RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 RINT1Q6NUQ1 792 aa17.45■□□□□ 0.38
SNX17-204ENST00000453453 NRBP2Q9NSY0 501 aa17.45■□□□□ 0.38
SNX17-204ENST00000453453 PANK4Q9NVE7 773 aa17.45■□□□□ 0.38
SNX17-204ENST00000453453 SEPT9Q9UHD8 586 aaPredicted RBP17.45■□□□□ 0.38
SNX17-204ENST00000453453 ZBTB39O15060 712 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 LGR5O75473 907 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 IGHA2P01877 340 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 OATP04181 439 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 SLC26A2P50443 739 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 PRMT2P55345 433 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 PSMD2Q13200 908 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 STIM1Q13586 685 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 SPECC1LQ69YQ0 1117 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 PADI6Q6TGC4 694 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 PLPPR4Q7Z2D5 763 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 CEP112Q8N8E3 955 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 ENOX1Q8TC92 643 aaKnown RBP17.44■□□□□ 0.38
SNX17-204ENST00000453453 RAET1EQ8TD07 263 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 ZNF296Q8WUU4 475 aaPredicted RBP17.44■□□□□ 0.38
SNX17-204ENST00000453453 TRIB2Q92519 343 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 DNAJC19Q96DA6 116 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 PANX2Q96RD6 677 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 RUSC1Q9BVN2 902 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 TIPINQ9BVW5 301 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 SMARCAD1Q9H4L7 1026 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 MYH11P35749 1972 aa17.44■□□□□ 0.38
SNX17-204ENST00000453453 MAP2K7O14733 419 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 ZNF862O60290 1169 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 RPS6KA5O75582 802 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 AKR1A1P14550 325 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 ZNF18P17022 549 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 CAPN2P17655 700 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 GAP43P17677 238 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 PPP1R2P41236 205 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 RAD51AP2Q09MP3 1159 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 BRDTQ58F21 947 aaPredicted RBP17.43■□□□□ 0.38
SNX17-204ENST00000453453 ARSHQ5FYA8 562 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 TMEM63BQ5T3F8 832 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 GJC2Q5T442 439 aaPredicted RBP17.43■□□□□ 0.38
SNX17-204ENST00000453453 C1orf186Q6ZWK4 172 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 TRMT1LQ7Z2T5 733 aaKnown RBP17.43■□□□□ 0.38
SNX17-204ENST00000453453 AFG1LQ8WV93 481 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 CEP170P1Q96L14 293 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 REEP2Q9BRK0 252 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 FUT8Q9BYC5 575 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 AP5M1Q9H0R1 490 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 ZHX3Q9H4I2 956 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 ODF2LQ9ULJ1 636 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 COL4A3BPQ9Y5P4 624 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 NPHP3-ACAD11A0A0J9YXS1 232 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 FANCGO15287 622 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 ADCY3O60266 1144 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 FAM13AO94988 1023 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 GUCY2CP25092 1073 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 GNG11P61952 73 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 GIT2Q14161 759 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 PLA2G4FQ68DD2 849 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 ANO5Q75V66 913 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 MSANTD4Q8NCY6 345 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 PCYT2Q99447 389 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 GBP3Q9H0R5 595 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 FEZ2Q9UHY8 353 aaPredicted RBP17.43■□□□□ 0.38
SNX17-204ENST00000453453 RAB21Q9UL25 225 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 Q9Y3F1 56 aa17.43■□□□□ 0.38
SNX17-204ENST00000453453 USO1O60763 962 aaKnown RBP17.42■□□□□ 0.38
SNX17-204ENST00000453453 PPFIA4O75335 1185 aa17.42■□□□□ 0.38
SNX17-204ENST00000453453 ERLIN1O75477 346 aa17.42■□□□□ 0.38
SNX17-204ENST00000453453 SASH3O75995 380 aa17.42■□□□□ 0.38
SNX17-204ENST00000453453 HMGCRP04035 888 aa17.42■□□□□ 0.38
SNX17-204ENST00000453453 IVLP07476 585 aa17.42■□□□□ 0.38
SNX17-204ENST00000453453 CYBAP13498 195 aa17.42■□□□□ 0.38
SNX17-204ENST00000453453 COASYQ13057 564 aa17.42■□□□□ 0.38
SNX17-204ENST00000453453 DGKDQ16760 1214 aa17.42■□□□□ 0.38
SNX17-204ENST00000453453 SRGAP1Q7Z6B7 1085 aa17.42■□□□□ 0.38
SNX17-204ENST00000453453 TLK2Q86UE8 772 aa17.42■□□□□ 0.38
SNX17-204ENST00000453453 TC2NQ8N9U0 490 aa17.42■□□□□ 0.38
SNX17-204ENST00000453453 CYP26B1Q9NR63 512 aa17.42■□□□□ 0.38
SNX17-204ENST00000453453 PPME1Q9Y570 386 aa17.42■□□□□ 0.38
SNX17-204ENST00000453453 FRMD3A2A2Y4 597 aa17.41■□□□□ 0.38
SNX17-204ENST00000453453 DYNC1LI2O43237 492 aaPredicted RBP17.41■□□□□ 0.38
SNX17-204ENST00000453453 LGALS2P05162 132 aa17.41■□□□□ 0.38
SNX17-204ENST00000453453 MMP3P08254 477 aa17.41■□□□□ 0.38
SNX17-204ENST00000453453 CCDC175P0C221 793 aa17.41■□□□□ 0.38
SNX17-204ENST00000453453 BMP6P22004 513 aa17.41■□□□□ 0.38
SNX17-204ENST00000453453 ERCC5P28715 1186 aaPredicted RBP17.41■□□□□ 0.38
SNX17-204ENST00000453453 CACNB1Q02641 598 aaPredicted RBP17.41■□□□□ 0.38
SNX17-204ENST00000453453 HERC4Q5GLZ8 1057 aaPredicted RBP17.41■□□□□ 0.38
SNX17-204ENST00000453453 FAM26FQ5R3K3 315 aa17.41■□□□□ 0.38
SNX17-204ENST00000453453 NIFKQ9BYG3 293 aaKnown RBP17.41■□□□□ 0.38
SNX17-204ENST00000453453 PARD6BQ9BYG5 372 aa17.41■□□□□ 0.38
SNX17-204ENST00000453453 INTS13Q9NVM9 706 aa17.41■□□□□ 0.38
SNX17-204ENST00000453453 ERAP1Q9NZ08 941 aa17.41■□□□□ 0.38
SNX17-204ENST00000453453 GNEQ9Y223 722 aaKnown RBP17.41■□□□□ 0.38
SNX17-204ENST00000453453 DGAT1O75907 488 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 SEC31AO94979 1220 aaKnown RBP17.4■□□□□ 0.38
SNX17-204ENST00000453453 STBD1O95210 358 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 CNGA1P29973 690 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 CPT1AP50416 773 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 NPEPPSP55786 919 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 CAP1Q01518 475 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms