RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 TRMT1LQ7Z2T5 733 aaKnown RBP17.98■□□□□ 0.47
SGCE-208ENST00000450385 FAM228AQ86W67 206 aa17.98■□□□□ 0.47
SGCE-208ENST00000450385 NEK9Q8TD19 979 aa17.98■□□□□ 0.47
SGCE-208ENST00000450385 OXER1Q8TDS5 423 aa17.98■□□□□ 0.47
SGCE-208ENST00000450385 HAS1Q92839 578 aa17.98■□□□□ 0.47
SGCE-208ENST00000450385 PPP2R3CQ969Q6 453 aa17.98■□□□□ 0.47
SGCE-208ENST00000450385 TRAIPQ9BWF2 469 aa17.98■□□□□ 0.47
SGCE-208ENST00000450385 GCOM2Q9BZD3 368 aaPredicted RBP17.98■□□□□ 0.47
SGCE-208ENST00000450385 NSUN3Q9H649 340 aaKnown RBP17.98■□□□□ 0.47
SGCE-208ENST00000450385 SEPT9Q9UHD8 586 aaPredicted RBP17.98■□□□□ 0.47
SGCE-208ENST00000450385 PCDHA12Q9UN75 941 aa17.98■□□□□ 0.47
SGCE-208ENST00000450385 ASAP2O43150 1006 aa17.97■□□□□ 0.47
SGCE-208ENST00000450385 SKIP12755 728 aa17.97■□□□□ 0.47
SGCE-208ENST00000450385 DARSP14868 501 aaKnown RBP17.97■□□□□ 0.47
SGCE-208ENST00000450385 UBE3AQ05086 875 aa17.97■□□□□ 0.47
SGCE-208ENST00000450385 COL19A1Q14993 1142 aa17.97■□□□□ 0.47
SGCE-208ENST00000450385 ANO5Q75V66 913 aa17.97■□□□□ 0.47
SGCE-208ENST00000450385 ADAMTS19Q8TE59 1207 aa17.97■□□□□ 0.47
SGCE-208ENST00000450385 SLC7A3Q8WY07 619 aa17.97■□□□□ 0.47
SGCE-208ENST00000450385 ZSWIM4Q9H7M6 989 aa17.97■□□□□ 0.47
SGCE-208ENST00000450385 ATP6V0A4Q9HBG4 840 aa17.97■□□□□ 0.47
SGCE-208ENST00000450385 CYP26B1Q9NR63 512 aa17.97■□□□□ 0.47
SGCE-208ENST00000450385 DAXXQ9UER7 740 aaPredicted RBP17.97■□□□□ 0.47
SGCE-208ENST00000450385 PCDHB12Q9Y5F1 795 aa17.97■□□□□ 0.47
SGCE-208ENST00000450385 FSD2A1L4K1 749 aa17.96■□□□□ 0.47
SGCE-208ENST00000450385 XRCC6P12956 609 aaKnown RBP eCLIP17.96■□□□□ 0.47
SGCE-208ENST00000450385 RFC5P40937 340 aa17.96■□□□□ 0.47
SGCE-208ENST00000450385 PCBP1Q15365 356 aaKnown RBP eCLIP17.96■□□□□ 0.47
SGCE-208ENST00000450385 MTERF2Q49AM1 385 aa17.96■□□□□ 0.47
SGCE-208ENST00000450385 PDE12Q6L8Q7 609 aaKnown RBP17.96■□□□□ 0.47
SGCE-208ENST00000450385 DIS3L2Q8IYB7 885 aaKnown RBP17.96■□□□□ 0.47
SGCE-208ENST00000450385 LRRC71Q8N4P6 559 aa17.96■□□□□ 0.47
SGCE-208ENST00000450385 GJA10Q969M2 543 aa17.96■□□□□ 0.47
SGCE-208ENST00000450385 UHRF1Q96T88 793 aaPredicted RBP17.96■□□□□ 0.47
SGCE-208ENST00000450385 UBE2ZQ9H832 354 aaPredicted RBP17.96■□□□□ 0.47
SGCE-208ENST00000450385 FAM50BQ9Y247 325 aa17.96■□□□□ 0.47
SGCE-208ENST00000450385 TCF20Q9UGU0 1960 aaKnown RBP17.96■□□□□ 0.47
SGCE-208ENST00000450385 BDP1A6H8Y1 2624 aa17.95■□□□□ 0.46
SGCE-208ENST00000450385 A0A0U1RQF3 1178 aa17.95■□□□□ 0.46
SGCE-208ENST00000450385 BTBD18B2RXH4 712 aa17.95■□□□□ 0.46
SGCE-208ENST00000450385 EML1O00423 815 aa17.95■□□□□ 0.46
SGCE-208ENST00000450385 MGEA5O60502 916 aa17.95■□□□□ 0.46
SGCE-208ENST00000450385 LYPLA2O95372 231 aa17.95■□□□□ 0.46
SGCE-208ENST00000450385 LARGE1O95461 756 aa17.95■□□□□ 0.46
SGCE-208ENST00000450385 SFPQP23246 707 aaKnown RBP eCLIP17.95■□□□□ 0.46
SGCE-208ENST00000450385 RBM25P49756 843 aaKnown RBP17.95■□□□□ 0.46
SGCE-208ENST00000450385 NR5A1Q13285 461 aa17.95■□□□□ 0.46
SGCE-208ENST00000450385 LEXMQ3ZCV2 418 aa17.95■□□□□ 0.46
SGCE-208ENST00000450385 TCP11Q8WWU5 503 aa17.95■□□□□ 0.46
SGCE-208ENST00000450385 NLRP7Q8WX94 980 aa17.95■□□□□ 0.46
SGCE-208ENST00000450385 PABPC5Q96DU9 382 aaKnown RBP17.95■□□□□ 0.46
SGCE-208ENST00000450385 FOXP1Q9H334 677 aaPredicted RBP17.95■□□□□ 0.46
SGCE-208ENST00000450385 DHX33Q9H6R0 707 aaKnown RBP17.95■□□□□ 0.46
SGCE-208ENST00000450385 GJB4Q9NTQ9 266 aa17.95■□□□□ 0.46
SGCE-208ENST00000450385 PLAGL2Q9UPG8 496 aa17.95■□□□□ 0.46
SGCE-208ENST00000450385 MRPL42Q9Y6G3 142 aaKnown RBP17.95■□□□□ 0.46
SGCE-208ENST00000450385 MYO7AQ13402 2215 aa17.95■□□□□ 0.46
SGCE-208ENST00000450385 NEMFO60524 1076 aa17.94■□□□□ 0.46
SGCE-208ENST00000450385 TFF2Q03403 129 aa17.94■□□□□ 0.46
SGCE-208ENST00000450385 SPIRE1Q08AE8 756 aa17.94■□□□□ 0.46
SGCE-208ENST00000450385 CALCRLQ16602 461 aa17.94■□□□□ 0.46
SGCE-208ENST00000450385 POTEDQ86YR6 584 aa17.94■□□□□ 0.46
SGCE-208ENST00000450385 CEP170P1Q96L14 293 aa17.94■□□□□ 0.46
SGCE-208ENST00000450385 SCLT1Q96NL6 688 aa17.94■□□□□ 0.46
SGCE-208ENST00000450385 TMEM117Q9H0C3 514 aa17.94■□□□□ 0.46
SGCE-208ENST00000450385 SUCLA2Q9P2R7 463 aaPredicted RBP17.94■□□□□ 0.46
SGCE-208ENST00000450385 YWHABP31946 246 aaKnown RBP17.93■□□□□ 0.46
SGCE-208ENST00000450385 POU5F1BQ06416 359 aa17.93■□□□□ 0.46
SGCE-208ENST00000450385 C8orf34Q49A92 452 aa17.93■□□□□ 0.46
SGCE-208ENST00000450385 EARS2Q5JPH6 523 aaKnown RBP17.93■□□□□ 0.46
SGCE-208ENST00000450385 PSPC1Q8WXF1 523 aaKnown RBP17.93■□□□□ 0.46
SGCE-208ENST00000450385 C8orf76Q96K31 380 aa17.93■□□□□ 0.46
SGCE-208ENST00000450385 MTMR9Q96QG7 549 aa17.93■□□□□ 0.46
SGCE-208ENST00000450385 HSD17B14Q9BPX1 270 aa17.93■□□□□ 0.46
SGCE-208ENST00000450385 LXNQ9BS40 222 aa17.93■□□□□ 0.46
SGCE-208ENST00000450385 ANKEF1Q9NU02 776 aa17.93■□□□□ 0.46
SGCE-208ENST00000450385 LZTS1Q9Y250 596 aa17.93■□□□□ 0.46
SGCE-208ENST00000450385 KIF3AQ9Y496 699 aa17.93■□□□□ 0.46
SGCE-208ENST00000450385 KIAA1671Q9BY89 1806 aa17.93■□□□□ 0.46
SGCE-208ENST00000450385 GRM6O15303 877 aa17.92■□□□□ 0.46
SGCE-208ENST00000450385 JAK2O60674 1132 aa17.92■□□□□ 0.46
SGCE-208ENST00000450385 SLITRK3O94933 977 aa17.92■□□□□ 0.46
SGCE-208ENST00000450385 LAG3P18627 525 aa17.92■□□□□ 0.46
SGCE-208ENST00000450385 TRAPPC10P48553 1259 aa17.92■□□□□ 0.46
SGCE-208ENST00000450385 POLGP54098 1239 aaPredicted RBP17.92■□□□□ 0.46
SGCE-208ENST00000450385 MXD4Q14582 209 aaPredicted RBP17.92■□□□□ 0.46
SGCE-208ENST00000450385 CTC1Q2NKJ3 1217 aa17.92■□□□□ 0.46
SGCE-208ENST00000450385 SRGAP1Q7Z6B7 1085 aa17.92■□□□□ 0.46
SGCE-208ENST00000450385 ECHDC2Q86YB7 292 aa17.92■□□□□ 0.46
SGCE-208ENST00000450385 RHPN2Q8IUC4 686 aa17.92■□□□□ 0.46
SGCE-208ENST00000450385 ABI1Q8IZP0 508 aa17.92■□□□□ 0.46
SGCE-208ENST00000450385 FBXO18Q8NFZ0 1043 aa17.92■□□□□ 0.46
SGCE-208ENST00000450385 SPPL3Q8TCT6 385 aa17.92■□□□□ 0.46
SGCE-208ENST00000450385 TTC12Q9H892 705 aaPredicted RBP17.92■□□□□ 0.46
SGCE-208ENST00000450385 UPF2Q9HAU5 1272 aaKnown RBP17.92■□□□□ 0.46
SGCE-208ENST00000450385 TBKBP1A7MCY6 615 aa17.91■□□□□ 0.46
SGCE-208ENST00000450385 ZNF623O75123 536 aa17.91■□□□□ 0.46
SGCE-208ENST00000450385 RAB27AP51159 221 aa17.91■□□□□ 0.46
SGCE-208ENST00000450385 RABEP1Q15276 862 aa17.91■□□□□ 0.46
SGCE-208ENST00000450385 TCEAL5Q5H9L2 206 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms