RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 GOLGA8AA7E2F4 631 aa13.48□□□□□ -0.25
LMCD1-206ENST00000456506 GOLGA8BA8MQT2 603 aa13.48□□□□□ -0.25
LMCD1-206ENST00000456506 STBD1O95210 358 aa13.48□□□□□ -0.25
LMCD1-206ENST00000456506 PDGFBP01127 241 aaPredicted RBP13.48□□□□□ -0.25
LMCD1-206ENST00000456506 EIF4BP23588 611 aaKnown RBP13.48□□□□□ -0.25
LMCD1-206ENST00000456506 TECP42680 631 aa13.48□□□□□ -0.25
LMCD1-206ENST00000456506 GPC3P51654 580 aa13.48□□□□□ -0.25
LMCD1-206ENST00000456506 NLRP11P59045 1033 aaKnown RBP13.48□□□□□ -0.25
LMCD1-206ENST00000456506 SETQ01105 290 aaPredicted RBP13.48□□□□□ -0.25
LMCD1-206ENST00000456506 UGCGQ16739 394 aa13.48□□□□□ -0.25
LMCD1-206ENST00000456506 SUGP1Q8IWZ8 645 aaKnown RBP13.48□□□□□ -0.25
LMCD1-206ENST00000456506 LRRC43Q8N309 656 aa13.48□□□□□ -0.25
LMCD1-206ENST00000456506 LRRC71Q8N4P6 559 aa13.48□□□□□ -0.25
LMCD1-206ENST00000456506 FEZF2Q8TBJ5 459 aa13.48□□□□□ -0.25
LMCD1-206ENST00000456506 NGRNQ9NPE2 291 aaKnown RBP13.48□□□□□ -0.25
LMCD1-206ENST00000456506 PCDHA10Q9Y5I2 948 aa13.48□□□□□ -0.25
LMCD1-206ENST00000456506 HCFC2Q9Y5Z7 792 aa13.48□□□□□ -0.25
LMCD1-206ENST00000456506 C2orf71A6NGG8 1288 aa13.47□□□□□ -0.25
LMCD1-206ENST00000456506 MAGEB2O15479 319 aa13.47□□□□□ -0.25
LMCD1-206ENST00000456506 PSAPP07602 524 aa13.47□□□□□ -0.25
LMCD1-206ENST00000456506 HOXB8P17481 243 aaPredicted RBP13.47□□□□□ -0.25
LMCD1-206ENST00000456506 AVPR2P30518 371 aa13.47□□□□□ -0.25
LMCD1-206ENST00000456506 DRP2Q13474 957 aa13.47□□□□□ -0.25
LMCD1-206ENST00000456506 TARBP2Q15633 366 aaKnown RBP13.47□□□□□ -0.25
LMCD1-206ENST00000456506 NTRK3Q16288 839 aa13.47□□□□□ -0.25
LMCD1-206ENST00000456506 BMP2KLQ5H9B9 411 aa13.47□□□□□ -0.25
LMCD1-206ENST00000456506 RNF20Q5VTR2 975 aa13.47□□□□□ -0.25
LMCD1-206ENST00000456506 EFCAB12Q6NXP0 572 aa13.47□□□□□ -0.25
LMCD1-206ENST00000456506 METTL13Q8N6R0 699 aa13.47□□□□□ -0.25
LMCD1-206ENST00000456506 MRPL43Q8N983 215 aaKnown RBP13.47□□□□□ -0.25
LMCD1-206ENST00000456506 KCNB2Q92953 911 aa13.47□□□□□ -0.25
LMCD1-206ENST00000456506 ZNF558Q96NG5 402 aa13.47□□□□□ -0.25
LMCD1-206ENST00000456506 APOL5Q9BWW9 433 aa13.47□□□□□ -0.25
LMCD1-206ENST00000456506 POMKQ9H5K3 350 aa13.47□□□□□ -0.25
LMCD1-206ENST00000456506 CEP131Q9UPN4 1083 aa13.47□□□□□ -0.25
LMCD1-206ENST00000456506 FANCMQ8IYD8 2048 aa13.47□□□□□ -0.25
LMCD1-206ENST00000456506 A0A0U1RQF3 1178 aa13.46□□□□□ -0.25
LMCD1-206ENST00000456506 HOXA2O43364 376 aa13.46□□□□□ -0.25
LMCD1-206ENST00000456506 CLASP2O75122 1294 aaKnown RBP13.46□□□□□ -0.25
LMCD1-206ENST00000456506 OATP04181 439 aa13.46□□□□□ -0.25
LMCD1-206ENST00000456506 DARSP14868 501 aaKnown RBP13.46□□□□□ -0.25
LMCD1-206ENST00000456506 CPA1P15085 419 aa13.46□□□□□ -0.25
LMCD1-206ENST00000456506 PPM1AP35813 382 aa13.46□□□□□ -0.25
LMCD1-206ENST00000456506 PRR16Q569H4 304 aa13.46□□□□□ -0.25
LMCD1-206ENST00000456506 LLGL2Q6P1M3 1020 aa13.46□□□□□ -0.25
LMCD1-206ENST00000456506 B3GNT9Q6UX72 402 aa13.46□□□□□ -0.25
LMCD1-206ENST00000456506 TRMT1LQ7Z2T5 733 aaKnown RBP13.46□□□□□ -0.25
LMCD1-206ENST00000456506 TMEM173Q86WV6 379 aaPredicted RBP13.46□□□□□ -0.25
LMCD1-206ENST00000456506 CKAP2LQ8IYA6 745 aa13.46□□□□□ -0.25
LMCD1-206ENST00000456506 REXO1Q8N1G1 1221 aaKnown RBP13.46□□□□□ -0.25
LMCD1-206ENST00000456506 ZNF668Q96K58 619 aaPredicted RBP13.46□□□□□ -0.25
LMCD1-206ENST00000456506 FAM167AQ96KS9 214 aa13.46□□□□□ -0.25
LMCD1-206ENST00000456506 RIPOR3Q96MK2 946 aa13.46□□□□□ -0.25
LMCD1-206ENST00000456506 AGXT2Q9BYV1 514 aa13.46□□□□□ -0.25
LMCD1-206ENST00000456506 SMOC2Q9H3U7 446 aa13.46□□□□□ -0.25
LMCD1-206ENST00000456506 ENTPD7Q9NQZ7 604 aa13.46□□□□□ -0.25
LMCD1-206ENST00000456506 FAM86C1Q9NVL1 165 aa13.46□□□□□ -0.25
LMCD1-206ENST00000456506 SPG21Q9NZD8 308 aa13.46□□□□□ -0.25
LMCD1-206ENST00000456506 IGKV6-21A0A0C4DH24 114 aa13.45□□□□□ -0.26
LMCD1-206ENST00000456506 MSH4O15457 936 aa13.45□□□□□ -0.26
LMCD1-206ENST00000456506 PRPF3O43395 683 aaKnown RBP13.45□□□□□ -0.26
LMCD1-206ENST00000456506 BRD1O95696 1058 aa13.45□□□□□ -0.26
LMCD1-206ENST00000456506 SRGAP2BP0DMP2 458 aa13.45□□□□□ -0.26
LMCD1-206ENST00000456506 FGFR4P22455 802 aa13.45□□□□□ -0.26
LMCD1-206ENST00000456506 PRKCEQ02156 737 aa13.45□□□□□ -0.26
LMCD1-206ENST00000456506 MCTP2Q6DN12 878 aa13.45□□□□□ -0.26
LMCD1-206ENST00000456506 ZNF710Q8N1W2 664 aa13.45□□□□□ -0.26
LMCD1-206ENST00000456506 FBXL16Q8N461 479 aa13.45□□□□□ -0.26
LMCD1-206ENST00000456506 KREMEN2Q8NCW0 462 aa13.45□□□□□ -0.26
LMCD1-206ENST00000456506 CASP10Q92851 521 aa13.45□□□□□ -0.26
LMCD1-206ENST00000456506 SLC5A5Q92911 643 aa13.45□□□□□ -0.26
LMCD1-206ENST00000456506 TRAIPQ9BWF2 469 aa13.45□□□□□ -0.26
LMCD1-206ENST00000456506 ZBP1Q9H171 429 aa13.45□□□□□ -0.26
LMCD1-206ENST00000456506 ADAM7Q9H2U9 754 aa13.45□□□□□ -0.26
LMCD1-206ENST00000456506 PUF60Q9UHX1 559 aaKnown RBP13.45□□□□□ -0.26
LMCD1-206ENST00000456506 AKT3Q9Y243 479 aa13.45□□□□□ -0.26
LMCD1-206ENST00000456506 ZFHX2Q9C0A1 2572 aaPredicted RBP13.44□□□□□ -0.26
LMCD1-206ENST00000456506 WDR64B1ANS9 1081 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 C2CD4DB7Z1M9 353 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 PROB1E7EW31 1015 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 ST18O60284 1047 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 B4GALT3O60512 393 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 EOMESO95936 686 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 SP100P23497 879 aaPredicted RBP13.44□□□□□ -0.26
LMCD1-206ENST00000456506 METAP2P50579 478 aaKnown RBP eCLIP13.44□□□□□ -0.26
LMCD1-206ENST00000456506 SMC1AQ14683 1233 aaKnown RBP13.44□□□□□ -0.26
LMCD1-206ENST00000456506 TMC7Q7Z402 723 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 TMEM105Q8N8V8 129 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 HELQQ8TDG4 1101 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 SLC22A17Q8WUG5 538 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 BCL7CQ8WUZ0 217 aaPredicted RBP13.44□□□□□ -0.26
LMCD1-206ENST00000456506 GJA10Q969M2 543 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 VN1R3Q9BXE9 311 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 NIFKQ9BYG3 293 aaKnown RBP13.44□□□□□ -0.26
LMCD1-206ENST00000456506 UNC45AQ9H3U1 944 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 C6orf50Q9HD87 102 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 DISC1Q9NRI5 854 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 IRAK3Q9Y616 596 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 SPTBN4Q9H254 2564 aa13.44□□□□□ -0.26
LMCD1-206ENST00000456506 MYH15Q9Y2K3 1946 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms