RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 BRWD1Q9NSI6 2320 aa22.27■■□□□ 1.16
COL9A3-202ENST00000452372 THEGQ9P2T0 379 aa22.27■■□□□ 1.16
COL9A3-202ENST00000452372 EFCAB14O75071 495 aa22.26■■□□□ 1.15
COL9A3-202ENST00000452372 GJB5O95377 273 aa22.26■■□□□ 1.15
COL9A3-202ENST00000452372 VTNP04004 478 aa22.26■■□□□ 1.15
COL9A3-202ENST00000452372 GHRP10912 638 aa22.26■■□□□ 1.15
COL9A3-202ENST00000452372 MUTP22033 750 aa22.26■■□□□ 1.15
COL9A3-202ENST00000452372 RFC5P40937 340 aa22.26■■□□□ 1.15
COL9A3-202ENST00000452372 DNM2P50570 870 aa22.26■■□□□ 1.15
COL9A3-202ENST00000452372 FAM173BQ6P4H8 233 aa22.26■■□□□ 1.15
COL9A3-202ENST00000452372 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.26■■□□□ 1.15
COL9A3-202ENST00000452372 ARNTL2Q8WYA1 636 aa22.26■■□□□ 1.15
COL9A3-202ENST00000452372 NACC1Q96RE7 527 aa22.26■■□□□ 1.15
COL9A3-202ENST00000452372 IFIH1Q9BYX4 1025 aaKnown RBP22.26■■□□□ 1.15
COL9A3-202ENST00000452372 DHX33Q9H6R0 707 aaKnown RBP22.26■■□□□ 1.15
COL9A3-202ENST00000452372 AKT3Q9Y243 479 aa22.26■■□□□ 1.15
COL9A3-202ENST00000452372 MICAL3Q7RTP6 2002 aa22.26■■□□□ 1.15
COL9A3-202ENST00000452372 GPR32O75388 356 aa22.25■■□□□ 1.15
COL9A3-202ENST00000452372 CDC42EP1Q00587 391 aa22.25■■□□□ 1.15
COL9A3-202ENST00000452372 BECN1Q14457 450 aa22.25■■□□□ 1.15
COL9A3-202ENST00000452372 TSHZ1Q6ZSZ6 1077 aa22.25■■□□□ 1.15
COL9A3-202ENST00000452372 PIGOQ8TEQ8 1089 aa22.25■■□□□ 1.15
COL9A3-202ENST00000452372 SLC7A3Q8WY07 619 aa22.25■■□□□ 1.15
COL9A3-202ENST00000452372 APBB2Q92870 758 aa22.25■■□□□ 1.15
COL9A3-202ENST00000452372 CDHR5Q9HBB8 845 aa22.25■■□□□ 1.15
COL9A3-202ENST00000452372 TCF20Q9UGU0 1960 aaKnown RBP22.25■■□□□ 1.15
COL9A3-202ENST00000452372 ARID2Q68CP9 1835 aa22.24■■□□□ 1.15
COL9A3-202ENST00000452372 A0A087WWV3 80 aa22.24■■□□□ 1.15
COL9A3-202ENST00000452372 VWA3AA6NCI4 1184 aa22.24■■□□□ 1.15
COL9A3-202ENST00000452372 CCT6AP40227 531 aaKnown RBP22.24■■□□□ 1.15
COL9A3-202ENST00000452372 RARRES1P49788 294 aa22.24■■□□□ 1.15
COL9A3-202ENST00000452372 CRYBB1P53674 252 aaPredicted RBP22.24■■□□□ 1.15
COL9A3-202ENST00000452372 POLGP54098 1239 aaPredicted RBP22.24■■□□□ 1.15
COL9A3-202ENST00000452372 NLRP11P59045 1033 aaKnown RBP22.24■■□□□ 1.15
COL9A3-202ENST00000452372 MRPS5P82675 430 aaKnown RBP22.24■■□□□ 1.15
COL9A3-202ENST00000452372 GRB10Q13322 594 aa22.24■■□□□ 1.15
COL9A3-202ENST00000452372 DRP2Q13474 957 aa22.24■■□□□ 1.15
COL9A3-202ENST00000452372 KIZQ2M2Z5 673 aa22.24■■□□□ 1.15
COL9A3-202ENST00000452372 RAD9AQ99638 391 aa22.24■■□□□ 1.15
COL9A3-202ENST00000452372 AGO3Q9H9G7 860 aaKnown RBP22.24■■□□□ 1.15
COL9A3-202ENST00000452372 DBR1Q9UK59 544 aaKnown RBP22.24■■□□□ 1.15
COL9A3-202ENST00000452372 GINS2Q9Y248 185 aa22.24■■□□□ 1.15
COL9A3-202ENST00000452372 CLIC4Q9Y696 253 aa22.24■■□□□ 1.15
COL9A3-202ENST00000452372 ZSCAN22P10073 491 aaPredicted RBP22.23■■□□□ 1.15
COL9A3-202ENST00000452372 GPC3P51654 580 aa22.23■■□□□ 1.15
COL9A3-202ENST00000452372 ECM1Q16610 540 aa22.23■■□□□ 1.15
COL9A3-202ENST00000452372 KRT79Q5XKE5 535 aa22.23■■□□□ 1.15
COL9A3-202ENST00000452372 POTEGQ6S5H5 508 aa22.23■■□□□ 1.15
COL9A3-202ENST00000452372 MICALL1Q8N3F8 863 aa22.23■■□□□ 1.15
COL9A3-202ENST00000452372 SNX29Q8TEQ0 813 aa22.23■■□□□ 1.15
COL9A3-202ENST00000452372 CCDC43Q96MW1 224 aaKnown RBP22.23■■□□□ 1.15
COL9A3-202ENST00000452372 ZBED2Q9BTP6 218 aa22.23■■□□□ 1.15
COL9A3-202ENST00000452372 ADAMTS10Q9H324 1103 aa22.23■■□□□ 1.15
COL9A3-202ENST00000452372 SUCLA2Q9P2R7 463 aaPredicted RBP22.23■■□□□ 1.15
COL9A3-202ENST00000452372 PP2D1A8MPX8 630 aa22.22■■□□□ 1.15
COL9A3-202ENST00000452372 GAS2O43903 313 aaKnown RBP22.22■■□□□ 1.15
COL9A3-202ENST00000452372 CDC25AP30304 524 aa22.22■■□□□ 1.15
COL9A3-202ENST00000452372 CD52P31358 61 aa22.22■■□□□ 1.15
COL9A3-202ENST00000452372 PTPAQ15257 358 aa22.22■■□□□ 1.15
COL9A3-202ENST00000452372 TMEM40Q8WWA1 233 aa22.22■■□□□ 1.15
COL9A3-202ENST00000452372 AK8Q96MA6 479 aa22.22■■□□□ 1.15
COL9A3-202ENST00000452372 PPP1R16BQ96T49 567 aa22.22■■□□□ 1.15
COL9A3-202ENST00000452372 OSMRQ99650 979 aa22.22■■□□□ 1.15
COL9A3-202ENST00000452372 MMTAG2Q9BU76 263 aaKnown RBP22.22■■□□□ 1.15
COL9A3-202ENST00000452372 PADI3Q9ULW8 664 aa22.22■■□□□ 1.15
COL9A3-202ENST00000452372 KIAA1024Q9UPX6 916 aa22.22■■□□□ 1.15
COL9A3-202ENST00000452372 LINC01553A4QN01 128 aa22.21■■□□□ 1.15
COL9A3-202ENST00000452372 RPS6KA5O75582 802 aa22.21■■□□□ 1.15
COL9A3-202ENST00000452372 DGAT1O75907 488 aa22.21■■□□□ 1.15
COL9A3-202ENST00000452372 BMP1P13497 986 aa22.21■■□□□ 1.15
COL9A3-202ENST00000452372 TFF2Q03403 129 aa22.21■■□□□ 1.15
COL9A3-202ENST00000452372 EMC2Q15006 297 aa22.21■■□□□ 1.15
COL9A3-202ENST00000452372 FAM117BQ6P1L5 589 aa22.21■■□□□ 1.15
COL9A3-202ENST00000452372 FAM43BQ6ZT52 329 aaPredicted RBP22.21■■□□□ 1.15
COL9A3-202ENST00000452372 USP28Q96RU2 1077 aa22.21■■□□□ 1.15
COL9A3-202ENST00000452372 NOC2LQ9Y3T9 749 aaKnown RBP22.21■■□□□ 1.15
COL9A3-202ENST00000452372 F13A1P00488 732 aa22.2■■□□□ 1.14
COL9A3-202ENST00000452372 ERVK-21P61565 698 aa22.2■■□□□ 1.14
COL9A3-202ENST00000452372 HTRA4P83105 476 aaPredicted RBP22.2■■□□□ 1.14
COL9A3-202ENST00000452372 PAK2Q13177 524 aa22.2■■□□□ 1.14
COL9A3-202ENST00000452372 ODR4Q5SWX8 454 aa22.2■■□□□ 1.14
COL9A3-202ENST00000452372 RHPN2Q8IUC4 686 aa22.2■■□□□ 1.14
COL9A3-202ENST00000452372 TCP11Q8WWU5 503 aa22.2■■□□□ 1.14
COL9A3-202ENST00000452372 TMEM143Q96AN5 459 aa22.2■■□□□ 1.14
COL9A3-202ENST00000452372 MTRQ99707 1265 aa22.2■■□□□ 1.14
COL9A3-202ENST00000452372 XPNPEP1Q9NQW7 623 aa22.2■■□□□ 1.14
COL9A3-202ENST00000452372 DDX19AQ9NUU7 478 aaKnown RBP22.2■■□□□ 1.14
COL9A3-202ENST00000452372 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.19■■□□□ 1.14
COL9A3-202ENST00000452372 GPR182O15218 404 aa22.19■■□□□ 1.14
COL9A3-202ENST00000452372 GTPBP6O43824 516 aaPredicted RBP22.19■■□□□ 1.14
COL9A3-202ENST00000452372 EIF4BP23588 611 aaKnown RBP22.19■■□□□ 1.14
COL9A3-202ENST00000452372 LONP1P36776 959 aaKnown RBP22.19■■□□□ 1.14
COL9A3-202ENST00000452372 CEBPZQ03701 1054 aaKnown RBP22.19■■□□□ 1.14
COL9A3-202ENST00000452372 PKP1Q13835 747 aa22.19■■□□□ 1.14
COL9A3-202ENST00000452372 FOXD4L5Q5VV16 416 aaPredicted RBP22.19■■□□□ 1.14
COL9A3-202ENST00000452372 ZNF410Q86VK4 478 aa22.19■■□□□ 1.14
COL9A3-202ENST00000452372 KCTD17Q8N5Z5 321 aa22.19■■□□□ 1.14
COL9A3-202ENST00000452372 PRPF31Q8WWY3 499 aaKnown RBP22.19■■□□□ 1.14
COL9A3-202ENST00000452372 NLRP7Q8WX94 980 aa22.19■■□□□ 1.14
COL9A3-202ENST00000452372 PSPC1Q8WXF1 523 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms