RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 ZBTB39O15060 712 aa17.99■□□□□ 0.47
CD28-203ENST00000458610 DARSP14868 501 aaKnown RBP17.99■□□□□ 0.47
CD28-203ENST00000458610 RARRES1P49788 294 aa17.99■□□□□ 0.47
CD28-203ENST00000458610 TFDP1Q14186 410 aa17.99■□□□□ 0.47
CD28-203ENST00000458610 ZNF579Q8NAF0 562 aaKnown RBP17.99■□□□□ 0.47
CD28-203ENST00000458610 SNX29Q8TEQ0 813 aa17.99■□□□□ 0.47
CD28-203ENST00000458610 PIGOQ8TEQ8 1089 aa17.99■□□□□ 0.47
CD28-203ENST00000458610 FAM161BQ96MY7 647 aa17.99■□□□□ 0.47
CD28-203ENST00000458610 TSPYL2Q9H2G4 693 aaPredicted RBP17.99■□□□□ 0.47
CD28-203ENST00000458610 COL4A3BPQ9Y5P4 624 aa17.99■□□□□ 0.47
CD28-203ENST00000458610 ARHGEF35A5YM69 484 aa17.98■□□□□ 0.47
CD28-203ENST00000458610 SLC26A4O43511 780 aa17.98■□□□□ 0.47
CD28-203ENST00000458610 UPP2O95045 317 aa17.98■□□□□ 0.47
CD28-203ENST00000458610 CA3P07451 260 aa17.98■□□□□ 0.47
CD28-203ENST00000458610 SFPQP23246 707 aaKnown RBP eCLIP17.98■□□□□ 0.47
CD28-203ENST00000458610 DRP2Q13474 957 aa17.98■□□□□ 0.47
CD28-203ENST00000458610 FAM117BQ6P1L5 589 aa17.98■□□□□ 0.47
CD28-203ENST00000458610 MCPH1Q8NEM0 835 aa17.98■□□□□ 0.47
CD28-203ENST00000458610 TMEM40Q8WWA1 233 aa17.98■□□□□ 0.47
CD28-203ENST00000458610 PRPF31Q8WWY3 499 aaKnown RBP17.98■□□□□ 0.47
CD28-203ENST00000458610 TMEM143Q96AN5 459 aa17.98■□□□□ 0.47
CD28-203ENST00000458610 AK8Q96MA6 479 aa17.98■□□□□ 0.47
CD28-203ENST00000458610 YME1L1Q96TA2 773 aa17.98■□□□□ 0.47
CD28-203ENST00000458610 TTYH1Q9H313 450 aaPredicted RBP17.98■□□□□ 0.47
CD28-203ENST00000458610 CHST12Q9NRB3 414 aa17.98■□□□□ 0.47
CD28-203ENST00000458610 LRFN2Q9ULH4 789 aa17.98■□□□□ 0.47
CD28-203ENST00000458610 DNM3Q9UQ16 869 aa17.98■□□□□ 0.47
CD28-203ENST00000458610 MTMR6Q9Y217 621 aa17.98■□□□□ 0.47
CD28-203ENST00000458610 A0A087WZ62 844 aa17.97■□□□□ 0.47
CD28-203ENST00000458610 VWA3AA6NCI4 1184 aa17.97■□□□□ 0.47
CD28-203ENST00000458610 MYOGP15173 224 aa17.97■□□□□ 0.47
CD28-203ENST00000458610 HTRA4P83105 476 aaPredicted RBP17.97■□□□□ 0.47
CD28-203ENST00000458610 SF3A1Q15459 793 aaKnown RBP17.97■□□□□ 0.47
CD28-203ENST00000458610 SLC24A5Q71RS6 500 aa17.97■□□□□ 0.47
CD28-203ENST00000458610 SRGAP1Q7Z6B7 1085 aa17.97■□□□□ 0.47
CD28-203ENST00000458610 FAM228AQ86W67 206 aa17.97■□□□□ 0.47
CD28-203ENST00000458610 NPAS4Q8IUM7 802 aa17.97■□□□□ 0.47
CD28-203ENST00000458610 CDK5RAP3Q96JB5 506 aa17.97■□□□□ 0.47
CD28-203ENST00000458610 NLRP4Q96MN2 994 aa17.97■□□□□ 0.47
CD28-203ENST00000458610 ADAM2Q99965 735 aa17.97■□□□□ 0.47
CD28-203ENST00000458610 FDXACB1Q9BRP7 624 aaPredicted RBP17.97■□□□□ 0.47
CD28-203ENST00000458610 NT5C3AQ9H0P0 336 aa17.97■□□□□ 0.47
CD28-203ENST00000458610 RGS18Q9NS28 235 aa17.97■□□□□ 0.47
CD28-203ENST00000458610 KIAA1024Q9UPX6 916 aa17.97■□□□□ 0.47
CD28-203ENST00000458610 WDR81Q562E7 1941 aa17.96■□□□□ 0.47
CD28-203ENST00000458610 SRGAP2CP0DJJ0 459 aa17.96■□□□□ 0.47
CD28-203ENST00000458610 POU5F1BQ06416 359 aa17.96■□□□□ 0.47
CD28-203ENST00000458610 NCBP1Q09161 790 aaKnown RBP17.96■□□□□ 0.47
CD28-203ENST00000458610 LAMTOR4Q0VGL1 99 aa17.96■□□□□ 0.47
CD28-203ENST00000458610 RESTQ13127 1097 aa17.96■□□□□ 0.47
CD28-203ENST00000458610 BECN1Q14457 450 aa17.96■□□□□ 0.47
CD28-203ENST00000458610 PCBP1Q15365 356 aaKnown RBP eCLIP17.96■□□□□ 0.47
CD28-203ENST00000458610 IL17AQ16552 155 aa17.96■□□□□ 0.47
CD28-203ENST00000458610 POTEGQ6S5H5 508 aa17.96■□□□□ 0.47
CD28-203ENST00000458610 RTN4RL1Q86UN2 441 aaPredicted RBP17.96■□□□□ 0.47
CD28-203ENST00000458610 GAS2L1Q99501 681 aaPredicted RBP17.96■□□□□ 0.47
CD28-203ENST00000458610 CDX2Q99626 313 aaPredicted RBP17.96■□□□□ 0.47
CD28-203ENST00000458610 TMX1Q9H3N1 280 aa17.96■□□□□ 0.47
CD28-203ENST00000458610 DACT1Q9NYF0 836 aa17.96■□□□□ 0.47
CD28-203ENST00000458610 STXBP5LQ9Y2K9 1186 aa17.96■□□□□ 0.47
CD28-203ENST00000458610 PCDHB7Q9Y5E2 793 aa17.96■□□□□ 0.47
CD28-203ENST00000458610 EVPLQ92817 2033 aa17.96■□□□□ 0.47
CD28-203ENST00000458610 RANBP2P49792 3224 aaKnown RBP17.96■□□□□ 0.47
CD28-203ENST00000458610 USO1O60763 962 aaKnown RBP17.95■□□□□ 0.46
CD28-203ENST00000458610 CYP11B2P19099 503 aa17.95■□□□□ 0.46
CD28-203ENST00000458610 LONP1P36776 959 aaKnown RBP17.95■□□□□ 0.46
CD28-203ENST00000458610 UBA7P41226 1012 aa17.95■□□□□ 0.46
CD28-203ENST00000458610 PHKA2P46019 1235 aa17.95■□□□□ 0.46
CD28-203ENST00000458610 SARSP49591 514 aaKnown RBP17.95■□□□□ 0.46
CD28-203ENST00000458610 GRIN2CQ14957 1233 aa17.95■□□□□ 0.46
CD28-203ENST00000458610 PADI6Q6TGC4 694 aa17.95■□□□□ 0.46
CD28-203ENST00000458610 TMCO2Q7Z6W1 182 aaPredicted RBP17.95■□□□□ 0.46
CD28-203ENST00000458610 ZNF668Q96K58 619 aaPredicted RBP17.95■□□□□ 0.46
CD28-203ENST00000458610 ZNF396Q96N95 335 aaPredicted RBP17.95■□□□□ 0.46
CD28-203ENST00000458610 SAMD11Q96NU1 681 aa17.95■□□□□ 0.46
CD28-203ENST00000458610 BMP2KQ9NSY1 1161 aaPredicted RBP17.95■□□□□ 0.46
CD28-203ENST00000458610 DDX19AQ9NUU7 478 aaKnown RBP17.95■□□□□ 0.46
CD28-203ENST00000458610 A0A087WWV3 80 aa17.94■□□□□ 0.46
CD28-203ENST00000458610 SKIP12755 728 aa17.94■□□□□ 0.46
CD28-203ENST00000458610 ARL2P36404 184 aa17.94■□□□□ 0.46
CD28-203ENST00000458610 TAP1Q03518 808 aa17.94■□□□□ 0.46
CD28-203ENST00000458610 CATSPER4Q7RTX7 472 aa17.94■□□□□ 0.46
CD28-203ENST00000458610 KSR1Q8IVT5 923 aa17.94■□□□□ 0.46
CD28-203ENST00000458610 RNF149Q8NC42 400 aa17.94■□□□□ 0.46
CD28-203ENST00000458610 SP7Q8TDD2 431 aaPredicted RBP17.94■□□□□ 0.46
CD28-203ENST00000458610 CALML4Q96GE6 196 aa17.94■□□□□ 0.46
CD28-203ENST00000458610 TGS1Q96RS0 853 aaKnown RBP17.94■□□□□ 0.46
CD28-203ENST00000458610 ELAC1Q9H777 363 aaKnown RBP17.94■□□□□ 0.46
CD28-203ENST00000458610 XPNPEP1Q9NQW7 623 aa17.94■□□□□ 0.46
CD28-203ENST00000458610 HOXA2O43364 376 aa17.93■□□□□ 0.46
CD28-203ENST00000458610 EYA4O95677 639 aa17.93■□□□□ 0.46
CD28-203ENST00000458610 FAM189BP81408 668 aa17.93■□□□□ 0.46
CD28-203ENST00000458610 DSC3Q14574 896 aa17.93■□□□□ 0.46
CD28-203ENST00000458610 ZRSR1Q15695 479 aaKnown RBP17.93■□□□□ 0.46
CD28-203ENST00000458610 FAM102BQ5T8I3 360 aa17.93■□□□□ 0.46
CD28-203ENST00000458610 FIBCD1Q8N539 461 aa17.93■□□□□ 0.46
CD28-203ENST00000458610 GUCD1Q96NT3 240 aa17.93■□□□□ 0.46
CD28-203ENST00000458610 POLR3FQ9H1D9 316 aaPredicted RBP17.93■□□□□ 0.46
CD28-203ENST00000458610 BHMT2Q9H2M3 363 aa17.93■□□□□ 0.46
CD28-203ENST00000458610 IFT122Q9HBG6 1241 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms