YB7 292 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 MB21D2Q8IYB1 491 aaPredicted RBP8.95□□□□□ -0.98
HPS4-207ENST00000459918 KIAA2013Q8IYS2 634 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 ZDHHC14Q8IZN3 488 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 SLC39A11Q8N1S5 342 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 TMTC2Q8N394 836 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 LRRC71Q8N4P6 559 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 NLRP7Q8WX94 980 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 AUTS2Q8WXX7 1259 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 BBXQ8WY36 941 aaPredicted RBP8.95□□□□□ -0.98
HPS4-207ENST00000459918 YTHDC1Q96MU7 727 aaKnown RBP8.95□□□□□ -0.98
HPS4-207ENST00000459918 CASD1Q96PB1 797 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 ZNF577Q9BSK1 485 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 GBP3Q9H0R5 595 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 SFXN1Q9H9B4 322 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 NAP1L2Q9ULW6 460 aaPredicted RBP8.95□□□□□ -0.98
HPS4-207ENST00000459918 INPP5FQ9Y2H2 1132 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 TAF6LQ9Y6J9 622 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 CACNA1AO00555 2505 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 C2orf16Q68DN1 1984 aa8.95□□□□□ -0.98
HPS4-207ENST00000459918 FAM186AA6NE01 2351 aa8.94□□□□□ -0.98
HPS4-207ENST00000459918 DCHS1Q96JQ0 3298 aa8.94□□□□□ -0.98
HPS4-207ENST00000459918 WDR81Q562E7 1941 aa8.94□□□□□ -0.98
HPS4-207ENST00000459918 IPO5O00410 1097 aaKnown RBP8.94□□□□□ -0.98
HPS4-207ENST00000459918 SH2B2O14492 632 aaPredicted RBP8.94□□□□□ -0.98
HPS4-207ENST00000459918 C22orf31O95567 290 aa8.94□□□□□ -0.98
HPS4-207ENST00000459918 CCNE2O96020 404 aa8.94□□□□□ -0.98
HPS4-207ENST00000459918 SSBP05455 408 aaKnown RBP eCLIP8.94□□□□□ -0.98
HPS4-207ENST00000459918 PSAPP07602 524 aa8.94□□□□□ -0.98
HPS4-207ENST00000459918 CFHP08603 1231 aa8.94□□□□□ -0.98
HPS4-207ENST00000459918 AOC1P19801 751 aa8.94□□□□□ -0.98
HPS4-207ENST00000459918 AAMPQ13685 434 aa8.94□□□□□ -0.98
HPS4-207ENST00000459918 CLLU1OSQ5K130 101 aa8.94□□□□□ -0.98
HPS4-207ENST00000459918 SPECC1Q5M775 1068 aa8.94□□□□□ -0.98
HPS4-207ENST00000459918 TTC22Q5TAA0 569 aa8.94□□□□□ -0.98
HPS4-207ENST00000459918 CWF19L1Q69YN2 538 aaKnown RBP8.94□□□□□ -0.98
HPS4-207ENST00000459918 WWC2Q6AWC2 1192 aa8.94□□□□□ -0.98
HPS4-207ENST00000459918 EFCAB12Q6NXP0 572 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms