RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 DLG4P78352 724 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 CNTN2Q02246 1040 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 NFRKBQ6P4R8 1299 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 REPS2Q8NFH8 660 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 ALS2CR12Q96Q35 445 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 ST7Q9NRC1 585 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 CYP39A1Q9NYL5 469 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 SMARCAL1Q9NZC9 954 aa12.87□□□□□ -0.35
VTA1-203ENST00000452973 SPDYE16A6NNV3 312 aaPredicted RBP12.86□□□□□ -0.35
VTA1-203ENST00000452973 FDX1P10109 184 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 PLS3P13797 630 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 FMO5P49326 533 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 KRT76Q01546 638 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
VTA1-203ENST00000452973 BMS1Q14692 1282 aaKnown RBP12.86□□□□□ -0.35
VTA1-203ENST00000452973 SLC18A3Q16572 532 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 ARHGAP44Q17R89 818 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 ZNF662Q6ZS27 426 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 ANO5Q75V66 913 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 ZNF571Q7Z3V5 609 aaPredicted RBP12.86□□□□□ -0.35
VTA1-203ENST00000452973 ANKRD35Q8N283 1001 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 CEP170P1Q96L14 293 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 ACAD9Q9H845 621 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 ARFGAP3Q9NP61 516 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 AFG3L2Q9Y4W6 797 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 PCDHA10Q9Y5I2 948 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 ZMYND10O75800 440 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 RGS20O76081 388 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 LCA5LO95447 670 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 KLRC1P26715 233 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 JAK3P52333 1124 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 MRPS25P82663 173 aaKnown RBP12.86□□□□□ -0.35
VTA1-203ENST00000452973 GHRHRQ02643 423 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 FSTL1Q12841 308 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 PAPD7Q5XG87 772 aaKnown RBP12.86□□□□□ -0.35
VTA1-203ENST00000452973 IQCEQ6IPM2 695 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 CC2D1AQ6P1N0 951 aaPredicted RBP12.86□□□□□ -0.35
VTA1-203ENST00000452973 GADL1Q6ZQY3 521 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.86□□□□□ -0.35
VTA1-203ENST00000452973 MOB2Q70IA6 237 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 COG1Q8WTW3 980 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 SYN2Q92777 582 aaPredicted RBP12.86□□□□□ -0.35
VTA1-203ENST00000452973 BORCS6Q96GS4 357 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 MOV10L1Q9BXT6 1211 aaKnown RBP12.86□□□□□ -0.35
VTA1-203ENST00000452973 HOXC10Q9NYD6 342 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 EHD2Q9NZN4 543 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 AIPL1Q9NZN9 384 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 RNF181Q9P0P0 153 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 JRKLQ9Y4A0 524 aa12.86□□□□□ -0.35
VTA1-203ENST00000452973 LRRN2O75325 713 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 GLIPR1L2Q4G1C9 344 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 SEPT14Q6ZU15 432 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 IRF2BP2Q7Z5L9 587 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 NOX5Q96PH1 765 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 PAGR1Q9BTK6 254 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 PLCB1Q9NQ66 1216 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 DBR1Q9UK59 544 aaKnown RBP12.85□□□□□ -0.35
VTA1-203ENST00000452973 PACSIN2Q9UNF0 486 aaPredicted RBP12.85□□□□□ -0.35
VTA1-203ENST00000452973 TMCO5BA8MYB1 307 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 PDE2AO00408 941 aaPredicted RBP12.85□□□□□ -0.35
VTA1-203ENST00000452973 FTCDO95954 541 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 KRT13P13646 458 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 TTLL12Q14166 644 aaPredicted RBP12.85□□□□□ -0.35
VTA1-203ENST00000452973 DPY19L2P1Q6NXN4 242 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 EEPD1Q7L9B9 569 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 SULF1Q8IWU6 871 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 C4orf19Q8IY42 314 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 KRT222Q8N1A0 295 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.85□□□□□ -0.35
VTA1-203ENST00000452973 DCPSQ96C86 337 aaKnown RBP12.85□□□□□ -0.35
VTA1-203ENST00000452973 FHDC1Q9C0D6 1143 aaPredicted RBP12.85□□□□□ -0.35
VTA1-203ENST00000452973 SIX2Q9NPC8 291 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 LUC7LQ9NQ29 371 aaKnown RBP12.85□□□□□ -0.35
VTA1-203ENST00000452973 RBBP6Q7Z6E9 1792 aaKnown RBP12.85□□□□□ -0.35
VTA1-203ENST00000452973 ZNF862O60290 1169 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 SFNP31947 248 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 GCLMP48507 274 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 C2orf54Q08AI8 447 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 BFSP1Q12934 665 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 OTUD5Q96G74 571 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 ACCSQ96QU6 501 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 GOLPH3Q9H4A6 298 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 ELP3Q9H9T3 547 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 SUGCTQ9HAC7 445 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 SEPT11Q9NVA2 429 aaKnown RBP12.85□□□□□ -0.35
VTA1-203ENST00000452973 SEPT9Q9UHD8 586 aaPredicted RBP12.85□□□□□ -0.35
VTA1-203ENST00000452973 PNMA2Q9UL42 364 aa12.85□□□□□ -0.35
VTA1-203ENST00000452973 PALMO75781 387 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 PPP1R37O75864 691 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 NOP2P46087 812 aaKnown RBP12.84□□□□□ -0.35
VTA1-203ENST00000452973 RNASE9P60153 205 aaKnown RBP12.84□□□□□ -0.35
VTA1-203ENST00000452973 MYL7Q01449 175 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 SAAL1Q96ER3 474 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 C12orf42Q96LP6 360 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 INPP4AQ96PE3 977 aaPredicted RBP12.84□□□□□ -0.35
VTA1-203ENST00000452973 JPH1Q9HDC5 661 aaPredicted RBP12.84□□□□□ -0.35
VTA1-203ENST00000452973 DNAJC12Q9UKB3 198 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 CSADQ9Y600 493 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 SNCAIPQ9Y6H5 919 aa12.84□□□□□ -0.35
VTA1-203ENST00000452973 COL11A1P12107 1806 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms