RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 LRRC27Q9C0I9 530 aa11.91□□□□□ -0.5
SYPL1-202ENST00000455385 NUP62CLQ9H1M0 184 aa11.91□□□□□ -0.5
SYPL1-202ENST00000455385 SMIM35A0A1B0GVV1 85 aa11.91□□□□□ -0.5
SYPL1-202ENST00000455385 FRMD3A2A2Y4 597 aa11.91□□□□□ -0.5
SYPL1-202ENST00000455385 SARSP49591 514 aaKnown RBP11.91□□□□□ -0.5
SYPL1-202ENST00000455385 ASIC1P78348 528 aa11.91□□□□□ -0.5
SYPL1-202ENST00000455385 SNX17Q15036 470 aa11.91□□□□□ -0.5
SYPL1-202ENST00000455385 LRRC26Q2I0M4 334 aa11.91□□□□□ -0.5
SYPL1-202ENST00000455385 IER5Q5VY09 327 aa11.91□□□□□ -0.5
SYPL1-202ENST00000455385 FAM126BQ8IXS8 530 aa11.91□□□□□ -0.5
SYPL1-202ENST00000455385 EXOC8Q8IYI6 725 aa11.91□□□□□ -0.5
SYPL1-202ENST00000455385 TNS4Q8IZW8 715 aa11.91□□□□□ -0.5
SYPL1-202ENST00000455385 RETREG2Q8NC44 543 aa11.91□□□□□ -0.5
SYPL1-202ENST00000455385 SPATA20Q8TB22 786 aa11.91□□□□□ -0.5
SYPL1-202ENST00000455385 DNAJB3Q8WWF6 145 aa11.91□□□□□ -0.5
SYPL1-202ENST00000455385 DHX38Q92620 1227 aaKnown RBP11.91□□□□□ -0.5
SYPL1-202ENST00000455385 HPS3Q969F9 1004 aa11.91□□□□□ -0.5
SYPL1-202ENST00000455385 FAM49AQ9H0Q0 323 aaPredicted RBP11.91□□□□□ -0.5
SYPL1-202ENST00000455385 POLR3FQ9H1D9 316 aaPredicted RBP11.91□□□□□ -0.5
SYPL1-202ENST00000455385 SUCLA2Q9P2R7 463 aaPredicted RBP11.91□□□□□ -0.5
SYPL1-202ENST00000455385 CCDC85CA6NKD9 419 aa11.9□□□□□ -0.5
SYPL1-202ENST00000455385 CD4P01730 458 aa11.9□□□□□ -0.5
SYPL1-202ENST00000455385 VTNP04004 478 aa11.9□□□□□ -0.5
SYPL1-202ENST00000455385 MYL1P05976 194 aa11.9□□□□□ -0.5
SYPL1-202ENST00000455385 IDEP14735 1019 aa11.9□□□□□ -0.5
SYPL1-202ENST00000455385 GLRA2P23416 452 aa11.9□□□□□ -0.5
SYPL1-202ENST00000455385 ZNF131P52739 623 aa11.9□□□□□ -0.5
SYPL1-202ENST00000455385 SKOR2Q2VWA4 1001 aaPredicted RBP11.9□□□□□ -0.5
SYPL1-202ENST00000455385 TRIM60Q495X7 471 aa11.9□□□□□ -0.5
SYPL1-202ENST00000455385 C1orf53Q5VUE5 145 aa11.9□□□□□ -0.5
SYPL1-202ENST00000455385 ZNF668Q96K58 619 aaPredicted RBP11.9□□□□□ -0.5
SYPL1-202ENST00000455385 JPH2Q9BR39 696 aaPredicted RBP11.9□□□□□ -0.5
SYPL1-202ENST00000455385 PANK4Q9NVE7 773 aa11.9□□□□□ -0.5
SYPL1-202ENST00000455385 ODF2LQ9ULJ1 636 aa11.9□□□□□ -0.5
SYPL1-202ENST00000455385 PQBP1O60828 265 aaKnown RBP11.89□□□□□ -0.51
SYPL1-202ENST00000455385 RPN1P04843 607 aaKnown RBP11.89□□□□□ -0.51
SYPL1-202ENST00000455385 TLE2Q04725 743 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 EHHADHQ08426 723 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 TMEM62Q0P6H9 643 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 KMT5BQ4FZB7 885 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 UNC13DQ70J99 1090 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 ANKRD33Q7Z3H0 272 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 FIZ1Q96SL8 496 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 PPP1R16BQ96T49 567 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 TIPINQ9BVW5 301 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 SEZ6LQ9BYH1 1024 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 FGFBP2Q9BYJ0 223 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 ZHX3Q9H4I2 956 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 KIAA1468Q9P260 1216 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 MYH11P35749 1972 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 PVALEFA0A1B0GWK0 134 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 GAS2O43903 313 aaKnown RBP11.89□□□□□ -0.51
SYPL1-202ENST00000455385 FAM13AO94988 1023 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 TMOD1P28289 359 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 DNM2P50570 870 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 FAAP100Q0VG06 881 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 LAMTOR4Q0VGL1 99 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 COASYQ13057 564 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 PTK7Q13308 1070 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 TRIM71Q2Q1W2 868 aaKnown RBP11.89□□□□□ -0.51
SYPL1-202ENST00000455385 CCDC183Q5T5S1 534 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 NT5DC1Q5TFE4 455 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 ISM2Q6H9L7 571 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 RBM43Q6ZSC3 357 aaKnown RBP11.89□□□□□ -0.51
SYPL1-202ENST00000455385 RHPN2Q8IUC4 686 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 MYCT1Q8N699 235 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 TCP11Q8WWU5 503 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 PSPC1Q8WXF1 523 aaKnown RBP11.89□□□□□ -0.51
SYPL1-202ENST00000455385 KIFAP3Q92845 792 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 CDHR5Q9HBB8 845 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 TBC1D7Q9P0N9 293 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 HOOK1Q9UJC3 728 aaKnown RBP11.89□□□□□ -0.51
SYPL1-202ENST00000455385 AKT3Q9Y243 479 aa11.89□□□□□ -0.51
SYPL1-202ENST00000455385 GPR32O75388 356 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 SRGAP2CP0DJJ0 459 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 PLS3P13797 630 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 BMP6P22004 513 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 PEX3P56589 373 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 CAPSQ13938 189 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 HERC4Q5GLZ8 1057 aaPredicted RBP11.88□□□□□ -0.51
SYPL1-202ENST00000455385 TAF2Q6P1X5 1199 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 SFR1Q86XK3 245 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 CCDC65Q8IXS2 484 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 GLIS3Q8NEA6 775 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 SMARCE1Q969G3 411 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 CCDC34Q96HJ3 373 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 DRC1Q96MC2 740 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 NTPCRQ9BSD7 190 aaKnown RBP11.88□□□□□ -0.51
SYPL1-202ENST00000455385 ADAMTS10Q9H324 1103 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 PARVGQ9HBI0 331 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 COL4A3BPQ9Y5P4 624 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 TBCAO75347 108 aaKnown RBP11.88□□□□□ -0.51
SYPL1-202ENST00000455385 NPTX2P47972 431 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 RTP1P59025 263 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 NLRP11P59045 1033 aaKnown RBP11.88□□□□□ -0.51
SYPL1-202ENST00000455385 STK4Q13043 487 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 ODR4Q5SWX8 454 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 TOX2Q96NM4 488 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 GSDMAQ96QA5 445 aa11.88□□□□□ -0.51
SYPL1-202ENST00000455385 KIFC3Q9BVG8 833 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms