RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 MSH4O15457 936 aa13.19□□□□□ -0.3
GARNL3-210ENST00000453030 MAGEB2O15479 319 aa13.19□□□□□ -0.3
GARNL3-210ENST00000453030 ZSCAN20P17040 1043 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-210ENST00000453030 FGFR4P22455 802 aa13.19□□□□□ -0.3
GARNL3-210ENST00000453030 RPS6KB1P23443 525 aa13.19□□□□□ -0.3
GARNL3-210ENST00000453030 SP100P23497 879 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-210ENST00000453030 TMOD1P28289 359 aa13.19□□□□□ -0.3
GARNL3-210ENST00000453030 CIITAP33076 1130 aa13.19□□□□□ -0.3
GARNL3-210ENST00000453030 MRE11P49959 708 aa13.19□□□□□ -0.3
GARNL3-210ENST00000453030 LRRC55Q6ZSA7 311 aa13.19□□□□□ -0.3
GARNL3-210ENST00000453030 LINC01465Q8N7H1 131 aa13.19□□□□□ -0.3
GARNL3-210ENST00000453030 MRPS27Q92552 414 aaKnown RBP13.19□□□□□ -0.3
GARNL3-210ENST00000453030 MFSD14AQ96MC6 490 aa13.19□□□□□ -0.3
GARNL3-210ENST00000453030 CASD1Q96PB1 797 aa13.19□□□□□ -0.3
GARNL3-210ENST00000453030 CDCA3Q99618 268 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-210ENST00000453030 PHF7Q9BWX1 381 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-210ENST00000453030 RNF26Q9BY78 433 aaPredicted RBP13.19□□□□□ -0.3
GARNL3-210ENST00000453030 ADAMTS10Q9H324 1103 aa13.19□□□□□ -0.3
GARNL3-210ENST00000453030 ELAC1Q9H777 363 aaKnown RBP13.19□□□□□ -0.3
GARNL3-210ENST00000453030 DISC1Q9NRI5 854 aa13.19□□□□□ -0.3
GARNL3-210ENST00000453030 CACNA1HO95180 2353 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 FSD2A1L4K1 749 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 TMEM221A6NGB7 291 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 HIDE1A8MVS5 230 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 M0R296 226 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 HOXA2O43364 376 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 GAS7O60861 476 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 CSDE1O75534 798 aaKnown RBP13.18□□□□□ -0.3
GARNL3-210ENST00000453030 SRGAP2BP0DMP2 458 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 EIF4BP23588 611 aaKnown RBP13.18□□□□□ -0.3
GARNL3-210ENST00000453030 HSPA4P34932 840 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 TECP42680 631 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 GPC3P51654 580 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 CCT2P78371 535 aaKnown RBP13.18□□□□□ -0.3
GARNL3-210ENST00000453030 FAM189BP81408 668 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 TBC1D8BQ0IIM8 1120 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 NTRK3Q16288 839 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 CLLU1OSQ5K130 101 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 LRCH2Q5VUJ6 765 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 KCNT2Q6UVM3 1135 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 FAM43BQ6ZT52 329 aaPredicted RBP13.18□□□□□ -0.3
GARNL3-210ENST00000453030 TRIM67Q6ZTA4 783 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 ECHDC2Q86YB7 292 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 NLRP7Q8WX94 980 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 KCNB2Q92953 911 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 CCDC136Q96JN2 1154 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 ZNF558Q96NG5 402 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 TEKT3Q9BXF9 490 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 KCNH6Q9H252 994 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 UNC45AQ9H3U1 944 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 SEPT9Q9UHD8 586 aaPredicted RBP13.18□□□□□ -0.3
GARNL3-210ENST00000453030 MYO15AQ9UKN7 3530 aa13.18□□□□□ -0.3
GARNL3-210ENST00000453030 DENND4AQ7Z401 1863 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 TMEM150BA6NC51 233 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 EDIL3O43854 480 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 DARSP14868 501 aaKnown RBP13.17□□□□□ -0.3
GARNL3-210ENST00000453030 CA8P35219 290 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 PPM1AP35813 382 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 JAK3P52333 1124 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 NLRP5P59047 1200 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 ZXDAP98168 799 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 PLCB3Q01970 1234 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 DRP2Q13474 957 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 CBX2Q14781 532 aaPredicted RBP13.17□□□□□ -0.3
GARNL3-210ENST00000453030 MTERF2Q49AM1 385 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 PDE12Q6L8Q7 609 aaKnown RBP13.17□□□□□ -0.3
GARNL3-210ENST00000453030 TMC7Q7Z402 723 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 HELQQ8TDG4 1101 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 SUSD6Q92537 303 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 PBXIP1Q96AQ6 731 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 NRBP2Q9NSY0 501 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 PUF60Q9UHX1 559 aaKnown RBP13.17□□□□□ -0.3
GARNL3-210ENST00000453030 CDH22Q9UJ99 828 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 LZTS1Q9Y250 596 aa13.17□□□□□ -0.3
GARNL3-210ENST00000453030 C2orf16Q68DN1 1984 aa13.16□□□□□ -0.3
GARNL3-210ENST00000453030 TDP2O95551 362 aa13.16□□□□□ -0.3
GARNL3-210ENST00000453030 IFNAR1P17181 557 aa13.16□□□□□ -0.3
GARNL3-210ENST00000453030 ATF7P17544 494 aaPredicted RBP13.16□□□□□ -0.3
GARNL3-210ENST00000453030 SFNP31947 248 aa13.16□□□□□ -0.3
GARNL3-210ENST00000453030 ANKRD54Q6NXT1 300 aa13.16□□□□□ -0.3
GARNL3-210ENST00000453030 MIER3Q7Z3K6 550 aa13.16□□□□□ -0.3
GARNL3-210ENST00000453030 SUGP1Q8IWZ8 645 aaKnown RBP13.16□□□□□ -0.3
GARNL3-210ENST00000453030 TBCKQ8TEA7 893 aa13.16□□□□□ -0.3
GARNL3-210ENST00000453030 SLC5A5Q92911 643 aa13.16□□□□□ -0.3
GARNL3-210ENST00000453030 RIT2Q99578 217 aa13.16□□□□□ -0.3
GARNL3-210ENST00000453030 SH2D3AQ9BRG2 576 aa13.16□□□□□ -0.3
GARNL3-210ENST00000453030 AGXT2Q9BYV1 514 aa13.16□□□□□ -0.3
GARNL3-210ENST00000453030 TSHZ2Q9NRE2 1034 aa13.16□□□□□ -0.3
GARNL3-210ENST00000453030 NT5C1B-RDH14C9J2C7 533 aa13.15□□□□□ -0.3
GARNL3-210ENST00000453030 PDIA3P30101 505 aaKnown RBP13.15□□□□□ -0.3
GARNL3-210ENST00000453030 KRT17Q04695 432 aa13.15□□□□□ -0.3
GARNL3-210ENST00000453030 KCNC3Q14003 757 aa13.15□□□□□ -0.3
GARNL3-210ENST00000453030 LONRF3Q496Y0 759 aa13.15□□□□□ -0.3
GARNL3-210ENST00000453030 IER5LQ5T953 404 aa13.15□□□□□ -0.3
GARNL3-210ENST00000453030 SYCE2Q6PIF2 218 aa13.15□□□□□ -0.3
GARNL3-210ENST00000453030 ZBTB33Q86T24 672 aa13.15□□□□□ -0.3
GARNL3-210ENST00000453030 PRSS33Q8NF86 280 aa13.15□□□□□ -0.3
GARNL3-210ENST00000453030 NGRNQ9NPE2 291 aaKnown RBP13.15□□□□□ -0.3
GARNL3-210ENST00000453030 SPG21Q9NZD8 308 aa13.15□□□□□ -0.3
GARNL3-210ENST00000453030 TDRD15B5MCY1 1934 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms