RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 C9IYK1 514 aa18.04■□□□□ 0.48
COL7A1-203ENST00000459756 RB1P06400 928 aa18.04■□□□□ 0.48
COL7A1-203ENST00000459756 DARSP14868 501 aaKnown RBP18.04■□□□□ 0.48
COL7A1-203ENST00000459756 ATP2B1P20020 1258 aa18.04■□□□□ 0.48
COL7A1-203ENST00000459756 YWHABP31946 246 aaKnown RBP18.04■□□□□ 0.48
COL7A1-203ENST00000459756 TXKP42681 527 aa18.04■□□□□ 0.48
COL7A1-203ENST00000459756 ORC2Q13416 577 aaPredicted RBP18.04■□□□□ 0.48
COL7A1-203ENST00000459756 DRP2Q13474 957 aa18.04■□□□□ 0.48
COL7A1-203ENST00000459756 GNL2Q13823 731 aaKnown RBP18.04■□□□□ 0.48
COL7A1-203ENST00000459756 SKIV2LQ15477 1246 aaKnown RBP18.04■□□□□ 0.48
COL7A1-203ENST00000459756 PTPROQ16827 1216 aa18.04■□□□□ 0.48
COL7A1-203ENST00000459756 NOSTRINQ8IVI9 506 aa18.04■□□□□ 0.48
COL7A1-203ENST00000459756 NEK9Q8TD19 979 aa18.04■□□□□ 0.48
COL7A1-203ENST00000459756 NLRP7Q8WX94 980 aa18.04■□□□□ 0.48
COL7A1-203ENST00000459756 DYDC2Q96IM9 177 aa18.04■□□□□ 0.48
COL7A1-203ENST00000459756 CEP170P1Q96L14 293 aa18.04■□□□□ 0.48
COL7A1-203ENST00000459756 TBC1D32Q96NH3 1257 aa18.04■□□□□ 0.48
COL7A1-203ENST00000459756 SUCLA2Q9P2R7 463 aaPredicted RBP18.04■□□□□ 0.48
COL7A1-203ENST00000459756 KIF3AQ9Y496 699 aa18.04■□□□□ 0.48
COL7A1-203ENST00000459756 C5orf67F2Z3F1 127 aa18.03■□□□□ 0.48
COL7A1-203ENST00000459756 SLITRK3O94933 977 aa18.03■□□□□ 0.48
COL7A1-203ENST00000459756 LINC00271P0C7V0 271 aa18.03■□□□□ 0.48
COL7A1-203ENST00000459756 MCM7P33993 719 aa18.03■□□□□ 0.48
COL7A1-203ENST00000459756 CTNNB1P35222 781 aa18.03■□□□□ 0.48
COL7A1-203ENST00000459756 BMPR1AP36894 532 aa18.03■□□□□ 0.48
COL7A1-203ENST00000459756 RFC5P40937 340 aa18.03■□□□□ 0.48
COL7A1-203ENST00000459756 MCM2P49736 904 aa18.03■□□□□ 0.48
COL7A1-203ENST00000459756 POLGP54098 1239 aaPredicted RBP18.03■□□□□ 0.48
COL7A1-203ENST00000459756 NPEPPSP55786 919 aa18.03■□□□□ 0.48
COL7A1-203ENST00000459756 CYP4A11Q02928 519 aa18.03■□□□□ 0.48
COL7A1-203ENST00000459756 GPM6BQ13491 265 aa18.03■□□□□ 0.48
COL7A1-203ENST00000459756 CTTNQ14247 550 aaKnown RBP18.03■□□□□ 0.48
COL7A1-203ENST00000459756 DSC3Q14574 896 aa18.03■□□□□ 0.48
COL7A1-203ENST00000459756 ZNF410Q86VK4 478 aa18.03■□□□□ 0.48
COL7A1-203ENST00000459756 TPH2Q8IWU9 490 aa18.03■□□□□ 0.48
COL7A1-203ENST00000459756 MRPL38Q96DV4 380 aaKnown RBP18.03■□□□□ 0.48
COL7A1-203ENST00000459756 ZNF668Q96K58 619 aaPredicted RBP18.03■□□□□ 0.48
COL7A1-203ENST00000459756 HSD17B14Q9BPX1 270 aa18.03■□□□□ 0.48
COL7A1-203ENST00000459756 EIF2AK1Q9BQI3 630 aaKnown RBP18.03■□□□□ 0.48
COL7A1-203ENST00000459756 C11orf84Q9BUA3 381 aaPredicted RBP18.03■□□□□ 0.48
COL7A1-203ENST00000459756 GCOM2Q9BZD3 368 aaPredicted RBP18.03■□□□□ 0.48
COL7A1-203ENST00000459756 DHX33Q9H6R0 707 aaKnown RBP18.03■□□□□ 0.48
COL7A1-203ENST00000459756 CUL9Q8IWT3 2517 aa18.03■□□□□ 0.48
COL7A1-203ENST00000459756 GAS2O43903 313 aaKnown RBP18.02■□□□□ 0.48
COL7A1-203ENST00000459756 LYPLA2O95372 231 aa18.02■□□□□ 0.48
COL7A1-203ENST00000459756 ZSCAN20P17040 1043 aaPredicted RBP18.02■□□□□ 0.48
COL7A1-203ENST00000459756 TRAPPC10P48553 1259 aa18.02■□□□□ 0.48
COL7A1-203ENST00000459756 FAM189BP81408 668 aa18.02■□□□□ 0.48
COL7A1-203ENST00000459756 MRPS5P82675 430 aaKnown RBP18.02■□□□□ 0.48
COL7A1-203ENST00000459756 TJAP1Q5JTD0 557 aa18.02■□□□□ 0.48
COL7A1-203ENST00000459756 RHPN2Q8IUC4 686 aa18.02■□□□□ 0.48
COL7A1-203ENST00000459756 ZNF579Q8NAF0 562 aaKnown RBP18.02■□□□□ 0.48
COL7A1-203ENST00000459756 SYMPKQ92797 1274 aaKnown RBP18.02■□□□□ 0.48
COL7A1-203ENST00000459756 TMX3Q96JJ7 454 aa18.02■□□□□ 0.48
COL7A1-203ENST00000459756 PLVAPQ9BX97 442 aa18.02■□□□□ 0.48
COL7A1-203ENST00000459756 COL25A1Q9BXS0 654 aaPredicted RBP18.02■□□□□ 0.48
COL7A1-203ENST00000459756 TMEM60Q9H2L4 133 aa18.02■□□□□ 0.48
COL7A1-203ENST00000459756 ELAC1Q9H777 363 aaKnown RBP18.02■□□□□ 0.48
COL7A1-203ENST00000459756 TMEM161AQ9NX61 479 aa18.02■□□□□ 0.48
COL7A1-203ENST00000459756 NOL7Q9UMY1 257 aaKnown RBP18.02■□□□□ 0.48
COL7A1-203ENST00000459756 IBSPP21815 317 aaPredicted RBP18.01■□□□□ 0.47
COL7A1-203ENST00000459756 U2AF2P26368 475 aaKnown RBP eCLIP18.01■□□□□ 0.47
COL7A1-203ENST00000459756 XKR9Q5GH70 373 aa18.01■□□□□ 0.47
COL7A1-203ENST00000459756 TTC38Q5R3I4 469 aa18.01■□□□□ 0.47
COL7A1-203ENST00000459756 ASB2Q96Q27 587 aa18.01■□□□□ 0.47
COL7A1-203ENST00000459756 INO80BQ9C086 356 aaPredicted RBP18.01■□□□□ 0.47
COL7A1-203ENST00000459756 ATP6V0A4Q9HBG4 840 aa18.01■□□□□ 0.47
COL7A1-203ENST00000459756 COG5Q9UP83 839 aa18.01■□□□□ 0.47
COL7A1-203ENST00000459756 MRPL42Q9Y6G3 142 aaKnown RBP18.01■□□□□ 0.47
COL7A1-203ENST00000459756 ARID2Q68CP9 1835 aa18■□□□□ 0.47
COL7A1-203ENST00000459756 A0A087WZ62 844 aa18■□□□□ 0.47
COL7A1-203ENST00000459756 CD2BP2O95400 341 aaKnown RBP18■□□□□ 0.47
COL7A1-203ENST00000459756 OR52Z1P0C646 297 aa18■□□□□ 0.47
COL7A1-203ENST00000459756 SFPQP23246 707 aaKnown RBP eCLIP18■□□□□ 0.47
COL7A1-203ENST00000459756 GATMP50440 423 aa18■□□□□ 0.47
COL7A1-203ENST00000459756 EMC2Q15006 297 aa18■□□□□ 0.47
COL7A1-203ENST00000459756 ZNF174Q15697 407 aa18■□□□□ 0.47
COL7A1-203ENST00000459756 AAK1Q2M2I8 961 aa18■□□□□ 0.47
COL7A1-203ENST00000459756 PAN2Q504Q3 1202 aaKnown RBP18■□□□□ 0.47
COL7A1-203ENST00000459756 TIGD5Q53EQ6 642 aa18■□□□□ 0.47
COL7A1-203ENST00000459756 TCP11Q8WWU5 503 aa18■□□□□ 0.47
COL7A1-203ENST00000459756 PSPC1Q8WXF1 523 aaKnown RBP18■□□□□ 0.47
COL7A1-203ENST00000459756 FDXACB1Q9BRP7 624 aaPredicted RBP18■□□□□ 0.47
COL7A1-203ENST00000459756 CHST12Q9NRB3 414 aa18■□□□□ 0.47
COL7A1-203ENST00000459756 ANKEF1Q9NU02 776 aa18■□□□□ 0.47
COL7A1-203ENST00000459756 DACT1Q9NYF0 836 aa18■□□□□ 0.47
COL7A1-203ENST00000459756 COL4A3BPQ9Y5P4 624 aa18■□□□□ 0.47
COL7A1-203ENST00000459756 SPTBN5Q9NRC6 3674 aaKnown RBP17.99■□□□□ 0.47
COL7A1-203ENST00000459756 ZBTB39O15060 712 aa17.99■□□□□ 0.47
COL7A1-203ENST00000459756 HOXA2O43364 376 aa17.99■□□□□ 0.47
COL7A1-203ENST00000459756 NAALADL2Q58DX5 795 aa17.99■□□□□ 0.47
COL7A1-203ENST00000459756 KSR1Q8IVT5 923 aa17.99■□□□□ 0.47
COL7A1-203ENST00000459756 PRPF31Q8WWY3 499 aaKnown RBP17.99■□□□□ 0.47
COL7A1-203ENST00000459756 P2RX5Q93086 422 aa17.99■□□□□ 0.47
COL7A1-203ENST00000459756 HLA-CQ95604 372 aa17.99■□□□□ 0.47
COL7A1-203ENST00000459756 TMEM143Q96AN5 459 aa17.99■□□□□ 0.47
COL7A1-203ENST00000459756 NLRP4Q96MN2 994 aa17.99■□□□□ 0.47
COL7A1-203ENST00000459756 LMAN2LQ9H0V9 348 aa17.99■□□□□ 0.47
COL7A1-203ENST00000459756 FNDC1Q4ZHG4 1894 aaPredicted RBP17.99■□□□□ 0.47
COL7A1-203ENST00000459756 POTEMA6NI47 508 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms