RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 YWHABP31946 246 aaKnown RBP18.15■□□□□ 0.5
CPSF6-203ENST00000456847 GPM6BQ13491 265 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 RHPN2Q8IUC4 686 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 CMTR2Q8IYT2 770 aaKnown RBP18.15■□□□□ 0.5
CPSF6-203ENST00000456847 NEK9Q8TD19 979 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 CCDC43Q96MW1 224 aaKnown RBP18.15■□□□□ 0.5
CPSF6-203ENST00000456847 GCOM2Q9BZD3 368 aaPredicted RBP18.15■□□□□ 0.5
CPSF6-203ENST00000456847 RC3H2Q9HBD1 1191 aaKnown RBP18.15■□□□□ 0.5
CPSF6-203ENST00000456847 RGS18Q9NS28 235 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 BMP2KQ9NSY1 1161 aaPredicted RBP18.15■□□□□ 0.5
CPSF6-203ENST00000456847 LMCD1Q9NZU5 365 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 CHD7Q9P2D1 2997 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 IGKV6-21A0A0C4DH24 114 aa18.14■□□□□ 0.49
CPSF6-203ENST00000456847 DARSP14868 501 aaKnown RBP18.14■□□□□ 0.49
CPSF6-203ENST00000456847 ZSCAN20P17040 1043 aaPredicted RBP18.14■□□□□ 0.49
CPSF6-203ENST00000456847 CDC42EP1Q00587 391 aa18.14■□□□□ 0.49
CPSF6-203ENST00000456847 XKR9Q5GH70 373 aa18.14■□□□□ 0.49
CPSF6-203ENST00000456847 SLC24A5Q71RS6 500 aa18.14■□□□□ 0.49
CPSF6-203ENST00000456847 NOSTRINQ8IVI9 506 aa18.14■□□□□ 0.49
CPSF6-203ENST00000456847 EXOC8Q8IYI6 725 aa18.14■□□□□ 0.49
CPSF6-203ENST00000456847 ZNF689Q96CS4 500 aaPredicted RBP18.14■□□□□ 0.49
CPSF6-203ENST00000456847 TMX3Q96JJ7 454 aa18.14■□□□□ 0.49
CPSF6-203ENST00000456847 TMEM60Q9H2L4 133 aa18.14■□□□□ 0.49
CPSF6-203ENST00000456847 PPME1Q9Y570 386 aa18.14■□□□□ 0.49
CPSF6-203ENST00000456847 FNDC1Q4ZHG4 1894 aaPredicted RBP18.14■□□□□ 0.49
CPSF6-203ENST00000456847 RFC5P40937 340 aa18.13■□□□□ 0.49
CPSF6-203ENST00000456847 MCM2P49736 904 aa18.13■□□□□ 0.49
CPSF6-203ENST00000456847 ZNF174Q15697 407 aa18.13■□□□□ 0.49
CPSF6-203ENST00000456847 PTPROQ16827 1216 aa18.13■□□□□ 0.49
CPSF6-203ENST00000456847 TTC38Q5R3I4 469 aa18.13■□□□□ 0.49
CPSF6-203ENST00000456847 NLRP4Q96MN2 994 aa18.13■□□□□ 0.49
CPSF6-203ENST00000456847 MTMR9Q96QG7 549 aa18.13■□□□□ 0.49
CPSF6-203ENST00000456847 A0A087WZ62 844 aa18.13■□□□□ 0.49
CPSF6-203ENST00000456847 POTEMA6NI47 508 aa18.13■□□□□ 0.49
CPSF6-203ENST00000456847 FGFR4P22455 802 aa18.13■□□□□ 0.49
CPSF6-203ENST00000456847 GATMP50440 423 aa18.13■□□□□ 0.49
CPSF6-203ENST00000456847 ORC2Q13416 577 aaPredicted RBP18.13■□□□□ 0.49
CPSF6-203ENST00000456847 ZNF579Q8NAF0 562 aaKnown RBP18.13■□□□□ 0.49
CPSF6-203ENST00000456847 FDXACB1Q9BRP7 624 aaPredicted RBP18.13■□□□□ 0.49
CPSF6-203ENST00000456847 C9IYK1 514 aa18.12■□□□□ 0.49
CPSF6-203ENST00000456847 H3BNC9 293 aa18.12■□□□□ 0.49
CPSF6-203ENST00000456847 CD2BP2O95400 341 aaKnown RBP18.12■□□□□ 0.49
CPSF6-203ENST00000456847 OR52Z1P0C646 297 aa18.12■□□□□ 0.49
CPSF6-203ENST00000456847 ZNF410Q86VK4 478 aa18.12■□□□□ 0.49
CPSF6-203ENST00000456847 C11orf84Q9BUA3 381 aaPredicted RBP18.12■□□□□ 0.49
CPSF6-203ENST00000456847 ATP6V0A4Q9HBG4 840 aa18.12■□□□□ 0.49
CPSF6-203ENST00000456847 MRPL42Q9Y6G3 142 aaKnown RBP18.12■□□□□ 0.49
CPSF6-203ENST00000456847 SLITRK3O94933 977 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 SFPQP23246 707 aaKnown RBP eCLIP18.11■□□□□ 0.49
CPSF6-203ENST00000456847 DSC3Q14574 896 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 EMC2Q15006 297 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 SPOUT1Q5T280 376 aaKnown RBP18.11■□□□□ 0.49
CPSF6-203ENST00000456847 ATXN2LQ8WWM7 1075 aaKnown RBP18.11■□□□□ 0.49
CPSF6-203ENST00000456847 PSPC1Q8WXF1 523 aaKnown RBP18.11■□□□□ 0.49
CPSF6-203ENST00000456847 TMEM143Q96AN5 459 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 INO80BQ9C086 356 aaPredicted RBP18.11■□□□□ 0.49
CPSF6-203ENST00000456847 COL4A3BPQ9Y5P4 624 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 TBKBP1A7MCY6 615 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 CSDE1O75534 798 aaKnown RBP18.11■□□□□ 0.49
CPSF6-203ENST00000456847 RB1P06400 928 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 BMPR1AP36894 532 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 TRAPPC10P48553 1259 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 TJAP1Q5JTD0 557 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 MCTP1Q6DN14 999 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 KSR1Q8IVT5 923 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 CRIPAKQ8N1N5 446 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 TCP11Q8WWU5 503 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 CLP1Q92989 425 aaKnown RBP18.11■□□□□ 0.49
CPSF6-203ENST00000456847 MRPL38Q96DV4 380 aaKnown RBP18.11■□□□□ 0.49
CPSF6-203ENST00000456847 MTRQ99707 1265 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 DHX33Q9H6R0 707 aaKnown RBP18.11■□□□□ 0.49
CPSF6-203ENST00000456847 TMEM161AQ9NX61 479 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 EYSQ5T1H1 3165 aa18.11■□□□□ 0.49
CPSF6-203ENST00000456847 ZBTB39O15060 712 aa18.1■□□□□ 0.49
CPSF6-203ENST00000456847 GAS2O43903 313 aaKnown RBP18.1■□□□□ 0.49
CPSF6-203ENST00000456847 GJB2P29033 226 aa18.1■□□□□ 0.49
CPSF6-203ENST00000456847 TECP42680 631 aa18.1■□□□□ 0.49
CPSF6-203ENST00000456847 MRPS5P82675 430 aaKnown RBP18.1■□□□□ 0.49
CPSF6-203ENST00000456847 TIGD5Q53EQ6 642 aa18.1■□□□□ 0.49
CPSF6-203ENST00000456847 RNF169Q8NCN4 708 aa18.1■□□□□ 0.49
CPSF6-203ENST00000456847 COL25A1Q9BXS0 654 aaPredicted RBP18.1■□□□□ 0.49
CPSF6-203ENST00000456847 ATG2AQ2TAZ0 1938 aa18.1■□□□□ 0.49
CPSF6-203ENST00000456847 C5orf67F2Z3F1 127 aa18.1■□□□□ 0.49
CPSF6-203ENST00000456847 H3BQV1 296 aa18.1■□□□□ 0.49
CPSF6-203ENST00000456847 CSPG5O95196 566 aa18.1■□□□□ 0.49
CPSF6-203ENST00000456847 NBR1Q14596 966 aa18.1■□□□□ 0.49
CPSF6-203ENST00000456847 CATSPER4Q7RTX7 472 aa18.1■□□□□ 0.49
CPSF6-203ENST00000456847 ERMNQ8TAM6 284 aa18.1■□□□□ 0.49
CPSF6-203ENST00000456847 SYMPKQ92797 1274 aaKnown RBP18.1■□□□□ 0.49
CPSF6-203ENST00000456847 HSD17B14Q9BPX1 270 aa18.1■□□□□ 0.49
CPSF6-203ENST00000456847 ELAC1Q9H777 363 aaKnown RBP18.1■□□□□ 0.49
CPSF6-203ENST00000456847 ANKEF1Q9NU02 776 aa18.1■□□□□ 0.49
CPSF6-203ENST00000456847 DACT1Q9NYF0 836 aa18.1■□□□□ 0.49
CPSF6-203ENST00000456847 SMC3Q9UQE7 1217 aa18.1■□□□□ 0.49
CPSF6-203ENST00000456847 LYPLA2O95372 231 aa18.09■□□□□ 0.49
CPSF6-203ENST00000456847 LINC00271P0C7V0 271 aa18.09■□□□□ 0.49
CPSF6-203ENST00000456847 FGFR1P11362 822 aa18.09■□□□□ 0.49
CPSF6-203ENST00000456847 U2AF2P26368 475 aaKnown RBP eCLIP18.09■□□□□ 0.496e-8■■■■□ 21.5
CPSF6-203ENST00000456847 FAM102BQ5T8I3 360 aa18.09■□□□□ 0.49
CPSF6-203ENST00000456847 ABI1Q8IZP0 508 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms