RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 H3BNC9 293 aa19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 GCFC2P16383 781 aaKnown RBP19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 TMOD1P28289 359 aa19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 TRAPPC10P48553 1259 aa19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 TBC1D8BQ0IIM8 1120 aa19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 TARBP2Q15633 366 aaKnown RBP19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 XKR3Q5GH77 459 aa19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 NPAS4Q8IUM7 802 aa19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 CRIPAKQ8N1N5 446 aa19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 HAS1Q92839 578 aa19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 FAM20AQ96MK3 541 aa19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 MAP7D2Q96T17 732 aa19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 ADAM2Q99965 735 aa19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 VAV3Q9UKW4 847 aa19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 LRFN2Q9ULH4 789 aa19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 ZDHHC9Q9Y397 364 aa19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 COL4A6Q14031 1691 aa19.08■□□□□ 0.64
PRPF40A-204ENST00000450303 DENND3A2RUS2 1198 aa19.07■□□□□ 0.64
PRPF40A-204ENST00000450303 GPR182O15218 404 aa19.07■□□□□ 0.64
PRPF40A-204ENST00000450303 LINC00271P0C7V0 271 aa19.07■□□□□ 0.64
PRPF40A-204ENST00000450303 STAG3L1P0CL83 205 aa19.07■□□□□ 0.64
PRPF40A-204ENST00000450303 KCNQ1P51787 676 aa19.07■□□□□ 0.64
PRPF40A-204ENST00000450303 DRP2Q13474 957 aa19.07■□□□□ 0.64
PRPF40A-204ENST00000450303 ATL3Q6DD88 541 aa19.07■□□□□ 0.64
PRPF40A-204ENST00000450303 NIFKQ9BYG3 293 aaKnown RBP19.07■□□□□ 0.64
PRPF40A-204ENST00000450303 ADAMTS10Q9H324 1103 aa19.07■□□□□ 0.64
PRPF40A-204ENST00000450303 BMPR1AP36894 532 aa19.06■□□□□ 0.64
PRPF40A-204ENST00000450303 SARSP49591 514 aaKnown RBP19.06■□□□□ 0.64
PRPF40A-204ENST00000450303 PSMC5P62195 406 aa19.06■□□□□ 0.64
PRPF40A-204ENST00000450303 PPP2R5CQ13362 524 aa19.06■□□□□ 0.64
PRPF40A-204ENST00000450303 ODR4Q5SWX8 454 aa19.06■□□□□ 0.64
PRPF40A-204ENST00000450303 PLA2G4FQ68DD2 849 aa19.06■□□□□ 0.64
PRPF40A-204ENST00000450303 NCAPH2Q6IBW4 605 aa19.06■□□□□ 0.64
PRPF40A-204ENST00000450303 HLA-CQ95604 372 aa19.06■□□□□ 0.64
PRPF40A-204ENST00000450303 MRPL38Q96DV4 380 aaKnown RBP19.06■□□□□ 0.64
PRPF40A-204ENST00000450303 CEP89Q96ST8 783 aa19.06■□□□□ 0.64
PRPF40A-204ENST00000450303 RGS18Q9NS28 235 aa19.06■□□□□ 0.64
PRPF40A-204ENST00000450303 MRPL42Q9Y6G3 142 aaKnown RBP19.06■□□□□ 0.64
PRPF40A-204ENST00000450303 KIAA1671Q9BY89 1806 aa19.06■□□□□ 0.64
PRPF40A-204ENST00000450303 WNT7AO00755 349 aa19.05■□□□□ 0.64
PRPF40A-204ENST00000450303 CSPG5O95196 566 aa19.05■□□□□ 0.64
PRPF40A-204ENST00000450303 FGFR4P22455 802 aa19.05■□□□□ 0.64
PRPF40A-204ENST00000450303 DEKP35659 375 aaKnown RBP19.05■□□□□ 0.64
PRPF40A-204ENST00000450303 GPC3P51654 580 aa19.05■□□□□ 0.64
PRPF40A-204ENST00000450303 ANO5Q75V66 913 aa19.05■□□□□ 0.64
PRPF40A-204ENST00000450303 SCLT1Q96NL6 688 aa19.05■□□□□ 0.64
PRPF40A-204ENST00000450303 WRAP73Q9P2S5 460 aaPredicted RBP19.05■□□□□ 0.64
PRPF40A-204ENST00000450303 CFAP45Q9UL16 551 aa19.05■□□□□ 0.64
PRPF40A-204ENST00000450303 COG5Q9UP83 839 aa19.05■□□□□ 0.64
PRPF40A-204ENST00000450303 PCDHB7Q9Y5E2 793 aa19.05■□□□□ 0.64
PRPF40A-204ENST00000450303 MYO7AQ13402 2215 aa19.05■□□□□ 0.64
PRPF40A-204ENST00000450303 C9IYK1 514 aa19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 TBX3O15119 743 aa19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 GRM6O15303 877 aa19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 CSDE1O75534 798 aaKnown RBP19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 BAG4O95429 457 aaKnown RBP19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 ATP2B1P20020 1258 aa19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 PTMSP20962 102 aa19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 QARSP47897 775 aaKnown RBP19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 NPEPPSP55786 919 aa19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 ORC2Q13416 577 aaPredicted RBP19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 PTPROQ16827 1216 aa19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 FNDC1Q4ZHG4 1894 aaPredicted RBP19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 FAM102BQ5T8I3 360 aa19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 CMTR2Q8IYT2 770 aaKnown RBP19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 ZNF579Q8NAF0 562 aaKnown RBP19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 ADAMTS19Q8TE59 1207 aa19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 NLRP7Q8WX94 980 aa19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 CLP1Q92989 425 aaKnown RBP19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 RGL1Q9NZL6 768 aa19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 ATG2AQ2TAZ0 1938 aa19.04■□□□□ 0.64
PRPF40A-204ENST00000450303 C5orf67F2Z3F1 127 aa19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 BMP15O95972 392 aa19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 RB1P06400 928 aa19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 P4HBP07237 508 aaKnown RBP19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 BMP1P13497 986 aa19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 EIF4BP23588 611 aaKnown RBP19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 KRT85P78386 507 aa19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 CTTNQ14247 550 aaKnown RBP19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 DSC3Q14574 896 aa19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 EPHA7Q15375 998 aa19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 AAK1Q2M2I8 961 aa19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 TTC38Q5R3I4 469 aa19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 SLC24A5Q71RS6 500 aa19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 DYDC2Q96IM9 177 aa19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 NECAB3Q96P71 396 aaPredicted RBP19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 ALG13Q9NP73 1137 aaKnown RBP19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 C1orf112Q9NSG2 853 aa19.03■□□□□ 0.64
PRPF40A-204ENST00000450303 BRWD1Q9NSI6 2320 aa19.02■□□□□ 0.64
PRPF40A-204ENST00000450303 TCHHQ07283 1943 aa19.02■□□□□ 0.64
PRPF40A-204ENST00000450303 A0A087WZ62 844 aa19.02■□□□□ 0.64
PRPF40A-204ENST00000450303 IGKV6-21A0A0C4DH24 114 aa19.02■□□□□ 0.64
PRPF40A-204ENST00000450303 TBKBP1A7MCY6 615 aa19.02■□□□□ 0.64
PRPF40A-204ENST00000450303 MAFO75444 373 aaPredicted RBP19.02■□□□□ 0.64
PRPF40A-204ENST00000450303 DARSP14868 501 aaKnown RBP19.02■□□□□ 0.64
PRPF40A-204ENST00000450303 DNM2P50570 870 aa19.02■□□□□ 0.64
PRPF40A-204ENST00000450303 CYP4A11Q02928 519 aa19.02■□□□□ 0.64
PRPF40A-204ENST00000450303 FOXD4L6Q3SYB3 417 aaPredicted RBP19.02■□□□□ 0.64
PRPF40A-204ENST00000450303 TCEAL5Q5H9L2 206 aa19.02■□□□□ 0.64
PRPF40A-204ENST00000450303 FOXD4L3Q6VB84 417 aaPredicted RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms