RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 FGD1P98174 961 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 SIGLEC14Q08ET2 396 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 TSGA10IPQ3SY00 556 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 SWSAP1Q6NVH7 229 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 TMEM184AQ6ZMB5 413 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 RAB11FIP4Q86YS3 637 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 CCDC60Q8IWA6 550 aaPredicted RBP9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 REXO1Q8N1G1 1221 aaKnown RBP9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 FBXL6Q8N531 539 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 METTL13Q8N6R0 699 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 COLGALT1Q8NBJ5 622 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 BICD2Q8TD16 824 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 RASGRP4Q8TDF6 673 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 SUSD6Q92537 303 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 MRPS27Q92552 414 aaKnown RBP9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 ZNF558Q96NG5 402 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 ZNF577Q9BSK1 485 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 LRRC2Q9BYS8 371 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 C6orf50Q9HD87 102 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 BARX2Q9UMQ3 279 aaPredicted RBP9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 NR2E1Q9Y466 385 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 PCDHA10Q9Y5I2 948 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 MAFBQ9Y5Q3 323 aaPredicted RBP9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 ZDBF2Q9HCK1 2354 aa9.09□□□□□ -0.95
NIF3L1-209ENST00000454952 WDR64B1ANS9 1081 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 FSCN2O14926 492 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 MGEA5O60502 916 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 C22orf31O95567 290 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 IBSPP21815 317 aaPredicted RBP9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 GATMP50440 423 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 CDC42EP1Q00587 391 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 AKAP17AQ02040 695 aaKnown RBP9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 FUT2Q10981 343 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 PFKFB3Q16875 520 aaPredicted RBP9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 KIZQ2M2Z5 673 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 BMP2KLQ5H9B9 411 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 FAM102BQ5T8I3 360 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 TYW1BQ6NUM6 668 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 TMC2Q8TDI7 906 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 TMEM40Q8WWA1 233 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 CASP10Q92851 521 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 PGBD1Q96JS3 809 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 RPGRIP1Q96KN7 1286 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 NECTIN4Q96NY8 510 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 OSMRQ99650 979 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 MRPL9Q9BYD2 267 aaKnown RBP9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 ZMYND12Q9H0C1 365 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 ENTPD7Q9NQZ7 604 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 NRBP2Q9NSY0 501 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 TYW1Q9NV66 732 aaKnown RBP9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 DACT1Q9NYF0 836 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 SPG21Q9NZD8 308 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 SAMM50Q9Y512 469 aa9.08□□□□□ -0.96
NIF3L1-209ENST00000454952 IGLV3-22A0A075B6J6 115 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 KLF18A0A0U1RQI7 1052 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 C2orf72A6NCS6 295 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 ZBTB42B2RXF5 422 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 FAM86B1E9PN63 330 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 RBAK-RBAKDNI3L0D1 243 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 TULP1O00294 542 aaPredicted RBP9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 PER2O15055 1255 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 DHX15O43143 795 aaKnown RBP9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 GPR32O75388 356 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 EOMESO95936 686 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 FAM86B2P0C5J1 330 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 SKIP12755 728 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 EIF4BP23588 611 aaKnown RBP9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 SFNP31947 248 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 TECP42680 631 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 METAP2P50579 478 aaKnown RBP eCLIP9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 EXOSC10Q01780 885 aaKnown RBP9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 ITIH3Q06033 890 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 DSC3Q14574 896 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 SMC1AQ14683 1233 aaKnown RBP9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 PTPN21Q16825 1174 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 JAKMIP3Q5VZ66 844 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 CES5AQ6NT32 575 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 ANKRD54Q6NXT1 300 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 KCNT2Q6UVM3 1135 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 ZBTB33Q86T24 672 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 FAM228AQ86W67 206 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 CCDC148Q8NFR7 591 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 CRYGNQ8WXF5 182 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 SCLT1Q96NL6 688 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 TCF25Q9BQ70 676 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 CWH43Q9H720 699 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 STK39Q9UEW8 545 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 BRPF3Q9ULD4 1205 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 NAP1L2Q9ULW6 460 aaPredicted RBP9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 AKT3Q9Y243 479 aa9.07□□□□□ -0.96
NIF3L1-209ENST00000454952 KMT2EQ8IZD2 1858 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 ST18O60284 1047 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 SEC24BO95487 1268 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 VTNP04004 478 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 OATP04181 439 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 FGFR1P11362 822 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 CIITAP33076 1130 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 ALDH7A1P49419 539 aaKnown RBP9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 JAK3P52333 1124 aa9.06□□□□□ -0.96
NIF3L1-209ENST00000454952 NLRP11P59045 1033 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms