RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 SEPT9Q9UHD8 586 aaPredicted RBP12.89□□□□□ -0.35
SEC16A-207ENST00000453963 LCMT1Q9UIC8 334 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 ANAPC7Q9UJX3 599 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 SSU72P8A0A1W2PR75 194 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 C21orf2O43822 256 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 CYP19A1P11511 503 aaPredicted RBP12.89□□□□□ -0.35
SEC16A-207ENST00000453963 IGBP1P78318 339 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 TMPRSS15P98073 1019 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 FMR1Q06787 632 aaKnown RBP eCLIP12.89□□□□□ -0.352e-6■■■□□ 15.9
SEC16A-207ENST00000453963 KLHL38Q2WGJ6 581 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 KRT39Q6A163 491 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 SESTD1Q86VW0 696 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 ARHGAP18Q8N392 663 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 TTC13Q8NBP0 860 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 ABTB1Q969K4 478 aaPredicted RBP12.89□□□□□ -0.35
SEC16A-207ENST00000453963 TGS1Q96RS0 853 aaKnown RBP12.89□□□□□ -0.35
SEC16A-207ENST00000453963 PFASO15067 1338 aa12.89□□□□□ -0.35
SEC16A-207ENST00000453963 PSMD14O00487 310 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 CREB3O43889 395 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 NCF2P19878 526 aaPredicted RBP12.88□□□□□ -0.35
SEC16A-207ENST00000453963 TRIML2Q8N7C3 387 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 TTC17Q96AE7 1141 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 CYTH2Q99418 400 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 SMYD2Q9NRG4 433 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 ESYT2A0FGR8 921 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 POTEMA6NI47 508 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 INO80B-WBP1J3KQ70 363 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 RFX1P22670 979 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 PRDX5P30044 214 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 RAD9BQ6WBX8 426 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 MIGA2Q7L4E1 593 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 SYNE4Q8N205 404 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 RFFLQ8WZ73 363 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 FAM149B1Q96BN6 582 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 CEP170P1Q96L14 293 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 INO80BQ9C086 356 aaPredicted RBP12.88□□□□□ -0.35
SEC16A-207ENST00000453963 IQGAP3Q86VI3 1631 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 ASNSP08243 561 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 SRGNP10124 158 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 FXR1P51114 621 aaKnown RBP eCLIP12.88□□□□□ -0.35
SEC16A-207ENST00000453963 CDR2Q01850 454 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 IFRD2Q12894 506 aaPredicted RBP12.88□□□□□ -0.35
SEC16A-207ENST00000453963 KNOP1Q1ED39 458 aaKnown RBP12.88□□□□□ -0.35
SEC16A-207ENST00000453963 FAM160B2Q86V87 743 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 PIP4K2CQ8TBX8 421 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 YY1AP1Q9H869 796 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 CDHR2Q9BYE9 1310 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 COL15A1P39059 1388 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 TNS3Q68CZ2 1445 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 LRRC7Q96NW7 1537 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 KRT38O76015 456 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 ARL4AP40617 200 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 NAALADL2Q58DX5 795 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 RAB44Q7Z6P3 723 aaPredicted RBP12.88□□□□□ -0.35
SEC16A-207ENST00000453963 SFR1Q86XK3 245 aa12.88□□□□□ -0.35
SEC16A-207ENST00000453963 AGTP01019 485 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 APOEP02649 317 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 OSBPP22059 807 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 ANXA13P27216 316 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 IRAK1P51617 712 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 CORO7P57737 925 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 PPP1R18Q6NYC8 613 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 RSBN1LQ6PCB5 846 aaPredicted RBP12.87□□□□□ -0.35
SEC16A-207ENST00000453963 PODNQ7Z5L7 613 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 ELOA2Q8IYF1 753 aaPredicted RBP12.87□□□□□ -0.35
SEC16A-207ENST00000453963 THOC1Q96FV9 657 aaKnown RBP12.87□□□□□ -0.35
SEC16A-207ENST00000453963 XAB2Q9HCS7 855 aaKnown RBP12.87□□□□□ -0.35
SEC16A-207ENST00000453963 TMEM179Q6ZVK1 233 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 RSRC2Q7L4I2 434 aaKnown RBP12.87□□□□□ -0.35
SEC16A-207ENST00000453963 CELF1Q92879 486 aaKnown RBP12.87□□□□□ -0.35
SEC16A-207ENST00000453963 CCSER1Q9C0I3 900 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 UPF3AQ9H1J1 476 aaKnown RBP12.87□□□□□ -0.35
SEC16A-207ENST00000453963 WNT8AQ9H1J5 351 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 CD209Q9NNX6 404 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 PRPSAP2O60256 369 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 ZBED1O96006 694 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 H2AFXP16104 143 aaPredicted RBP12.87□□□□□ -0.35
SEC16A-207ENST00000453963 SURF1Q15526 300 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 ADSSL1Q8N142 457 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 DNAAF3Q8N9W5 541 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 CCDC138Q96M89 665 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 TMEM47Q9BQJ4 181 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 ADAM22Q9P0K1 906 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 PIM2Q9P1W9 311 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 APOBEC2Q9Y235 224 aaKnown RBP12.87□□□□□ -0.35
SEC16A-207ENST00000453963 CPDO75976 1380 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 SYNJ2BP-COX16A0A087WUM0 186 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 ZNF233A6NK53 670 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 RASSF10A6NK89 507 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 HSPA9P38646 679 aaKnown RBP12.87□□□□□ -0.35
SEC16A-207ENST00000453963 RAD23BP54727 409 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 TMCO4Q5TGY1 634 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 FBXW10Q5XX13 1052 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 ENGASEQ8NFI3 743 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 CXorf38Q8TB03 319 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 NRBF2Q96F24 287 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 ISCA1Q9BUE6 129 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 COX16Q9P0S2 106 aa12.87□□□□□ -0.35
SEC16A-207ENST00000453963 FOXP2O15409 715 aa12.86□□□□□ -0.35
SEC16A-207ENST00000453963 HNRNPCL1O60812 293 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms