RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 PTGDRQ13258 359 aa20.86■□□□□ 0.93
USP39-209ENST00000458268 ADGRE1Q14246 886 aa20.86■□□□□ 0.93
USP39-209ENST00000458268 TGS1Q96RS0 853 aaKnown RBP20.86■□□□□ 0.93
USP39-209ENST00000458268 CEP89Q96ST8 783 aa20.86■□□□□ 0.93
USP39-209ENST00000458268 FDXACB1Q9BRP7 624 aaPredicted RBP20.86■□□□□ 0.93
USP39-209ENST00000458268 C17orf80Q9BSJ5 609 aa20.86■□□□□ 0.93
USP39-209ENST00000458268 ADAMTS10Q9H324 1103 aa20.86■□□□□ 0.93
USP39-209ENST00000458268 TTC3P53804 2025 aa20.85■□□□□ 0.93
USP39-209ENST00000458268 K7ELQ4 463 aaPredicted RBP20.85■□□□□ 0.93
USP39-209ENST00000458268 USO1O60763 962 aaKnown RBP20.85■□□□□ 0.93
USP39-209ENST00000458268 MED24O75448 989 aa20.85■□□□□ 0.93
USP39-209ENST00000458268 CCT6AP40227 531 aaKnown RBP20.85■□□□□ 0.93
USP39-209ENST00000458268 RFC5P40937 340 aa20.85■□□□□ 0.93
USP39-209ENST00000458268 CUL4AQ13619 759 aa20.85■□□□□ 0.93
USP39-209ENST00000458268 POTEGQ6S5H5 508 aa20.85■□□□□ 0.93
USP39-209ENST00000458268 MAEAQ7L5Y9 396 aa20.85■□□□□ 0.93
USP39-209ENST00000458268 RNF169Q8NCN4 708 aa20.85■□□□□ 0.93
USP39-209ENST00000458268 MTRQ99707 1265 aa20.85■□□□□ 0.93
USP39-209ENST00000458268 HSD17B14Q9BPX1 270 aa20.85■□□□□ 0.93
USP39-209ENST00000458268 GCOM2Q9BZD3 368 aaPredicted RBP20.85■□□□□ 0.93
USP39-209ENST00000458268 CSPG5O95196 566 aa20.84■□□□□ 0.93
USP39-209ENST00000458268 STAG3L1P0CL83 205 aa20.84■□□□□ 0.93
USP39-209ENST00000458268 SRGAP2CP0DJJ0 459 aa20.84■□□□□ 0.93
USP39-209ENST00000458268 DARSP14868 501 aaKnown RBP20.84■□□□□ 0.93
USP39-209ENST00000458268 EIF4BP23588 611 aaKnown RBP20.84■□□□□ 0.93
USP39-209ENST00000458268 GATMP50440 423 aa20.84■□□□□ 0.93
USP39-209ENST00000458268 HTRA4P83105 476 aaPredicted RBP20.84■□□□□ 0.93
USP39-209ENST00000458268 BTG3Q14201 252 aaPredicted RBP20.84■□□□□ 0.93
USP39-209ENST00000458268 ZRSR1Q15695 479 aaKnown RBP20.84■□□□□ 0.93
USP39-209ENST00000458268 RILPL1Q5EBL4 403 aa20.84■□□□□ 0.93
USP39-209ENST00000458268 FIBCD1Q8N539 461 aa20.84■□□□□ 0.93
USP39-209ENST00000458268 TSPYL2Q9H2G4 693 aaPredicted RBP20.84■□□□□ 0.93
USP39-209ENST00000458268 LRWD1Q9UFC0 647 aa20.84■□□□□ 0.93
USP39-209ENST00000458268 COL4A3BPQ9Y5P4 624 aa20.84■□□□□ 0.93
USP39-209ENST00000458268 IGKV6-21A0A0C4DH24 114 aa20.83■□□□□ 0.93
USP39-209ENST00000458268 GTPBP6O43824 516 aaPredicted RBP20.83■□□□□ 0.93
USP39-209ENST00000458268 ZSCAN20P17040 1043 aaPredicted RBP20.83■□□□□ 0.93
USP39-209ENST00000458268 CATSPER3Q86XQ3 398 aa20.83■□□□□ 0.93
USP39-209ENST00000458268 NPAS4Q8IUM7 802 aa20.83■□□□□ 0.93
USP39-209ENST00000458268 HSCBQ8IWL3 235 aa20.83■□□□□ 0.93
USP39-209ENST00000458268 SLC17A8Q8NDX2 589 aa20.83■□□□□ 0.93
USP39-209ENST00000458268 FBXO22Q8NEZ5 403 aa20.83■□□□□ 0.93
USP39-209ENST00000458268 PRPF31Q8WWY3 499 aaKnown RBP20.83■□□□□ 0.93
USP39-209ENST00000458268 PSPC1Q8WXF1 523 aaKnown RBP20.83■□□□□ 0.93
USP39-209ENST00000458268 DHX33Q9H6R0 707 aaKnown RBP20.83■□□□□ 0.93
USP39-209ENST00000458268 ATP6V0A4Q9HBG4 840 aa20.83■□□□□ 0.93
USP39-209ENST00000458268 PCDHB7Q9Y5E2 793 aa20.83■□□□□ 0.93
USP39-209ENST00000458268 ADGRA3Q8IWK6 1321 aa20.82■□□□□ 0.92
USP39-209ENST00000458268 PP2D1A8MPX8 630 aa20.82■□□□□ 0.92
USP39-209ENST00000458268 HSP90AA1P07900 732 aaKnown RBP20.82■□□□□ 0.92
USP39-209ENST00000458268 SPATA31C1P0DKV0 1188 aa20.82■□□□□ 0.92
USP39-209ENST00000458268 CTNNB1P35222 781 aa20.82■□□□□ 0.92
USP39-209ENST00000458268 SARSP49591 514 aaKnown RBP20.82■□□□□ 0.92
USP39-209ENST00000458268 GRB10Q13322 594 aa20.82■□□□□ 0.92
USP39-209ENST00000458268 HAUS3Q68CZ6 603 aa20.82■□□□□ 0.92
USP39-209ENST00000458268 CATSPER4Q7RTX7 472 aa20.82■□□□□ 0.92
USP39-209ENST00000458268 EXOC8Q8IYI6 725 aa20.82■□□□□ 0.92
USP39-209ENST00000458268 C4orf32Q8N8J7 132 aa20.82■□□□□ 0.92
USP39-209ENST00000458268 SNX29Q8TEQ0 813 aa20.82■□□□□ 0.92
USP39-209ENST00000458268 TCP11Q8WWU5 503 aa20.82■□□□□ 0.92
USP39-209ENST00000458268 RAB34Q9BZG1 259 aa20.82■□□□□ 0.92
USP39-209ENST00000458268 TUFT1Q9NNX1 390 aa20.82■□□□□ 0.92
USP39-209ENST00000458268 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.82■□□□□ 0.92
USP39-209ENST00000458268 ANKEF1Q9NU02 776 aa20.82■□□□□ 0.92
USP39-209ENST00000458268 KIAA1671Q9BY89 1806 aa20.81■□□□□ 0.92
USP39-209ENST00000458268 PDCP20941 246 aa20.81■□□□□ 0.92
USP39-209ENST00000458268 SFPQP23246 707 aaKnown RBP eCLIP20.81■□□□□ 0.92
USP39-209ENST00000458268 LAMTOR4Q0VGL1 99 aa20.81■□□□□ 0.92
USP39-209ENST00000458268 SKIV2LQ15477 1246 aaKnown RBP20.81■□□□□ 0.92
USP39-209ENST00000458268 SPOUT1Q5T280 376 aaKnown RBP20.81■□□□□ 0.92
USP39-209ENST00000458268 DTHD1Q6ZMT9 781 aa20.81■□□□□ 0.92
USP39-209ENST00000458268 ZNF410Q86VK4 478 aa20.81■□□□□ 0.92
USP39-209ENST00000458268 SPRYD3Q8NCJ5 442 aa20.81■□□□□ 0.92
USP39-209ENST00000458268 C1orf112Q9NSG2 853 aa20.81■□□□□ 0.92
USP39-209ENST00000458268 PIN4Q9Y237 131 aaKnown RBP20.81■□□□□ 0.92
USP39-209ENST00000458268 PPME1Q9Y570 386 aa20.81■□□□□ 0.92
USP39-209ENST00000458268 CHD9Q3L8U1 2897 aa20.81■□□□□ 0.92
USP39-209ENST00000458268 RALGAPA2Q2PPJ7 1873 aa20.8■□□□□ 0.92
USP39-209ENST00000458268 ARHGEF35A5YM69 484 aa20.8■□□□□ 0.92
USP39-209ENST00000458268 LYPLA2O95372 231 aa20.8■□□□□ 0.92
USP39-209ENST00000458268 CDC25AP30304 524 aa20.8■□□□□ 0.92
USP39-209ENST00000458268 RARRES1P49788 294 aa20.8■□□□□ 0.92
USP39-209ENST00000458268 FXR2P51116 673 aaKnown RBP eCLIP20.8■□□□□ 0.92
USP39-209ENST00000458268 ERVK-21P61565 698 aa20.8■□□□□ 0.92
USP39-209ENST00000458268 CDC42EP1Q00587 391 aa20.8■□□□□ 0.92
USP39-209ENST00000458268 LONRF3Q496Y0 759 aa20.8■□□□□ 0.92
USP39-209ENST00000458268 SLC24A5Q71RS6 500 aa20.8■□□□□ 0.92
USP39-209ENST00000458268 ZNF710Q8N1W2 664 aa20.8■□□□□ 0.92
USP39-209ENST00000458268 RNF149Q8NC42 400 aa20.8■□□□□ 0.92
USP39-209ENST00000458268 SP7Q8TDD2 431 aaPredicted RBP20.8■□□□□ 0.92
USP39-209ENST00000458268 NACC1Q96RE7 527 aa20.8■□□□□ 0.92
USP39-209ENST00000458268 POLR3CQ9BUI4 534 aaPredicted RBP20.8■□□□□ 0.92
USP39-209ENST00000458268 POLR3FQ9H1D9 316 aaPredicted RBP20.8■□□□□ 0.92
USP39-209ENST00000458268 XPNPEP1Q9NQW7 623 aa20.8■□□□□ 0.92
USP39-209ENST00000458268 RGS18Q9NS28 235 aa20.8■□□□□ 0.92
USP39-209ENST00000458268 VWA3AA6NCI4 1184 aa20.79■□□□□ 0.92
USP39-209ENST00000458268 TBKBP1A7MCY6 615 aa20.79■□□□□ 0.92
USP39-209ENST00000458268 DGAT1O75907 488 aa20.79■□□□□ 0.92
USP39-209ENST00000458268 DGKIO75912 1065 aa20.79■□□□□ 0.92
USP39-209ENST00000458268 FGFR1P11362 822 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms