RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 CAPN6Q9Y6Q1 641 aa7.26□□□□□ -1.25
USP46-202ENST00000451218 SPTBN5Q9NRC6 3674 aaKnown RBP7.26□□□□□ -1.25
USP46-202ENST00000451218 PMM2O15305 246 aa7.26□□□□□ -1.25
USP46-202ENST00000451218 LGR5O75473 907 aa7.26□□□□□ -1.25
USP46-202ENST00000451218 PLS3P13797 630 aa7.26□□□□□ -1.25
USP46-202ENST00000451218 TRAPPC11Q7Z392 1133 aa7.26□□□□□ -1.25
USP46-202ENST00000451218 CCDC65Q8IXS2 484 aa7.26□□□□□ -1.25
USP46-202ENST00000451218 SYN2Q92777 582 aaPredicted RBP7.26□□□□□ -1.25
USP46-202ENST00000451218 NIFKQ9BYG3 293 aaKnown RBP7.26□□□□□ -1.25
USP46-202ENST00000451218 TBC1D22BQ9NU19 505 aa7.26□□□□□ -1.25
USP46-202ENST00000451218 FHOD1Q9Y613 1164 aa7.26□□□□□ -1.25
USP46-202ENST00000451218 ATP8B3O60423 1300 aa7.26□□□□□ -1.25
USP46-202ENST00000451218 GTPBP10A4D1E9 387 aaKnown RBP7.25□□□□□ -1.25
USP46-202ENST00000451218 DYNC1I1O14576 645 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 IDEP14735 1019 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 NR2F2P24468 414 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 ARL2P36404 184 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 ACTR2P61160 394 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 TPM4P67936 248 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 ZNF792Q3KQV3 632 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 UTP14CQ5TAP6 766 aaKnown RBP7.25□□□□□ -1.25
USP46-202ENST00000451218 KLHDC7AQ5VTJ3 777 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 PHLDB3Q6NSJ2 640 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 DNAAF5Q86Y56 855 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 MAP4K3Q8IVH8 894 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 CXorf38Q8TB03 319 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 ZNF516Q92618 1163 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 PARVGQ9HBI0 331 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 PKD2L1Q9P0L9 805 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 RBM47A0AV96 593 aaKnown RBP7.25□□□□□ -1.25
USP46-202ENST00000451218 TESPA1A2RU30 521 aaPredicted RBP7.25□□□□□ -1.25
USP46-202ENST00000451218 IQCF3P0C7M6 154 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 PNMA6AP0CW24 399 aaPredicted RBP7.25□□□□□ -1.25
USP46-202ENST00000451218 HOXD8P13378 290 aaPredicted RBP7.25□□□□□ -1.25
USP46-202ENST00000451218 CTGFP29279 349 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 TPD52L1Q16890 204 aaPredicted RBP7.25□□□□□ -1.25
USP46-202ENST00000451218 ERO1BQ86YB8 467 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 PALB2Q86YC2 1186 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 CHST13Q8NET6 341 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 RDM1Q8NG50 284 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 OR8K1Q8NGG5 319 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 FAM84AQ96KN4 292 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 IWS1Q96ST2 819 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 GPBP1L1Q9HC44 474 aaPredicted RBP7.25□□□□□ -1.25
USP46-202ENST00000451218 SEL1LQ9UBV2 794 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP46-202ENST00000451218 PDE2AO00408 941 aaPredicted RBP7.25□□□□□ -1.25
USP46-202ENST00000451218 CXCL11O14625 94 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 CLIC2O15247 247 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 GRIN3BO60391 1043 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 TPM2P07951 284 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 GAP43P17677 238 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 PRKCIP41743 596 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 ADAM9Q13443 819 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 HIC1Q14526 733 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 PTPN14Q15678 1187 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 CYP26C1Q6V0L0 522 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 ZNF571Q7Z3V5 609 aaPredicted RBP7.25□□□□□ -1.25
USP46-202ENST00000451218 LNX1Q8TBB1 728 aaPredicted RBP7.25□□□□□ -1.25
USP46-202ENST00000451218 SEMA4DQ92854 862 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 ZSWIM4Q9H7M6 989 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 PICK1Q9NRD5 415 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 PAXBP1Q9Y5B6 917 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 SCN10AQ9Y5Y9 1956 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 PATJQ8NI35 1801 aa7.25□□□□□ -1.25
USP46-202ENST00000451218 ZNF638Q14966 1978 aaKnown RBP7.25□□□□□ -1.25
USP46-202ENST00000451218 ZBED4O75132 1171 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 CCND2P30279 289 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 NPTX2P47972 431 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 RTP1P59025 263 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 TBC1D8BQ0IIM8 1120 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 TRAF1Q13077 416 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 SUPT20HL1Q3ZLR7 823 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 DHX37Q8IY37 1157 aaKnown RBP7.24□□□□□ -1.25
USP46-202ENST00000451218 ASAP3Q8TDY4 903 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 BRI3BPQ8WY22 251 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 PACSIN1Q9BY11 444 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 UBXN6Q9BZV1 441 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 LRRC27Q9C0I9 530 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 ANKZF1Q9H8Y5 726 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 ANKEF1Q9NU02 776 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 CEP72Q9P209 647 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 MAFGO15525 162 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 STAM2O75886 525 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 PIGRP01833 764 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 SUPT20HL2P0C7V6 817 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 PSMC5P62195 406 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 PAPD7Q5XG87 772 aaKnown RBP7.24□□□□□ -1.25
USP46-202ENST00000451218 TMTC1Q8IUR5 882 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 TMEM130Q8N3G9 435 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 OTUD5Q96G74 571 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 EPC1Q9H2F5 836 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 EPN1Q9Y6I3 576 aaPredicted RBP7.24□□□□□ -1.25
USP46-202ENST00000451218 CITO14578 2027 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 IQCEQ6IPM2 695 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 MIER3Q7Z3K6 550 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 EFCAB3Q8N7B9 438 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 NSUN6Q8TEA1 469 aaKnown RBP7.24□□□□□ -1.25
USP46-202ENST00000451218 CDK5RAP3Q96JB5 506 aa7.24□□□□□ -1.25
USP46-202ENST00000451218 GPR20Q99678 358 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms